Examples with Quantity org.hl7.fhir.r4.model.Quantity used on opensource projects

Example 16 with Quantity

use of org.hl7.fhir.r4.model.Quantity in project hl7v2-fhir-converter by LinuxForHealth.

the class Hl7MedicationRequestFHIRConversionTest method dosageInstructionTestRateQuantityRXE.

@Test
void dosageInstructionTestRateQuantityRXE() {
    // Test dosageInstruction.rateQuantity where RXE.23 exists and RXE.22 does not exist -> use RXE segment, no range
    String hl7message = "MSH|^~\\&||||||S1|RDE^O11||T|2.6|||||||||\n" + "PID|||1234^^^^MR||DOE^JANE^|||F||||||||||||||||||||||\n" + "ORC|NW|||||E|||||||||||||||||||||||I\n" + "RXE||DUONEB3INH^3 ML PLAS CONT : IPRATROPIUM-ALBUTEROL 0.5-2.5 (3) MG/3ML IN SOLN^ADS|||||||||||||||||||" + // RXE.24.3 purposely empty to check that default system is used
    "||7|PC^^http://unitsofmeasure.org||||||||||||||||\n";
    List<BundleEntryComponent> e = ResourceUtils.createFHIRBundleFromHL7MessageReturnEntryList(ftv, hl7message);
    List<Resource> medicationRequestList = ResourceUtils.getResourceList(e, ResourceType.MedicationRequest);
    // Confirm that one medicationRequest was created.
    assertThat(medicationRequestList).hasSize(1);
    MedicationRequest medicationRequest = ResourceUtils.getResourceMedicationRequest(medicationRequestList.get(0), ResourceUtils.context);
    Quantity rateQuantity = medicationRequest.getDosageInstructionFirstRep().getDoseAndRateFirstRep().getRateQuantity();
    // dosageInstruction.doseAndRate.rateQuantity RXE.23
    // RXO.23
    assertThat(rateQuantity.getValue()).hasToString("7.0");
    // RXO.24.1
    assertThat(rateQuantity.getUnit()).isEqualTo("PC");
    // RXO.24.3
    assertThat(rateQuantity.getSystem()).isEqualTo("http://unitsofmeasure.org");
    // Verify no extraneous resources
    // Expect MedicationRequest, and Patient
    assertThat(e).hasSize(2);
}

Example 17 with Quantity

use of org.hl7.fhir.r4.model.Quantity in project hl7v2-fhir-converter by LinuxForHealth.

the class Hl7MedicationRequestFHIRConversionTest method dosageInstructionTestDoseQuantityRXE.

@Test
void dosageInstructionTestDoseQuantityRXE() {
    // Test dosageInstruction.DoseQuantity RXE.3 using RXE segment, no range
    String hl7message = "MSH|^~\\&||||||S1|RDE^O11||T|2.6|||||||||\n" + "PID|||1234^^^^MR||DOE^JANE^|||F||||||||||||||||||||||\n" + "ORC|NW|||||E|||||||||||||||||||||||I\n" + // RXE.6 through RXE.44 not used.
    "RXE||DUONEB3INH^3 ML PLAS CONT : IPRATROPIUM-ALBUTEROL 0.5-2.5 (3) MG/3ML IN SOLN^ADS|3||mL|||||||||||||||||||||||||||||\n";
    List<BundleEntryComponent> e = ResourceUtils.createFHIRBundleFromHL7MessageReturnEntryList(ftv, hl7message);
    List<Resource> medicationRequestList = ResourceUtils.getResourceList(e, ResourceType.MedicationRequest);
    // Confirm that one medicationRequest was created.
    assertThat(medicationRequestList).hasSize(1);
    MedicationRequest medicationRequest = ResourceUtils.getResourceMedicationRequest(medicationRequestList.get(0), ResourceUtils.context);
    Quantity doseQuantity = medicationRequest.getDosageInstructionFirstRep().getDoseAndRateFirstRep().getDoseQuantity();
    // dosageInstruction.doseAndRate.doseQuantity RXE.3
    // RXE.3
    assertThat(doseQuantity.getValue()).hasToString("3.0");
    // RXE.5.1
    assertThat(doseQuantity.getUnit()).isEqualTo("mL");
    // default
    assertThat(doseQuantity.getSystem()).isEqualTo("http://unitsofmeasure.org");
    // Verify no extraneous resources
    // Expect MedicationRequest, Patient
    assertThat(e).hasSize(2);
}

Example 18 with Quantity

use of org.hl7.fhir.r4.model.Quantity in project hl7v2-fhir-converter by LinuxForHealth.

the class Hl7MedicationRequestFHIRConversionTest method dosageInstructionTestDoseQuantityRXO.

