Examples with CodeParameter com.ibm.cohort.cql.evaluation.parameters.CodeParameter used on opensource projects

Example 1 with CodeParameter

use of com.ibm.cohort.cql.evaluation.parameters.CodeParameter in project quality-measure-and-cohort-service by Alvearie.

the class ParameterHelper method resolveCodeParameter.

/**
 * Decode command-line encoded parameter
 *
 * @param value encoded parameter value
 * @return decoded parameter value
 */
public static CodeParameter resolveCodeParameter(String value) {
    CodeParameter typedValue;
    String[] parts;
    parts = value.trim().split(":");
    typedValue = new CodeParameter().setValue(parts[0]).setSystem(parts[1]).setDisplay(parts[2]);
    return typedValue;
}

Example 2 with CodeParameter

use of com.ibm.cohort.cql.evaluation.parameters.CodeParameter in project quality-measure-and-cohort-service by Alvearie.

the class R4ParameterDefinitionWithDefaultToCohortParameterConverterTest method testCoding__shouldReturnCodeParameter.

@Test
public void testCoding__shouldReturnCodeParameter() {
    ParameterDefinition parameterDefinition = getBaseParameterDefinition("Coding");
    Coding fhirValue = makeCoding("sys", "val", "dis", "ver");
    parameterDefinition.addExtension(CDMConstants.PARAMETER_DEFAULT_URL, fhirValue);
    CodeParameter expectedParameter = new CodeParameter().setSystem("sys").setValue("val").setDisplay("dis").setVersion("ver");
    assertEquals(expectedParameter, R4ParameterDefinitionWithDefaultToCohortParameterConverter.toCohortParameter(parameterDefinition));
}

Example 3 with CodeParameter

use of com.ibm.cohort.cql.evaluation.parameters.CodeParameter in project quality-measure-and-cohort-service by Alvearie.

the class ParameterHelperTest method testResolveCodeParameter.

@Test
public void testResolveCodeParameter() {
    Map<String, Parameter> params = ParameterHelper.parseParameterArguments(Arrays.asList("test:code:1.2.3:SNOMEDCT:Hernia"));
    assertEquals(1, params.size());
    CodeParameter p = (CodeParameter) params.get("test");
    assertNotNull("Parameter with expected name not found", p);
    assertEquals("Unexpected value", "1.2.3", p.getValue());
    assertEquals("Unexpected value", "SNOMEDCT", p.getSystem());
    assertEquals("Unexpected value", "Hernia", p.getDisplay());
}

Example 4 with CodeParameter

use of com.ibm.cohort.cql.evaluation.parameters.CodeParameter in project quality-measure-and-cohort-service by Alvearie.

the class MeasureEvaluatorTest method measure_report_generated___named_parameters_on_measure_report.

@Test
public void measure_report_generated___named_parameters_on_measure_report() throws Exception {
    CapabilityStatement metadata = getCapabilityStatement();
    mockFhirResourceRetrieval("/metadata?_format=json", metadata);
    Patient patient = getPatient("123", AdministrativeGender.MALE, "1970-10-10");
    mockFhirResourceRetrieval(patient);
    Library library = mockLibraryRetrieval("TestDummyPopulations", DEFAULT_VERSION, "cql/fhir-measure/test-dummy-populations.xml", ELM_MIME_TYPE);
    Measure measure = getCohortMeasure("CohortMeasureName", library, INITIAL_POPULATION);
    mockFhirResourceRetrieval(measure);
    Map<String, Parameter> parameterMap = new HashMap<>();
    parameterMap.put("integerParam", new IntegerParameter(1));
    parameterMap.put("decimalParam", new DecimalParameter("1.0"));
    parameterMap.put("stringParam", new StringParameter("1"));
    parameterMap.put("booleanParam", new BooleanParameter(false));
    parameterMap.put("datetimeParam", new DatetimeParameter("2020-01-01"));
    parameterMap.put("dateParam", new DateParameter("2020-01-01"));
    parameterMap.put("timeParam", new TimeParameter("01:00:00"));
    parameterMap.put("quantityParam", new QuantityParameter("1.0", "ml"));
    parameterMap.put("ratioParam", new RatioParameter(new QuantityParameter("1.0", "ml"), new QuantityParameter("2.0", "ml")));
    parameterMap.put("codeParam", new CodeParameter("1", "2", "3", "4"));
    parameterMap.put("conceptParam", new ConceptParameter("1", new CodeParameter("1", "2", "3", "4")));
    parameterMap.put("datetimeIntervalParam", new IntervalParameter(new DatetimeParameter("2020-01-01"), true, new DatetimeParameter("2021-01-01"), true));
    parameterMap.put("quantityIntervalParam", new IntervalParameter(new QuantityParameter("1.0", "ml"), true, new QuantityParameter("2.0", "ml"), true));
    MeasureReport report = evaluator.evaluatePatientMeasure(measure.getId(), patient.getId(), parameterMap);
    assertNotNull(report);
    List<String> parameterNames = report.getExtension().stream().filter(x -> x.getUrl().equals(MEASURE_PARAMETER_VALUE_URL)).map(x -> (ParameterDefinition) x.getValue()).map(ParameterDefinition::getName).collect(Collectors.toList());
    // Expected parameters are the ones listed above, plus the special parameters
    // measurement period and product line
    assertEquals(parameterMap.size() + 2, parameterNames.size());
    assertTrue(parameterNames.containsAll(parameterMap.keySet()));
    assertTrue(parameterNames.contains(CDMConstants.MEASUREMENT_PERIOD));
    assertTrue(parameterNames.contains(CDMConstants.PRODUCT_LINE));
}

Example 5 with CodeParameter

use of com.ibm.cohort.cql.evaluation.parameters.CodeParameter in project quality-measure-and-cohort-service by Alvearie.

the class R4ParameterDefinitionWithDefaultToCohortParameterConverterTest method testCodeableConcept__shouldReturnConceptParameter.

@Test
public void testCodeableConcept__shouldReturnConceptParameter() {
    ParameterDefinition parameterDefinition = getBaseParameterDefinition("CodeableConcept");
    CodeableConcept fhirValue = new CodeableConcept();
    fhirValue.setText("plainText");
    fhirValue.addCoding(makeCoding("s1", "val1", "d1", "ver1"));
    fhirValue.addCoding(makeCoding("s2", "val2", "d2", "ver2"));
    parameterDefinition.addExtension(CDMConstants.PARAMETER_DEFAULT_URL, fhirValue);
    List<CodeParameter> expectedCodeParameters = new ArrayList<>();
    expectedCodeParameters.add(new CodeParameter().setSystem("s1").setValue("val1").setDisplay("d1").setVersion("ver1"));
    expectedCodeParameters.add(new CodeParameter().setSystem("s2").setValue("val2").setDisplay("d2").setVersion("ver2"));
    ConceptParameter expectedParameter = new ConceptParameter().setDisplay("plainText");
    expectedParameter.setCodes(expectedCodeParameters);
    assertEquals(expectedParameter, R4ParameterDefinitionWithDefaultToCohortParameterConverter.toCohortParameter(parameterDefinition));
}