Search in sources :

Example 21 with Questionnaire

use of org.hl7.fhir.dstu3.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class QuestionnaireBuilder method processMetadata.

private void processMetadata() {
    // todo: can we derive a more informative identifier from the questionnaire if we have a profile
    if (prebuiltQuestionnaire == null) {
        questionnaire.addIdentifier().setSystem("urn:ietf:rfc:3986").setValue(questionnaireId);
        questionnaire.setVersion(profile.getVersion());
        questionnaire.setStatus(profile.getStatus());
        questionnaire.setDate(profile.getDate());
        questionnaire.setPublisher(profile.getPublisher());
        Questionnaire.QuestionnaireItemComponent item = new Questionnaire.QuestionnaireItemComponent();
        questionnaire.addItem(item);
        item.getCode().addAll(profile.getKeyword());
        questionnaire.setId(nextId("qs"));
    }
    if (response != null) {
        // no identifier - this is transient
        response.setQuestionnaire(factory.makeReference("#" + questionnaire.getId()));
        response.getContained().add(questionnaire);
        response.setStatus(QuestionnaireResponseStatus.INPROGRESS);
        QuestionnaireResponse.QuestionnaireResponseItemComponent item = new QuestionnaireResponse.QuestionnaireResponseItemComponent();
        response.addItem(item);
        item.setUserData("object", resource);
    }
}
Also used : QuestionnaireItemComponent(org.hl7.fhir.dstu3.model.Questionnaire.QuestionnaireItemComponent) Questionnaire(org.hl7.fhir.dstu3.model.Questionnaire) QuestionnaireItemComponent(org.hl7.fhir.dstu3.model.Questionnaire.QuestionnaireItemComponent) QuestionnaireResponse(org.hl7.fhir.dstu3.model.QuestionnaireResponse)

Example 22 with Questionnaire

use of org.hl7.fhir.dstu3.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class RdfParser method composeQuestionnaireQuestionnaireItemComponent.

protected void composeQuestionnaireQuestionnaireItemComponent(Complex parent, String parentType, String name, Questionnaire.QuestionnaireItemComponent element, int index) {
    if (element == null)
        return;
    Complex t;
    if (Utilities.noString(parentType))
        t = parent;
    else {
        t = parent.predicate("fhir:" + parentType + '.' + name);
    }
    composeBackboneElement(t, "item", name, element, index);
    if (element.hasLinkIdElement())
        composeString(t, "Questionnaire", "linkId", element.getLinkIdElement(), -1);
    if (element.hasDefinitionElement())
        composeUri(t, "Questionnaire", "definition", element.getDefinitionElement(), -1);
    for (int i = 0; i < element.getCode().size(); i++) composeCoding(t, "Questionnaire", "code", element.getCode().get(i), i);
    if (element.hasPrefixElement())
        composeString(t, "Questionnaire", "prefix", element.getPrefixElement(), -1);
    if (element.hasTextElement())
        composeString(t, "Questionnaire", "text", element.getTextElement(), -1);
    if (element.hasTypeElement())
        composeEnum(t, "Questionnaire", "type", element.getTypeElement(), -1);
    for (int i = 0; i < element.getEnableWhen().size(); i++) composeQuestionnaireQuestionnaireItemEnableWhenComponent(t, "Questionnaire", "enableWhen", element.getEnableWhen().get(i), i);
    if (element.hasEnableBehaviorElement())
        composeEnum(t, "Questionnaire", "enableBehavior", element.getEnableBehaviorElement(), -1);
    if (element.hasRequiredElement())
        composeBoolean(t, "Questionnaire", "required", element.getRequiredElement(), -1);
    if (element.hasRepeatsElement())
        composeBoolean(t, "Questionnaire", "repeats", element.getRepeatsElement(), -1);
    if (element.hasReadOnlyElement())
        composeBoolean(t, "Questionnaire", "readOnly", element.getReadOnlyElement(), -1);
    if (element.hasMaxLengthElement())
        composeInteger(t, "Questionnaire", "maxLength", element.getMaxLengthElement(), -1);
    if (element.hasAnswerValueSetElement())
        composeCanonical(t, "Questionnaire", "answerValueSet", element.getAnswerValueSetElement(), -1);
    for (int i = 0; i < element.getAnswerOption().size(); i++) composeQuestionnaireQuestionnaireItemAnswerOptionComponent(t, "Questionnaire", "answerOption", element.getAnswerOption().get(i), i);
    for (int i = 0; i < element.getInitial().size(); i++) composeQuestionnaireQuestionnaireItemInitialComponent(t, "Questionnaire", "initial", element.getInitial().get(i), i);
    for (int i = 0; i < element.getItem().size(); i++) composeQuestionnaireQuestionnaireItemComponent(t, "Questionnaire", "item", element.getItem().get(i), i);
}
Also used : Complex(org.hl7.fhir.r4.utils.formats.Turtle.Complex)