@Test
void dosageInstructionTestDoseQuantityRXO() {
    // Test dosageInstruction.DoseQuantity where RXO.2 exists -> use RXO segment, no range
    String hl7message = "MSH|^~\\\\&|||||20210101000000||OMP^O09|MSGID|T|2.6\n" + "PID|||1234||DOE^JANE^|||F||||||||||||||||||||||\n" + "PV1||||||||||||||||||||||||||||||||||||||||||||\n" + "ORC|OP||||||||||||||||||||||\n" + // RXO.5 through RXO.35 not used.
    "RXO|00054418425^Dexamethasone 4 MG Oral Tablet^NDC|100||CC||||||||||||||||||||||||||\n";
    List<BundleEntryComponent> e = ResourceUtils.createFHIRBundleFromHL7MessageReturnEntryList(ftv, hl7message);
    List<Resource> medicationRequestList = ResourceUtils.getResourceList(e, ResourceType.MedicationRequest);
    // Confirm that one medicationRequest was created.
    assertThat(medicationRequestList).hasSize(1);
    MedicationRequest medicationRequest = ResourceUtils.getResourceMedicationRequest(medicationRequestList.get(0), ResourceUtils.context);
    Quantity doseQuantity = medicationRequest.getDosageInstructionFirstRep().getDoseAndRateFirstRep().getDoseQuantity();
    // dosageInstruction.doseAndRate.doseQuantity RXO.2
    // RXO.2
    assertThat(doseQuantity.getValue()).hasToString("100.0");
    // RXO.4.1
    assertThat(doseQuantity.getUnit()).isEqualTo("CC");
    // default
    assertThat(doseQuantity.getSystem()).isEqualTo("http://unitsofmeasure.org");
    // Verify no extraneous resources
    // Expect MedicationRequest, and Patient
    assertThat(e).hasSize(2);
}

Example 19 with Quantity

use of org.hl7.fhir.r4.model.Quantity in project hl7v2-fhir-converter by LinuxForHealth.

the class Hl7ImmunizationFHIRConversionTest method testImmunizationUsePATOBJ.

@Test
void testImmunizationUsePATOBJ() throws IOException {
    // Test should only return RXA.10, ORC.12  is empty
    // If RXA.20 is RE but RXA.18 is blank then we use PATOBJ from v3ActReason
    String hl7VUXmessageRep = "MSH|^~\\&|EHR|12345^SiteName|MIIS|99990|20140701041038||VXU^V04^VXU_V04|MSG.Valid_01|P|2.6|||\n" + "PID|||1234^^^^MR||DOE^JANE^|||F||||||||||||||||||||||\r" + "ORC|RE||197027||PA|||||^Clerk^Myron|||||||RI2050\r" + "RXA|||20130531||48^HIB PRP-T^CVX|0.5|ML^^UCUM||||||||||||00^refusal|RE\r" + "OBX|1|CWE|30963-3^ VACCINE FUNDING SOURCE^LN|1|V02^VFC eligible Medicaid/MedicaidManaged Care^HL70064\r";
    Immunization immunization = ResourceUtils.getImmunization(ftv, hl7VUXmessageRep);
    assertThat(immunization.hasReasonCode()).isTrue();
    assertThat(immunization.getReasonCodeFirstRep().getCodingFirstRep().getCode()).isEqualTo("00");
    assertThat(immunization.getReasonCodeFirstRep().getCodingFirstRep().getDisplay()).isEqualTo("refusal");
    assertThat(immunization.getReasonCodeFirstRep().getCodingFirstRep().getSystem()).isNull();
    assertThat(immunization.getReasonCodeFirstRep().getText()).isEqualTo("refusal");
    assertThat(immunization.getStatus().getDisplay()).isEqualTo("not-done");
    assertThat(immunization.hasStatusReason()).isTrue();
    // If RXA.20 is RE but RXA.18 is blank then we use PATOBJ from v3ActReason
    assertThat(immunization.getStatusReason().getCodingFirstRep().getCode()).isEqualTo("PATOBJ");
    assertThat(immunization.getStatusReason().getCodingFirstRep().getSystem()).isEqualTo("http://terminology.hl7.org/CodeSystem/v3-ActReason");
    assertThat(immunization.getStatusReason().getCodingFirstRep().getDisplay()).isEqualTo("Patient Refusal");
    // dose Quantity with a known system
    assertThat(immunization.hasDoseQuantity()).isTrue();
    assertThat(immunization.getDoseQuantity().getValue()).hasToString("0.5");
    assertThat(immunization.getDoseQuantity().getUnit()).isEqualTo("ML");
    assertThat(immunization.getDoseQuantity().getSystem()).isEqualTo("http://unitsofmeasure.org");
    // If OBX.3 is 30963-3 the OBX.5 is for funding source
    DatatypeUtils.checkCommonCodeableConceptAssertions(immunization.getFundingSource(), "V02", "VFC eligible Medicaid/MedicaidManaged Care", "https://phinvads.cdc.gov/vads/ViewCodeSystem.action?id=2.16.840.1.113883.12.64#", "VFC eligible Medicaid/MedicaidManaged Care");
    assertThat(immunization.hasProgramEligibility()).isFalse();
    assertThat(immunization.hasReaction()).isFalse();
}

