use of org.hl7.fhir.r4b.model.PlanDefinition in project org.hl7.fhir.core by hapifhir.
the class BaseWorkerContext method cacheResourceFromPackage.
public void cacheResourceFromPackage(Resource r, PackageVersion packageInfo) throws FHIRException {
synchronized (lock) {
Map<String, ResourceProxy> map = allResourcesById.get(r.fhirType());
if (map == null) {
map = new HashMap<String, ResourceProxy>();
allResourcesById.put(r.fhirType(), map);
}
if ((packageInfo == null || !packageInfo.isExamplesPackage()) || !map.containsKey(r.getId())) {
map.put(r.getId(), new ResourceProxy(r));
} else {
System.out.println("Ignore " + r.fhirType() + "/" + r.getId() + " from package " + packageInfo.toString());
}
if (r instanceof CodeSystem || r instanceof NamingSystem) {
oidCache.clear();
}
if (r instanceof CanonicalResource) {
CanonicalResource m = (CanonicalResource) r;
String url = m.getUrl();
if (!allowLoadingDuplicates && hasResource(r.getClass(), url)) {
// spcial workaround for known problems with existing packages
if (Utilities.existsInList(url, "http://hl7.org/fhir/SearchParameter/example")) {
return;
}
throw new DefinitionException(formatMessage(I18nConstants.DUPLICATE_RESOURCE_, url));
}
if (r instanceof StructureDefinition) {
StructureDefinition sd = (StructureDefinition) m;
if ("1.4.0".equals(version)) {
fixOldSD(sd);
}
structures.see(sd, packageInfo);
} else if (r instanceof ValueSet) {
valueSets.see((ValueSet) m, packageInfo);
} else if (r instanceof CodeSystem) {
CodeSystemUtilities.crossLinkCodeSystem((CodeSystem) r);
codeSystems.see((CodeSystem) m, packageInfo);
} else if (r instanceof ImplementationGuide) {
guides.see((ImplementationGuide) m, packageInfo);
} else if (r instanceof CapabilityStatement) {
capstmts.see((CapabilityStatement) m, packageInfo);
} else if (r instanceof Measure) {
measures.see((Measure) m, packageInfo);
} else if (r instanceof Library) {
libraries.see((Library) m, packageInfo);
} else if (r instanceof SearchParameter) {
searchParameters.see((SearchParameter) m, packageInfo);
} else if (r instanceof PlanDefinition) {
plans.see((PlanDefinition) m, packageInfo);
} else if (r instanceof OperationDefinition) {
operations.see((OperationDefinition) m, packageInfo);
} else if (r instanceof Questionnaire) {
questionnaires.see((Questionnaire) m, packageInfo);
} else if (r instanceof ConceptMap) {
maps.see((ConceptMap) m, packageInfo);
} else if (r instanceof StructureMap) {
transforms.see((StructureMap) m, packageInfo);
} else if (r instanceof NamingSystem) {
systems.see((NamingSystem) m, packageInfo);
}
}
}
}
use of org.hl7.fhir.r4b.model.PlanDefinition in project org.hl7.fhir.core by hapifhir.
the class BaseWorkerContext method registerResourceFromPackage.
public void registerResourceFromPackage(CanonicalResourceProxy r, PackageVersion packageInfo) throws FHIRException {
synchronized (lock) {
Map<String, ResourceProxy> map = allResourcesById.get(r.getType());
if (map == null) {
map = new HashMap<String, ResourceProxy>();
allResourcesById.put(r.getType(), map);
}
if ((packageInfo == null || !packageInfo.isExamplesPackage()) || !map.containsKey(r.getId())) {
map.put(r.getId(), new ResourceProxy(r));
}
String url = r.getUrl();
if (!allowLoadingDuplicates && hasResource(r.getType(), url)) {
// spcial workaround for known problems with existing packages
if (Utilities.existsInList(url, "http://hl7.org/fhir/SearchParameter/example")) {
return;
}
throw new DefinitionException(formatMessage(I18nConstants.DUPLICATE_RESOURCE_, url));
}
switch(r.getType()) {
case "StructureDefinition":
if ("1.4.0".equals(version)) {
StructureDefinition sd = (StructureDefinition) r.getResource();
fixOldSD(sd);
}
structures.register(r, packageInfo);
break;
case "ValueSet":
valueSets.register(r, packageInfo);
break;
case "CodeSystem":
codeSystems.register(r, packageInfo);
break;
case "ImplementationGuide":
guides.register(r, packageInfo);
break;
case "CapabilityStatement":
capstmts.register(r, packageInfo);
break;
case "Measure":
measures.register(r, packageInfo);
break;
case "Library":
libraries.register(r, packageInfo);
break;
case "SearchParameter":
searchParameters.register(r, packageInfo);
break;
case "PlanDefinition":
plans.register(r, packageInfo);
break;
case "OperationDefinition":
operations.register(r, packageInfo);
break;
case "Questionnaire":
questionnaires.register(r, packageInfo);
break;
case "ConceptMap":
maps.register(r, packageInfo);
break;
case "StructureMap":
transforms.register(r, packageInfo);
break;
case "NamingSystem":
systems.register(r, packageInfo);
break;
}
}
}
use of org.hl7.fhir.r4b.model.PlanDefinition in project org.hl7.fhir.core by hapifhir.
