Examples with QuantityParameter com.ibm.cohort.cql.evaluation.parameters.QuantityParameter used on opensource projects

Example 1 with QuantityParameter

use of com.ibm.cohort.cql.evaluation.parameters.QuantityParameter in project quality-measure-and-cohort-service by Alvearie.

the class ParameterHelperTest method testResolveQuantityParameter.

@Test
public void testResolveQuantityParameter() {
    Map<String, Parameter> params = ParameterHelper.parseParameterArguments(Arrays.asList("test:quantity:100:mg/mL"));
    assertEquals(1, params.size());
    QuantityParameter p = (QuantityParameter) params.get("test");
    assertNotNull("Parameter with expected name not found", p);
    assertEquals("Unexpected value", "100", p.getAmount().toString());
    assertEquals("Unexpected value", "mg/mL", p.getUnit().toString());
}

Example 2 with QuantityParameter

use of com.ibm.cohort.cql.evaluation.parameters.QuantityParameter in project quality-measure-and-cohort-service by Alvearie.

the class ParameterHelper method resolveQuantityParameter.

/**
 * Decode command-line encoded parameter
 *
 * @param value encoded parameter value
 * @return decoded parameter value
 */
public static QuantityParameter resolveQuantityParameter(String value) {
    QuantityParameter typedValue;
    String[] parts;
    parts = value.trim().split(":");
    typedValue = new QuantityParameter().setAmount(parts[0]).setUnit(parts[1]);
    return typedValue;
}

Example 3 with QuantityParameter

use of com.ibm.cohort.cql.evaluation.parameters.QuantityParameter in project quality-measure-and-cohort-service by Alvearie.

the class R4ParameterDefinitionWithDefaultToCohortParameterConverterTest method testRange__shouldReturnIntervalParameterOfQuantityParameter.

@Test
public void testRange__shouldReturnIntervalParameterOfQuantityParameter() {
    ParameterDefinition parameterDefinition = getBaseParameterDefinition("Range");
    String lowString = "1.5";
    String highString = "2.5";
    BigDecimal lowValue = new BigDecimal(lowString);
    BigDecimal highValue = new BigDecimal(highString);
    String unit = "ml";
    Range fhirValue = new Range().setLow(new org.hl7.fhir.r4.model.Quantity().setValue(lowValue).setUnit(unit)).setHigh(new org.hl7.fhir.r4.model.Quantity().setValue(highValue).setUnit(unit));
    parameterDefinition.addExtension(CDMConstants.PARAMETER_DEFAULT_URL, fhirValue);
    IntervalParameter expectedParameter = new IntervalParameter(new QuantityParameter().setUnit(unit).setAmount(lowString), true, new QuantityParameter().setUnit(unit).setAmount(highString), true);
    assertEquals(expectedParameter, R4ParameterDefinitionWithDefaultToCohortParameterConverter.toCohortParameter(parameterDefinition));
}

Example 4 with QuantityParameter

use of com.ibm.cohort.cql.evaluation.parameters.QuantityParameter in project quality-measure-and-cohort-service by Alvearie.

the class ParameterHelperTest method testResolveIntervalQuantityParameter.

@Test
public void testResolveIntervalQuantityParameter() {
    Map<String, Parameter> params = ParameterHelper.parseParameterArguments(Arrays.asList("test:interval:quantity,10:mg/mL,20:mg/mL"));
    assertEquals(1, params.size());
    IntervalParameter p = (IntervalParameter) params.get("test");
    assertEquals("10", ((QuantityParameter) p.getStart()).getAmount());
    assertEquals("mg/mL", ((QuantityParameter) p.getStart()).getUnit());
    assertEquals("20", ((QuantityParameter) p.getEnd()).getAmount());
    assertEquals("mg/mL", ((QuantityParameter) p.getEnd()).getUnit());
}

Example 5 with QuantityParameter

use of com.ibm.cohort.cql.evaluation.parameters.QuantityParameter in project quality-measure-and-cohort-service by Alvearie.

the class MeasureEvaluatorTest method measure_report_generated___named_parameters_on_measure_report.

@Test
public void measure_report_generated___named_parameters_on_measure_report() throws Exception {
    CapabilityStatement metadata = getCapabilityStatement();
    mockFhirResourceRetrieval("/metadata?_format=json", metadata);
    Patient patient = getPatient("123", AdministrativeGender.MALE, "1970-10-10");
    mockFhirResourceRetrieval(patient);
    Library library = mockLibraryRetrieval("TestDummyPopulations", DEFAULT_VERSION, "cql/fhir-measure/test-dummy-populations.xml", ELM_MIME_TYPE);
    Measure measure = getCohortMeasure("CohortMeasureName", library, INITIAL_POPULATION);
    mockFhirResourceRetrieval(measure);
    Map<String, Parameter> parameterMap = new HashMap<>();
    parameterMap.put("integerParam", new IntegerParameter(1));
    parameterMap.put("decimalParam", new DecimalParameter("1.0"));
    parameterMap.put("stringParam", new StringParameter("1"));
    parameterMap.put("booleanParam", new BooleanParameter(false));
    parameterMap.put("datetimeParam", new DatetimeParameter("2020-01-01"));
    parameterMap.put("dateParam", new DateParameter("2020-01-01"));
    parameterMap.put("timeParam", new TimeParameter("01:00:00"));
    parameterMap.put("quantityParam", new QuantityParameter("1.0", "ml"));
    parameterMap.put("ratioParam", new RatioParameter(new QuantityParameter("1.0", "ml"), new QuantityParameter("2.0", "ml")));
    parameterMap.put("codeParam", new CodeParameter("1", "2", "3", "4"));
    parameterMap.put("conceptParam", new ConceptParameter("1", new CodeParameter("1", "2", "3", "4")));
    parameterMap.put("datetimeIntervalParam", new IntervalParameter(new DatetimeParameter("2020-01-01"), true, new DatetimeParameter("2021-01-01"), true));
    parameterMap.put("quantityIntervalParam", new IntervalParameter(new QuantityParameter("1.0", "ml"), true, new QuantityParameter("2.0", "ml"), true));
    MeasureReport report = evaluator.evaluatePatientMeasure(measure.getId(), patient.getId(), parameterMap);
    assertNotNull(report);
    List<String> parameterNames = report.getExtension().stream().filter(x -> x.getUrl().equals(MEASURE_PARAMETER_VALUE_URL)).map(x -> (ParameterDefinition) x.getValue()).map(ParameterDefinition::getName).collect(Collectors.toList());
    // Expected parameters are the ones listed above, plus the special parameters
    // measurement period and product line
    assertEquals(parameterMap.size() + 2, parameterNames.size());
    assertTrue(parameterNames.containsAll(parameterMap.keySet()));
    assertTrue(parameterNames.contains(CDMConstants.MEASUREMENT_PERIOD));
    assertTrue(parameterNames.contains(CDMConstants.PRODUCT_LINE));
}