Example 23 with Questionnaire

use of org.hl7.fhir.dstu3.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class SimpleWorkerContext method loadFromPackageInt.

public int loadFromPackageInt(NpmPackage pi, IContextResourceLoader loader, String... types) throws FileNotFoundException, IOException, FHIRException {
    int t = 0;
    if (progress) {
        System.out.println("Load Package " + pi.name() + "#" + pi.version());
    }
    if (loadedPackages.contains(pi.id() + "#" + pi.version())) {
        return 0;
    }
    loadedPackages.add(pi.id() + "#" + pi.version());
    if ((types == null || types.length == 0) && loader != null) {
        types = loader.getTypes();
    }
    if (VersionUtilities.isR2Ver(pi.fhirVersion()) || !pi.canLazyLoad()) {
        // can't lazy load R2 because of valueset/codesystem implementation
        if (types.length == 0) {
            types = new String[] { "StructureDefinition", "ValueSet", "SearchParameter", "OperationDefinition", "Questionnaire", "ConceptMap", "StructureMap", "NamingSystem" };
        }
        for (String s : pi.listResources(types)) {
            try {
                loadDefinitionItem(s, pi.load("package", s), loader, null, new PackageVersion(pi.id(), pi.version()));
                t++;
            } catch (Exception e) {
                throw new FHIRException(formatMessage(I18nConstants.ERROR_READING__FROM_PACKAGE__, s, pi.name(), pi.version(), e.getMessage()), e);
            }
        }
    } else {
        if (types.length == 0) {
            types = new String[] { "StructureDefinition", "ValueSet", "CodeSystem", "SearchParameter", "OperationDefinition", "Questionnaire", "ConceptMap", "StructureMap", "NamingSystem", "Measures" };
        }
        for (PackageResourceInformation pri : pi.listIndexedResources(types)) {
            try {
                registerResourceFromPackage(new PackageResourceLoader(pri, loader), new PackageVersion(pi.id(), pi.version()));
                t++;
            } catch (FHIRException e) {
                throw new FHIRException(formatMessage(I18nConstants.ERROR_READING__FROM_PACKAGE__, pri.getFilename(), pi.name(), pi.version(), e.getMessage()), e);
            }
        }
    }
    for (String s : pi.list("other")) {
        binaries.put(s, TextFile.streamToBytes(pi.load("other", s)));
    }
    if (version == null) {
        version = pi.version();
    }
    return t;
}
Also used : PackageResourceInformation(org.hl7.fhir.utilities.npm.NpmPackage.PackageResourceInformation) FHIRException(org.hl7.fhir.exceptions.FHIRException) FileNotFoundException(java.io.FileNotFoundException) DataFormatException(ca.uhn.fhir.parser.DataFormatException) DefinitionException(org.hl7.fhir.exceptions.DefinitionException) IOException(java.io.IOException) FHIRException(org.hl7.fhir.exceptions.FHIRException)

Example 24 with Questionnaire

use of org.hl7.fhir.dstu3.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class BaseWorkerContext method fetchResourceWithException.

