Search in sources :

Example 96 with Parameters

use of org.hl7.fhir.r4.model.Parameters in project org.hl7.fhir.core by hapifhir.

the class ValueSetExpanderSimple method doServerIncludeCodes.

private void doServerIncludeCodes(ConceptSetComponent inc, boolean heirarchical, List<ValueSetExpansionParameterComponent> params, List<ValueSet> imports, Parameters expParams) throws FHIRException {
    ValueSetExpansionOutcome vso = context.expandVS(inc, heirarchical);
    if (vso.getError() != null)
        throw new TerminologyServiceException("Unable to expand imported value set: " + vso.getError());
    ValueSet vs = vso.getValueset();
    if (vs.hasVersion())
        if (!existsInParams(params, "version", new UriType(vs.getUrl() + "|" + vs.getVersion())))
            params.add(new ValueSetExpansionParameterComponent().setName("version").setValue(new UriType(vs.getUrl() + "|" + vs.getVersion())));
    for (ValueSetExpansionParameterComponent p : vso.getValueset().getExpansion().getParameter()) {
        if (!existsInParams(params, p.getName(), p.getValue()))
            params.add(p);
    }
    for (ValueSetExpansionContainsComponent cc : vs.getExpansion().getContains()) {
        addCodeAndDescendents(cc, null, expParams, imports);
    }
}
Also used : ValueSetExpansionContainsComponent(org.hl7.fhir.r4.model.ValueSet.ValueSetExpansionContainsComponent) ValueSetExpansionParameterComponent(org.hl7.fhir.r4.model.ValueSet.ValueSetExpansionParameterComponent) NoTerminologyServiceException(org.hl7.fhir.exceptions.NoTerminologyServiceException) TerminologyServiceException(org.hl7.fhir.exceptions.TerminologyServiceException) ValueSet(org.hl7.fhir.r4.model.ValueSet) UriType(org.hl7.fhir.r4.model.UriType)

Example 97 with Parameters

use of org.hl7.fhir.r4.model.Parameters in project org.hl7.fhir.core by hapifhir.

the class ValueSetExpanderSimple method makeDefaultExpansion.

private Parameters makeDefaultExpansion() {
    Parameters res = new Parameters();
    res.addParameter("excludeNested", true);
    res.addParameter("includeDesignations", false);
    return res;
}
Also used : Parameters(org.hl7.fhir.r4.model.Parameters)

Example 98 with Parameters

use of org.hl7.fhir.r4.model.Parameters in project org.hl7.fhir.core by hapifhir.

the class ValueSetExpanderSimple method addCodeAndDescendents.

private void addCodeAndDescendents(CodeSystem cs, String system, ConceptDefinitionComponent def, ValueSetExpansionContainsComponent parent, Parameters expParams, List<ValueSet> filters, ConceptDefinitionComponent exclusion) throws FHIRException {
    def.checkNoModifiers("Code in Code System", "expanding");
    if (exclusion != null) {
        if (exclusion.getCode().equals(def.getCode()))
            // excluded.
            return;
    }
    if (!CodeSystemUtilities.isDeprecated(cs, def)) {
        ValueSetExpansionContainsComponent np = null;
        boolean abs = CodeSystemUtilities.isNotSelectable(cs, def);
        boolean inc = CodeSystemUtilities.isInactive(cs, def);
        if (canBeHeirarchy || !abs)
            np = addCode(system, def.getCode(), def.getDisplay(), parent, def.getDesignation(), expParams, abs, inc, filters);
        for (ConceptDefinitionComponent c : def.getConcept()) addCodeAndDescendents(cs, system, c, np, expParams, filters, exclusion);
    } else {
        for (ConceptDefinitionComponent c : def.getConcept()) addCodeAndDescendents(cs, system, c, null, expParams, filters, exclusion);
    }
}
Also used : ValueSetExpansionContainsComponent(org.hl7.fhir.r4.model.ValueSet.ValueSetExpansionContainsComponent) ConceptDefinitionComponent(org.hl7.fhir.r4.model.CodeSystem.ConceptDefinitionComponent)

