Examples with MeasureReport org.hl7.fhir.r4.model.MeasureReport used on opensource projects

Example 16 with MeasureReport

use of org.hl7.fhir.r4.model.MeasureReport in project quality-measure-and-cohort-service by Alvearie.

the class MeasureSupplementalDataEvaluationTest method testProcessAccumulators.

@Test
public void testProcessAccumulators() {
    Map<String, Map<String, Integer>> sdeAccumulators = getSexSDEAccumulators();
    MeasureReport report = new MeasureReport();
    MeasureSupplementalDataEvaluation.processAccumulators(report, sdeAccumulators, true, new ArrayList<>());
    assertNotNull(report);
    // EvaluatedResource should contain a reference to an observation record created for supplemental data
    assertEquals(1, report.getEvaluatedResource().size());
    // The observation record mentioned previously should exist within the contained resources of the measure report
    assertEquals(1, report.getContained().size());
    assertTrue(report.getContained().get(0) instanceof Observation);
    Observation obs = (Observation) report.getContained().get(0);
    // For a single patient, the code of the observation should be the supplemental data text
    assertEquals(MeasureSupplementalDataEvaluation.SDE_SEX, obs.getCode().getText());
    // For a single patient, the value of the observation should be the result of the appropriate define
    assertTrue(obs.getValue() instanceof CodeableConcept);
    assertEquals(MALE_CODE, ((CodeableConcept) obs.getValue()).getCoding().get(0).getCode());
    // Within the observation, there should be 1 extension, with two further nested extensions
    Extension obsExt = obs.getExtensionByUrl(MeasureSupplementalDataEvaluation.CQF_MEASUREINFO_URL);
    assertNotNull(obsExt);
    assertEquals(2, obsExt.getExtension().size());
    Extension measureNestedExt = obsExt.getExtensionByUrl(MeasureSupplementalDataEvaluation.MEASURE);
    assertTrue(measureNestedExt.getValue() instanceof CanonicalType);
    assertEquals(MeasureSupplementalDataEvaluation.CQFMEASURES_URL + report.getMeasure(), ((CanonicalType) measureNestedExt.getValue()).asStringValue());
    Extension populationNestedExt = obsExt.getExtensionByUrl(MeasureSupplementalDataEvaluation.POPULATION_ID);
    assertEquals(MeasureSupplementalDataEvaluation.SDE_SEX, ((StringType) populationNestedExt.getValue()).asStringValue());
}

Example 17 with MeasureReport

use of org.hl7.fhir.r4.model.MeasureReport in project quality-measure-and-cohort-service by Alvearie.

the class CDMMeasureEvaluationTest method testSetReportMeasureToMeasureId__measureFromBundleWithoutMetaVersion__onlyMeasurePortionWithoutHistoryOnReport.

@Test
public void testSetReportMeasureToMeasureId__measureFromBundleWithoutMetaVersion__onlyMeasurePortionWithoutHistoryOnReport() {
    MeasureReport report = new MeasureReport();
    String bundleInput = "{\"resourceType\":\"Bundle\",\"id\":\"98765\",\"entry\":[{\"fullUrl\":\"https://full-url-to/fhir-server/api/v4/Measure/id1\",\"resource\":{\"resourceType\":\"Measure\",\"id\":\"id1\"}}]}";
    Measure measure = (Measure) fhirParser.parseResource(Bundle.class, bundleInput).getEntryFirstRep().getResource();
    CDMMeasureEvaluation.setReportMeasureToMeasureId(report, measure);
    assertEquals("Measure/id1", report.getMeasure());
}

Example 18 with MeasureReport

use of org.hl7.fhir.r4.model.MeasureReport in project quality-measure-and-cohort-service by Alvearie.

the class CDMMeasureEvaluationTest method testSetReportMeasureToMeasureId__noMetaVersion__noHistoryInMeasureOnReport.

@Test
public void testSetReportMeasureToMeasureId__noMetaVersion__noHistoryInMeasureOnReport() {
    MeasureReport report = new MeasureReport();
    String measureInput = "{\"resourceType\":\"Measure\",\"id\":\"id1\"}";
    Measure measure = fhirParser.parseResource(Measure.class, measureInput);
    CDMMeasureEvaluation.setReportMeasureToMeasureId(report, measure);
    assertEquals("Measure/id1", report.getMeasure());
}

Example 19 with MeasureReport

use of org.hl7.fhir.r4.model.MeasureReport in project quality-measure-and-cohort-service by Alvearie.

the class CDMMeasureEvaluationTest method testSetReportMeasureToMeasureId__includesMetaVersion__hasHistoryInMeasureOnReport.

@Test
public void testSetReportMeasureToMeasureId__includesMetaVersion__hasHistoryInMeasureOnReport() {
    MeasureReport report = new MeasureReport();
    String measureInput = "{\"resourceType\":\"Measure\",\"id\":\"id1\",\"meta\":{\"versionId\":\"2\"}}";
    Measure measure = fhirParser.parseResource(Measure.class, measureInput);
    CDMMeasureEvaluation.setReportMeasureToMeasureId(report, measure);
    assertEquals("Measure/id1/_history/2", report.getMeasure());
}

Example 20 with MeasureReport

use of org.hl7.fhir.r4.model.MeasureReport in project quality-measure-and-cohort-service by Alvearie.

the class CDMMeasureEvaluationTest method testDefinesOnMeasureReport.

@Test
public void testDefinesOnMeasureReport() {
    MeasureReport report = new MeasureReport();
    Map<VersionedIdentifier, Map<String, Object>> expectedResults = setupTestExpectedResultsContext();
    CDMContext defineContext = setupTestDefineContext(expectedResults);
    CDMMeasureEvaluation.addDefineEvaluationToReport(report, defineContext, DefineReturnOptions.ALL);
    assertEquals(5, report.getExtension().size());
    int index = 0;
    for (Entry<VersionedIdentifier, Map<String, Object>> expectedLibraryResults : expectedResults.entrySet()) {
        for (Entry<String, Object> defineResult : expectedLibraryResults.getValue().entrySet()) {
            Extension extension = report.getExtension().get(index++);
            assertEquals(MeasureEvidenceHelper.createEvidenceKey(expectedLibraryResults.getKey(), defineResult.getKey()), extension.getExtensionByUrl(CDMConstants.EVIDENCE_TEXT_URL).getValue().primitiveValue());
            // hack because Type does not return equals for 2 identical objects :(
            Type returnType = extension.getExtensionByUrl(CDMConstants.EVIDENCE_VALUE_URL).getValue();
            if (defineResult.getValue() instanceof Boolean) {
                assertTrue(returnType.isBooleanPrimitive());
                assertEquals(defineResult.getValue(), ((BooleanType) returnType).booleanValue());
            } else if (defineResult.getValue() instanceof String) {
                assertTrue(returnType.isPrimitive());
                assertEquals(defineResult.getValue(), returnType.primitiveValue());
            } else if (defineResult.getValue() instanceof DomainResource) {
                assertTrue(returnType instanceof Reference);
            }
        }
    }
}