Examples with NarrativeGenerator org.hl7.fhir.dstu3.utils.NarrativeGenerator used on opensource projects

Example 1 with NarrativeGenerator

use of org.hl7.fhir.dstu3.utils.NarrativeGenerator in project org.hl7.fhir.core by hapifhir.

the class CCDAConverter method addReference.

protected String addReference(DomainResource r, String title, String id) throws Exception {
    if (r.getText() == null)
        r.setText(new Narrative());
    if (r.getText().getDiv() == null) {
        r.getText().setStatus(NarrativeStatus.GENERATED);
        new NarrativeGenerator("", "", context).generate(r);
    }
    r.setMeta(new Meta().setLastUpdatedElement(InstantType.now()));
    r.setId(id);
    feed.getEntry().add(new BundleEntryComponent().setResource(r));
    return id;
}

Example 2 with NarrativeGenerator

use of org.hl7.fhir.dstu3.utils.NarrativeGenerator in project org.hl7.fhir.core by hapifhir.

the class ArgonautConverter method saveResource.

private void saveResource(Resource resource, String extraType) throws Exception {
    if (!WANT_SAVE)
        return;
    DomainResource dr = null;
    if (resource instanceof DomainResource) {
        dr = (DomainResource) resource;
        if (!dr.hasText()) {
            NarrativeGenerator generator = new NarrativeGenerator("", "", context);
            generator.generate(dr);
        }
    }
    XmlParser xparser = new XmlParser();
    xparser.setOutputStyle(OutputStyle.PRETTY);
    JsonParser jparser = new JsonParser();
    jparser.setOutputStyle(OutputStyle.PRETTY);
    ByteArrayOutputStream ba = new ByteArrayOutputStream();
    xparser.compose(ba, resource);
    ba.close();
    byte[] srcX = ba.toByteArray();
    ba = new ByteArrayOutputStream();
    jparser.compose(ba, resource);
    ba.close();
    byte[] srcJ = ba.toByteArray();
    String rn = resource.getResourceType().toString();
    if (extraType != null)
        rn = rn + extraType;
    zipX.addBytes(resource.getId() + ".xml", srcX, false);
    zipJ.addBytes(resource.getId() + ".json", srcJ, false);
    if (!zipsX.containsKey(rn)) {
        zipsX.put(rn, new ZipGenerator(Utilities.path(destFolder, "xml/type", rn + ".xml.zip")));
        zipsJ.put(rn, new ZipGenerator(Utilities.path(destFolder, "json/type", rn + ".json.zip")));
        stats.put(rn, new Stats());
    }
    zipsJ.get(rn).addBytes(resource.getId() + ".json", srcJ, false);
    zipsX.get(rn).addBytes(resource.getId() + ".xml", srcX, false);
    Stats ss = stats.get(rn);
    ss.setInstances(ss.getInstances() + 1);
    String profile = resource.getUserString("profile");
    validate(srcX, profile, resource, ss);
}

Example 3 with NarrativeGenerator

use of org.hl7.fhir.dstu3.utils.NarrativeGenerator in project org.hl7.fhir.core by hapifhir.

the class QuestionnaireBuilder method build.

public void build() throws FHIRException {
    if (profile == null)
        throw new DefinitionException("QuestionnaireBuilder.build: no profile found");
    if (resource != null)
        if (!profile.getBaseType().equals(resource.getResourceType().toString()))
            throw new DefinitionException("Wrong Type");
    if (prebuiltQuestionnaire != null)
        questionnaire = prebuiltQuestionnaire;
    else
        questionnaire = new Questionnaire();
    if (resource != null)
        response = new QuestionnaireResponse();
    processMetadata();
    List<ElementDefinition> list = new ArrayList<ElementDefinition>();
    List<QuestionnaireResponse.QuestionnaireResponseItemComponent> answerGroups = new ArrayList<QuestionnaireResponse.QuestionnaireResponseItemComponent>();
    if (resource != null)
        answerGroups.addAll(response.getItem());
    if (prebuiltQuestionnaire != null) {
        // give it a fake group to build
        Questionnaire.QuestionnaireItemComponent group = new Questionnaire.QuestionnaireItemComponent();
        group.setType(QuestionnaireItemType.GROUP);
        buildGroup(group, profile, profile.getSnapshot().getElement().get(0), list, answerGroups);
    } else
        buildGroup(questionnaire.getItem().get(0), profile, profile.getSnapshot().getElement().get(0), list, answerGroups);
// 
// NarrativeGenerator ngen = new NarrativeGenerator(context);
// ngen.generate(result);
// 
// if FResponse <> nil then
// FResponse.collapseAllContained;
}