Example 99 with Parameters

use of org.hl7.fhir.r4.model.Parameters in project org.hl7.fhir.core by hapifhir.

the class ValueSetExpanderSimple method includeCodes.

private void includeCodes(ConceptSetComponent inc, List<ValueSetExpansionParameterComponent> params, Parameters expParams, boolean heirarchical) throws ETooCostly, FileNotFoundException, IOException, FHIRException {
    inc.checkNoModifiers("Compose.include", "expanding");
    List<ValueSet> imports = new ArrayList<ValueSet>();
    for (UriType imp : inc.getValueSet()) {
        imports.add(importValueSet(imp.getValue(), params, expParams));
    }
    if (!inc.hasSystem()) {
        if (// though this is not supposed to be the case
        imports.isEmpty())
            return;
        ValueSet base = imports.get(0);
        imports.remove(0);
        base.checkNoModifiers("Imported ValueSet", "expanding");
        copyImportContains(base.getExpansion().getContains(), null, expParams, imports);
    } else {
        CodeSystem cs = context.fetchCodeSystem(inc.getSystem());
        if ((cs == null || cs.getContent() != CodeSystemContentMode.COMPLETE)) {
            doServerIncludeCodes(inc, heirarchical, params, imports, expParams);
        } else {
            doInternalIncludeCodes(inc, params, expParams, imports, cs);
        }
    }
}
Also used : ArrayList(java.util.ArrayList) ValueSet(org.hl7.fhir.r4.model.ValueSet) CodeSystem(org.hl7.fhir.r4.model.CodeSystem) UriType(org.hl7.fhir.r4.model.UriType)

Example 100 with Parameters

use of org.hl7.fhir.r4.model.Parameters in project org.hl7.fhir.core by hapifhir.

the class ValueSetExpanderSimple method addCodeAndDescendents.

private void addCodeAndDescendents(ValueSetExpansionContainsComponent focus, ValueSetExpansionContainsComponent parent, Parameters expParams, List<ValueSet> filters) throws FHIRException {
    focus.checkNoModifiers("Expansion.contains", "expanding");
    ValueSetExpansionContainsComponent np = addCode(focus.getSystem(), focus.getCode(), focus.getDisplay(), parent, convert(focus.getDesignation()), expParams, focus.getAbstract(), focus.getInactive(), filters);
    for (ValueSetExpansionContainsComponent c : focus.getContains()) addCodeAndDescendents(focus, np, expParams, filters);
}
Also used : ValueSetExpansionContainsComponent(org.hl7.fhir.r4.model.ValueSet.ValueSetExpansionContainsComponent)

Aggregations

Parameters (org.hl7.fhir.r4.model.Parameters)105 Test (org.junit.jupiter.api.Test)96 SpringBootTest (org.springframework.boot.test.context.SpringBootTest)71 StringType (org.hl7.fhir.r4.model.StringType)68 RestIntegrationTest (org.opencds.cqf.ruler.test.RestIntegrationTest)61 HashMap (java.util.HashMap)58 ArrayList (java.util.ArrayList)53 FHIRException (org.hl7.fhir.exceptions.FHIRException)48 IOException (java.io.IOException)44 Parameters (org.hl7.fhir.dstu3.model.Parameters)41 Bundle (org.hl7.fhir.r4.model.Bundle)34 Measure (org.hl7.fhir.r4.model.Measure)31 Path (javax.ws.rs.Path)25 Produces (javax.ws.rs.Produces)25 Patient (org.hl7.fhir.r4.model.Patient)25 FileNotFoundException (java.io.FileNotFoundException)24 List (java.util.List)24 JsonObject (javax.json.JsonObject)23 GET (javax.ws.rs.GET)23 ExtraParameters (org.apache.camel.component.fhir.api.ExtraParameters)23