Examples with TaskOutputComponent org.hl7.fhir.r4.model.Task.TaskOutputComponent used on opensource projects

Example 1 with TaskOutputComponent

use of org.hl7.fhir.r4.model.Task.TaskOutputComponent in project openmrs-module-fhir2 by openmrs.

the class TaskTranslatorImpl method translateToOutputReference.

private FhirTaskOutput translateToOutputReference(Task.TaskOutputComponent taskOutputComponent) {
    FhirReference outputReference = referenceTranslator.toOpenmrsType((Reference) taskOutputComponent.getValue());
    Concept type = conceptTranslator.toOpenmrsType(taskOutputComponent.getType());
    FhirTaskOutput output = new FhirTaskOutput();
    output.setValueReference(outputReference);
    output.setType(type);
    output.setName("TaskOutputComponent/" + output.getUuid());
    return output;
}

Example 2 with TaskOutputComponent

use of org.hl7.fhir.r4.model.Task.TaskOutputComponent in project Gravity-SDOH-Exchange-RI by FHIR.

the class TaskPollingService method handleFinishedTask.

protected void handleFinishedTask(Bundle resultBundle, Task ehrTask, ServiceRequest ehrServiceRequest, Task cpTask, Endpoint endpoint) {
    if (Task.TaskStatus.COMPLETED.equals(cpTask.getStatus())) {
        ehrServiceRequest.setStatus(ServiceRequest.ServiceRequestStatus.COMPLETED);
        resultBundle.addEntry(FhirUtil.createPutEntry(ehrServiceRequest));
    }
    // property.
    if (Task.TaskStatus.COMPLETED.equals(cpTask.getStatus()) || Task.TaskStatus.CANCELLED.equals(cpTask.getStatus())) {
        // Modify Task.output. If task output is of type resulting-activity and contains a Reference to a proper
        // Procedure - copy output changing a Procedure reference to a local one.
        List<TaskOutputComponent> cpOutputs = cpTask.getOutput().stream().filter(t -> t.getValue() instanceof CodeableConcept || (t.getValue() instanceof Reference && ((Reference) t.getValue()).getReferenceElement().getResourceType().equals(Procedure.class.getSimpleName()))).collect(Collectors.toList());
        if (cpOutputs.size() == 0) {
            log.warn("Not output of type 'http://hl7.org/fhir/us/sdoh-clinicalcare/CodeSystem/sdohcc-temporary-codes|resulting" + "-activity' with a reference to a proper Procedure is present in task with id '{}' at '{}'. " + "Expecting a reference to a Procedure resource.", cpTask.getIdElement().getIdPart(), endpoint.getAddress());
        }
        Map<String, Procedure> cpProcedureMap = getCpProcedures(cpOutputs, endpoint);
        for (Task.TaskOutputComponent cpOutput : cpOutputs) {
            Task.TaskOutputComponent ehrTaskOutput = cpOutput.copy();
            if (cpOutput.getValue() instanceof Reference) {
                Reference cpProcedureReference = (Reference) cpOutput.getValue();
                String cpProcedureId = cpProcedureReference.getReferenceElement().getIdPart();
                Procedure cpProcedure = cpProcedureMap.get(cpProcedureId);
                // All Procedures have the same reason reference as ServiceRequest
                Procedure resultProcedure = copyProcedure(cpProcedure, ehrTask.getFor(), ehrTask.getFocus(), ehrServiceRequest.getReasonReference());
                resultProcedure.setId(IdType.newRandomUuid());
                resultProcedure.addIdentifier().setSystem(endpoint.getAddress()).setValue(cpProcedureId);
                // Add Procedure to result bundle
                resultBundle.addEntry(FhirUtil.createPostEntry(resultProcedure));
                ehrTaskOutput.setValue(FhirUtil.toReference(Procedure.class, resultProcedure.getIdElement().getIdPart(), cpProcedureReference.getDisplay()));
            }
            ehrTask.addOutput(ehrTaskOutput);
        }
    }
}

Example 3 with TaskOutputComponent

use of org.hl7.fhir.r4.model.Task.TaskOutputComponent in project Gravity-SDOH-Exchange-RI by FHIR.

the class OurTaskPollingService method handleFinishedTask.