@SuppressWarnings("unchecked")
public <T extends Resource> T fetchResourceWithException(String cls, String uri, CanonicalResource source) throws FHIRException {
    if (uri == null) {
        return null;
    }
    if ("StructureDefinition".equals(cls)) {
        uri = ProfileUtilities.sdNs(uri, getOverrideVersionNs());
    }
    synchronized (lock) {
        String version = null;
        if (uri.contains("|")) {
            version = uri.substring(uri.lastIndexOf("|") + 1);
            uri = uri.substring(0, uri.lastIndexOf("|"));
        }
        if (uri.contains("#")) {
            uri = uri.substring(0, uri.indexOf("#"));
        }
        if (cls == null || "Resource".equals(cls)) {
            if (structures.has(uri)) {
                return (T) structures.get(uri, version);
            }
            if (guides.has(uri)) {
                return (T) guides.get(uri, version);
            }
            if (capstmts.has(uri)) {
                return (T) capstmts.get(uri, version);
            }
            if (measures.has(uri)) {
                return (T) measures.get(uri, version);
            }
            if (libraries.has(uri)) {
                return (T) libraries.get(uri, version);
            }
            if (valueSets.has(uri)) {
                return (T) valueSets.get(uri, version);
            }
            if (codeSystems.has(uri)) {
                return (T) codeSystems.get(uri, version);
            }
            if (operations.has(uri)) {
                return (T) operations.get(uri, version);
            }
            if (searchParameters.has(uri)) {
                return (T) searchParameters.get(uri, version);
            }
            if (plans.has(uri)) {
                return (T) plans.get(uri, version);
            }
            if (maps.has(uri)) {
                return (T) maps.get(uri, version);
            }
            if (transforms.has(uri)) {
                return (T) transforms.get(uri, version);
            }
            if (questionnaires.has(uri)) {
                return (T) questionnaires.get(uri, version);
            }
            for (Map<String, ResourceProxy> rt : allResourcesById.values()) {
                for (ResourceProxy r : rt.values()) {
                    if (uri.equals(r.getUrl())) {
                        return (T) r.getResource();
                    }
                }
            }
        } else if ("ImplementationGuide".equals(cls)) {
            return (T) guides.get(uri, version);
        } else if ("CapabilityStatement".equals(cls)) {
            return (T) capstmts.get(uri, version);
        } else if ("Measure".equals(cls)) {
            return (T) measures.get(uri, version);
        } else if ("Library".equals(cls)) {
            return (T) libraries.get(uri, version);
        } else if ("StructureDefinition".equals(cls)) {
            return (T) structures.get(uri, version);
        } else if ("StructureMap".equals(cls)) {
            return (T) transforms.get(uri, version);
        } else if ("ValueSet".equals(cls)) {
            return (T) valueSets.get(uri, version);
        } else if ("CodeSystem".equals(cls)) {
            return (T) codeSystems.get(uri, version);
        } else if ("ConceptMap".equals(cls)) {
            return (T) maps.get(uri, version);
        } else if ("PlanDefinition".equals(cls)) {
            return (T) plans.get(uri, version);
        } else if ("OperationDefinition".equals(cls)) {
            OperationDefinition od = operations.get(uri, version);
            return (T) od;
        } else if ("Questionnaire.class".equals(cls)) {
            return (T) questionnaires.get(uri, version);
        } else if ("SearchParameter.class".equals(cls)) {
            SearchParameter res = searchParameters.get(uri, version);
            return (T) res;
        }
        if ("CodeSystem".equals(cls) && codeSystems.has(uri)) {
            return (T) codeSystems.get(uri, version);
        }
        if ("ValueSet".equals(cls) && valueSets.has(uri)) {
            return (T) valueSets.get(uri, version);
        }
        if ("Questionnaire".equals(cls)) {
            return (T) questionnaires.get(uri, version);
        }
        if (cls == null) {
            if (uri.matches(Constants.URI_REGEX) && !uri.contains("ValueSet")) {
                return null;
            }
            // it might be a special URL.
            if (Utilities.isAbsoluteUrl(uri) || uri.startsWith("ValueSet/")) {
                // findTxValueSet(uri);
                Resource res = null;
                if (res != null) {
                    return (T) res;
                }
            }
            return null;
        }
        if (supportedCodeSystems.contains(uri)) {
            return null;
        }
        throw new FHIRException(formatMessage(I18nConstants.NOT_DONE_YET_CANT_FETCH_, uri));
    }
}
Also used : CanonicalResource(org.hl7.fhir.r4b.model.CanonicalResource) Resource(org.hl7.fhir.r4b.model.Resource) SearchParameter(org.hl7.fhir.r4b.model.SearchParameter) OperationDefinition(org.hl7.fhir.r4b.model.OperationDefinition) FHIRException(org.hl7.fhir.exceptions.FHIRException) CanonicalResourceProxy(org.hl7.fhir.r4b.context.CanonicalResourceManager.CanonicalResourceProxy) ResourceProxy(org.hl7.fhir.r4b.context.BaseWorkerContext.ResourceProxy)