Example 20 with Quantity

use of org.hl7.fhir.r4.model.Quantity in project hl7v2-fhir-converter by LinuxForHealth.

the class Hl7ImmunizationFHIRConversionTest method testImmunizationReturnOnlyRXA10.

@Test
void testImmunizationReturnOnlyRXA10() throws IOException {
    // Test should only return RXA.10, ORC.12  is empty
    // ORC.9 (Backup for RXA.22) has recorded date
    // RXA.18 is not empty which signals that the status is not-done. ORC.5 is here to show precedence
    // Since status is "not-done" we show the Status reason (RXA.18)
    String hl7VUXmessageRep = "MSH|^~\\&|EHR|12345^SiteName|MIIS|99990|20140701041038||VXU^V04^VXU_V04|MSG.Valid_01|P|2.6|||\n" + "PID|||1234^^^^MR||DOE^JANE^|||F||||||||||||||||||||||\r" + "ORC|RE||197027||CP||||20120901041038|^Clerk^Myron|||||||\r" + "RXA|||20130531||48^HIB PRP-T^CVX|0.5|ML^^^|||^Sticker^Nurse||||||||00^Patient refusal^NIP002|||\r" + "OBX|1|CWE|64994-7^vaccine fund pgm elig cat^LN|1|V02^VFC eligible Medicaid/MedicaidManaged Care^HL70064\r";
    Immunization immunization = ResourceUtils.getImmunization(ftv, hl7VUXmessageRep);
    assertThat(immunization.getPerformer()).hasSize(1);
    DatatypeUtils.checkCommonCodingAssertions(immunization.getPerformer().get(0).getFunction().getCodingFirstRep(), "AP", "Administering Provider", "http://terminology.hl7.org/CodeSystem/v2-0443", // RXA.10
    null);
    assertThat(immunization.getPerformer().get(0).getFunction().hasText()).isFalse();
    // RXA.18 is not empty which signals that the status is not-done. ORC.5 is here to show precedence
    assertThat(immunization.getStatus().getDisplay()).isEqualTo("not-done");
    // if status is "not-done" we show the Status reason
    assertThat(immunization.hasStatusReason()).isTrue();
    assertThat(immunization.getStatusReason().getCodingFirstRep().getCode()).isEqualTo("00");
    assertThat(immunization.getStatusReason().getCodingFirstRep().getSystem()).isEqualTo("urn:id:NIP002");
    assertThat(immunization.getStatusReason().getCodingFirstRep().getDisplay()).isEqualTo("Patient refusal");
    // ORC.9
    assertThat(immunization.hasRecorded()).isTrue();
    // ORC.9
    assertThat(immunization.getRecordedElement().toString()).contains("2012-09-01");
    // dose Quantity without a system
    assertThat(immunization.hasDoseQuantity()).isTrue();
    assertThat(immunization.getDoseQuantity().getValue()).hasToString("0.5");
    assertThat(immunization.getDoseQuantity().getUnit()).isEqualTo("ML");
    assertThat(immunization.getDoseQuantity().getSystem()).isNull();
    assertThat(immunization.getDoseQuantity().getCode()).isNull();
    DatatypeUtils.checkCommonCodeableConceptAssertions(immunization.getProgramEligibilityFirstRep(), "V02", "VFC eligible Medicaid/MedicaidManaged Care", "https://phinvads.cdc.gov/vads/ViewCodeSystem.action?id=2.16.840.1.113883.12.64#", "VFC eligible Medicaid/MedicaidManaged Care");
    assertThat(immunization.hasFundingSource()).isFalse();
    assertThat(immunization.hasReaction()).isFalse();
}