Example 4 with NarrativeGenerator

use of org.hl7.fhir.dstu3.utils.NarrativeGenerator in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method addMarkdown.

private void addMarkdown(XhtmlNode x, String text) throws FHIRFormatError, IOException, DefinitionException {
    if (text != null) {
        // 1. custom FHIR extensions
        while (text.contains("[[[")) {
            String left = text.substring(0, text.indexOf("[[["));
            String link = text.substring(text.indexOf("[[[") + 3, text.indexOf("]]]"));
            String right = text.substring(text.indexOf("]]]") + 3);
            String url = link;
            String[] parts = link.split("\\#");
            StructureDefinition p = context.fetchResource(StructureDefinition.class, parts[0]);
            if (p == null)
                p = context.fetchTypeDefinition(parts[0]);
            if (p == null)
                p = context.fetchResource(StructureDefinition.class, link);
            if (p != null) {
                url = p.getUserString("path");
                if (url == null)
                    url = p.getUserString("filename");
            } else
                throw new DefinitionException("Unable to resolve markdown link " + link);
            text = left + "[" + link + "](" + url + ")" + right;
        }
        // 2. markdown
        String s = new MarkDownProcessor(Dialect.DARING_FIREBALL).process(Utilities.escapeXml(text), "NarrativeGenerator");
        XhtmlParser p = new XhtmlParser();
        XhtmlNode m = p.parse("<div>" + s + "</div>", "div");
        x.getChildNodes().addAll(m.getChildNodes());
    }
}

Example 5 with NarrativeGenerator

use of org.hl7.fhir.dstu3.utils.NarrativeGenerator in project org.hl7.fhir.core by hapifhir.

the class QuestionnaireBuilder method build.

public void build() throws FHIRException {
    if (profile == null)
        throw new DefinitionException("QuestionnaireBuilder.build: no profile found");
    if (resource != null)
        if (!profile.getType().equals(resource.getResourceType().toString()))
            throw new DefinitionException("Wrong Type");
    if (prebuiltQuestionnaire != null)
        questionnaire = prebuiltQuestionnaire;
    else
        questionnaire = new Questionnaire();
    if (resource != null)
        response = new QuestionnaireResponse();
    processMetadata();
    List<ElementDefinition> list = new ArrayList<ElementDefinition>();
    List<QuestionnaireResponse.QuestionnaireResponseItemComponent> answerGroups = new ArrayList<QuestionnaireResponse.QuestionnaireResponseItemComponent>();
    if (resource != null)
        answerGroups.addAll(response.getItem());
    if (prebuiltQuestionnaire != null) {
        // give it a fake group to build
        Questionnaire.QuestionnaireItemComponent group = new Questionnaire.QuestionnaireItemComponent();
        group.setType(QuestionnaireItemType.GROUP);
        buildGroup(group, profile, profile.getSnapshot().getElement().get(0), list, answerGroups);
    } else
        buildGroup(questionnaire.getItem().get(0), profile, profile.getSnapshot().getElement().get(0), list, answerGroups);
// 
// NarrativeGenerator ngen = new NarrativeGenerator(context);
// ngen.generate(result);
// 
// if FResponse <> nil then
// FResponse.collapseAllContained;
}