Example 25 with Questionnaire

use of org.hl7.fhir.dstu3.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class QuestionnaireBuilder method processMetadata.

private void processMetadata() {
    // todo: can we derive a more informative identifier from the questionnaire if we have a profile
    if (prebuiltQuestionnaire == null) {
        questionnaire.addIdentifier().setSystem("urn:ietf:rfc:3986").setValue(questionnaireId);
        questionnaire.setVersion(profile.getVersion());
        questionnaire.setStatus(profile.getStatus());
        questionnaire.setDate(profile.getDate());
        questionnaire.setPublisher(profile.getPublisher());
        Questionnaire.QuestionnaireItemComponent item = new Questionnaire.QuestionnaireItemComponent();
        questionnaire.addItem(item);
        item.setLinkId("meta");
        item.getCode().addAll(profile.getKeyword());
        questionnaire.setId(nextId("qs"));
    }
    if (response != null) {
        // no identifier - this is transient
        response.setQuestionnaire("#" + questionnaire.getId());
        response.getContained().add(questionnaire);
        response.setStatus(QuestionnaireResponseStatus.INPROGRESS);
        QuestionnaireResponse.QuestionnaireResponseItemComponent item = new QuestionnaireResponse.QuestionnaireResponseItemComponent();
        response.addItem(item);
        item.setLinkId("meta");
        item.setUserData("object", resource);
    }
}
Also used : QuestionnaireItemComponent(org.hl7.fhir.r4b.model.Questionnaire.QuestionnaireItemComponent) Questionnaire(org.hl7.fhir.r4b.model.Questionnaire) QuestionnaireItemComponent(org.hl7.fhir.r4b.model.Questionnaire.QuestionnaireItemComponent) QuestionnaireResponse(org.hl7.fhir.r4b.model.QuestionnaireResponse)

Aggregations

XhtmlNode (org.hl7.fhir.utilities.xhtml.XhtmlNode)18 ArrayList (java.util.ArrayList)15 Questionnaire (org.hl7.fhir.r4.model.Questionnaire)14 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)13 QuestionnaireResponse (org.hl7.fhir.r4.model.QuestionnaireResponse)12 QuestionnaireItemComponent (org.hl7.fhir.r4b.model.Questionnaire.QuestionnaireItemComponent)11 QuestionnaireItemComponent (org.hl7.fhir.r5.model.Questionnaire.QuestionnaireItemComponent)11 File (java.io.File)10 TextFile (org.hl7.fhir.utilities.TextFile)10 Test (org.junit.jupiter.api.Test)10 FileOutputStream (java.io.FileOutputStream)9 Questionnaire (org.hl7.fhir.dstu3.model.Questionnaire)9 FHIRException (org.hl7.fhir.exceptions.FHIRException)8 QuestionnaireItemComponent (org.hl7.fhir.r4.model.Questionnaire.QuestionnaireItemComponent)8 IOException (java.io.IOException)7 Bundle (org.hl7.fhir.r4.model.Bundle)7 CanonicalType (org.hl7.fhir.r4.model.CanonicalType)7 ValueSet (org.hl7.fhir.r5.model.ValueSet)7 FileNotFoundException (java.io.FileNotFoundException)6 Extension (org.hl7.fhir.r4.model.Extension)6