protected void handleFinishedTask(Bundle resultBundle, Task task, ServiceRequest serviceRequest, Task ourTask) {
    boolean isFinished = false;
    if (TaskStatus.COMPLETED.equals(ourTask.getStatus())) {
        serviceRequest.setStatus(ServiceRequest.ServiceRequestStatus.COMPLETED);
        resultBundle.addEntry(FhirUtil.createPutEntry(serviceRequest));
        isFinished = true;
    } else if (TaskStatus.CANCELLED.equals(ourTask.getStatus()) || TaskStatus.REJECTED.equals(ourTask.getStatus()) || TaskStatus.FAILED.equals(ourTask.getStatus())) {
        serviceRequest.setStatus(ServiceRequest.ServiceRequestStatus.REVOKED);
        resultBundle.addEntry(FhirUtil.createPutEntry(serviceRequest));
        isFinished = true;
    }
    // property.
    if (isFinished) {
        // Modify Task.output. If task output is of type resulting-activity and contains a Reference to a proper
        // Procedure - copy output changing a Procedure reference to a local one.
        List<TaskOutputComponent> ourTaskOutputs = ourTask.getOutput().stream().filter(t -> t.getValue() instanceof CodeableConcept || (t.getValue() instanceof Reference && ((Reference) t.getValue()).getReferenceElement().getResourceType().equals(Procedure.class.getSimpleName()))).collect(Collectors.toList());
        if (ourTaskOutputs.size() == 0) {
            log.warn("No output of type 'http://hl7.org/fhir/us/sdoh-clinicalcare/CodeSystem/sdohcc-temporary-codes|resulting" + "-activity' with a reference to a proper Procedure is present in task with id '{}'. " + "Expecting a reference to a Procedure resource.", ourTask.getIdElement().getIdPart());
        }
        Map<String, Procedure> ourProcedureMap = getOurTaskProcedures(ourTaskOutputs);
        for (TaskOutputComponent ourTaskOutput : ourTaskOutputs) {
            TaskOutputComponent taskOutput = ourTaskOutput.copy();
            if (ourTaskOutput.getValue() instanceof Reference) {
                Reference ourProcedureReference = (Reference) ourTaskOutput.getValue();
                String ourProcedureId = ourProcedureReference.getReferenceElement().getIdPart();
                Procedure ourProcedure = ourProcedureMap.get(ourProcedureId);
                // All Procedures have the same reason reference as ServiceRequest
                Procedure resultProcedure = copyProcedure(ourProcedure, task.getFor(), task.getFocus(), serviceRequest.getReasonReference());
                resultProcedure.setId(IdType.newRandomUuid());
                // TODO add identifier
                // resultProcedure.addIdentifier()
                // .setSystem(SERVER_BASE)
                // .setValue(ourProcedureId);
                // Add Procedure to result bundle
                resultBundle.addEntry(FhirUtil.createPostEntry(resultProcedure));
                taskOutput.setValue(FhirUtil.toReference(Procedure.class, resultProcedure.getIdElement().getIdPart(), ourProcedureReference.getDisplay()));
            }
            task.addOutput(taskOutput);
        }
    }
}

Example 4 with TaskOutputComponent

use of org.hl7.fhir.r4.model.Task.TaskOutputComponent in project Gravity-SDOH-Exchange-RI by FHIR.

the class TaskToDtoConverter method convert.

@Override
public TaskDto convert(Task task) {
    TaskDto taskDto = new TaskDto();
    taskDto.setId(task.getIdElement().getIdPart());
    taskDto.setName(task.getDescription());
    taskDto.setCreatedAt(FhirUtil.toLocalDateTime(task.getAuthoredOnElement()));
    taskDto.setLastModified(FhirUtil.toLocalDateTime(task.getLastModifiedElement()));
    taskDto.setPriority(task.getPriority().getDisplay());
    taskDto.setStatus(task.getStatus().getDisplay());
    taskDto.setComments(task.getNote().stream().map(annotationToDtoConverter::convert).collect(Collectors.toList()));
    taskDto.setStatusReason(task.getStatusReason().getText());
    taskDto.setOrganization(typeToDtoConverter.convert(task.getOwner()));
    for (TaskOutputComponent outputComponent : task.getOutput()) {
        Type componentValue = outputComponent.getValue();
        if (componentValue instanceof Reference) {
            Reference procedureReference = (Reference) componentValue;
            taskDto.getProcedures().add(new ProcedureDto(procedureReference.getReferenceElement().getIdPart(), procedureReference.getDisplay()));
        } else if (componentValue instanceof CodeableConcept) {
            CodeableConcept outcome = (CodeableConcept) componentValue;
            taskDto.setOutcome(outcome.getText());
        }
    }
    return taskDto;
}

Example 5 with TaskOutputComponent

use of org.hl7.fhir.r4.model.Task.TaskOutputComponent in project Gravity-SDOH-Exchange-RI by FHIR.

the class PatientTaskItemInfoHolderToItemDtoConverter method convert.

@Override
public PatientTaskItemDto convert(T taskInfoHolder) {
    Task task = taskInfoHolder.getTask();
    Questionnaire questionnaire = taskInfoHolder.getQuestionnaire();
    PatientTaskItemDto taskDto = createDto();
    taskDto.setId(task.getIdElement().getIdPart());
    taskDto.setName(task.getDescription());
    taskDto.setPriority(task.getPriority().getDisplay());
    taskDto.setLastModified(FhirUtil.toLocalDateTime(task.getLastModifiedElement()));
    taskDto.setStatus(task.getStatus().getDisplay());
    taskDto.setStatusReason(task.getStatusReason().getText());
    setReferralTask(task, taskDto);
    List<Coding> codings = task.getCode().getCoding();
    PatientTaskCode code = getCode(taskDto, codings);
    if (code != null) {
        Coding coding = code.toCoding();
        taskDto.setCode(new CodingDto(coding.getCode(), coding.getDisplay()));
    }
    setTaskType(task, taskDto, code);
    if (questionnaire != null) {
        taskDto.setAssessment(new ReferenceDto(questionnaire.getIdElement().getIdPart(), questionnaire.getTitle()));
    }
    for (TaskOutputComponent outputComponent : task.getOutput()) {
        Type componentValue = outputComponent.getValue();
        Coding coding = FhirUtil.findCoding(Lists.newArrayList(outputComponent.getType()), SDCTemporaryCode.SYSTEM, SDCTemporaryCode.QUESTIONNAIRE_RESPONSE.getCode());
        if (coding != null) {
            Reference qrRef = (Reference) componentValue;
            if (QuestionnaireResponse.class.getSimpleName().equals(qrRef.getReferenceElement().getResourceType())) {
                taskDto.setAssessmentResponse(new ReferenceDto(qrRef.getReferenceElement().getIdPart(), coding.getDisplay()));
            }
        }
        if (componentValue instanceof CodeableConcept) {
            CodeableConcept outcome = (CodeableConcept) componentValue;
            taskDto.setOutcome(outcome.getText());
        }
    }
    return taskDto;
}