the class RdfParser method composePlanDefinitionPlanDefinitionActionParticipantComponent.
protected void composePlanDefinitionPlanDefinitionActionParticipantComponent(Complex parent, String parentType, String name, PlanDefinition.PlanDefinitionActionParticipantComponent element, int index) {
if (element == null)
return;
Complex t;
if (Utilities.noString(parentType))
t = parent;
else {
t = parent.predicate("fhir:" + parentType + '.' + name);
}
composeBackboneElement(t, "participant", name, element, index);
if (element.hasTypeElement())
composeEnum(t, "PlanDefinition", "type", element.getTypeElement(), -1);
if (element.hasRole())
composeCodeableConcept(t, "PlanDefinition", "role", element.getRole(), -1);
}
use of org.hl7.fhir.r4b.model.PlanDefinition in project org.hl7.fhir.core by hapifhir.
the class DataRenderer method isCanonical.
private boolean isCanonical(String path) {
if (!path.endsWith(".url"))
return false;
String t = path.substring(0, path.length() - 4);
StructureDefinition sd = getContext().getWorker().fetchTypeDefinition(t);
if (sd == null)
return false;
if (Utilities.existsInList(t, VersionUtilities.getCanonicalResourceNames(getContext().getWorker().getVersion()))) {
return true;
}
if (Utilities.existsInList(t, "ActivityDefinition", "CapabilityStatement", "CapabilityStatement2", "ChargeItemDefinition", "Citation", "CodeSystem", "CompartmentDefinition", "ConceptMap", "ConditionDefinition", "EventDefinition", "Evidence", "EvidenceReport", "EvidenceVariable", "ExampleScenario", "GraphDefinition", "ImplementationGuide", "Library", "Measure", "MessageDefinition", "NamingSystem", "PlanDefinition"))
return true;
return sd.getBaseDefinitionElement().hasExtension("http://hl7.org/fhir/StructureDefinition/structuredefinition-codegen-super");
}
use of org.hl7.fhir.r4b.model.PlanDefinition in project eCRNow by drajer-health.
the class PlanDefinitionProcessor method processResourceBundle.
public void processResourceBundle() {
// Reading Bundle with Id 506 from ersd server.
// Bundle esrdBundle =
// esrdClient.read().resource(Bundle.class).withId("506").execute();
logger.info(" Reading ERSD Bundle File ");
Bundle ersdBundle = readErsdBundleFromFile();
Bundle actualErsdBundle = null;
if (ersdBundle != null) {
if (ersdBundle.getEntry() != null) {
logger.info(" Bundle has been created with Entries : {}", ersdBundle.getEntry().size());
}
// Check to see if this is a searchset bundle.
if (ersdBundle.getType() == Bundle.BundleType.SEARCHSET) {
// Check if there is a bundle of type collection and use it.
// Typically it will be the first one.
logger.info("Found a Bundle from a search result, containing the actual ERSD Bundle");
List<BundleEntryComponent> innerBundle = ersdBundle.getEntry();
for (BundleEntryComponent bundleEntry : innerBundle) {
if (Optional.ofNullable(bundleEntry).isPresent() && bundleEntry.getResource().getResourceType().equals(ResourceType.Bundle)) {
logger.debug(" Found a bundle within a bundle ");
Bundle ib = (Bundle) (bundleEntry.getResource());
if (ib.getType() == Bundle.BundleType.COLLECTION && ib.getId().contains(ERSD_BUNDLE_ID_STRING)) {
logger.info(" Found the bundle which is the actual ERSD Bundle file ");
actualErsdBundle = ib;
break;
}
}
}
}
List<BundleEntryComponent> bundleEntries = null;
if (actualErsdBundle != null) {
logger.info(" Inner ERSD Bundle Found from where we need to extract the plan definition");
bundleEntries = actualErsdBundle.getEntry();
} else {
logger.info(" Bundle read from configuration is a valid bundle to extract the plan definition");
bundleEntries = ersdBundle.getEntry();
}
ValueSet valueSet = null;
PlanDefinition planDefinition = null;
List<PlanDefinitionActionComponent> actions = null;
List<TriggerDefinition> triggerDefinitionsList = null;
Set<ValueSet> covidValuesets = new HashSet<>();
Set<ValueSet> valuesets = new HashSet<>();
Set<ValueSet> grouperValueSets = new HashSet<>();
Map<EventTypes.EcrActionTypes, Set<AbstractAction>> acts = new HashMap<>();
for (BundleEntryComponent bundleEntry : bundleEntries) {
if (Optional.ofNullable(bundleEntry).isPresent()) {
logger.debug(" Bundle Entries present and is of type {}", bundleEntry.getResource().getResourceType());
if (bundleEntry.getResource().getResourceType().equals(ResourceType.ValueSet)) {
logger.debug(" Found Value set");
valueSet = (ValueSet) bundleEntry.getResource();
if (ApplicationUtils.isACovidValueSet(valueSet)) {
logger.debug(" Found a COVID Value Set {}", valueSet.getId());
valueSetService.createValueSet(valueSet);
covidValuesets.add(valueSet);
valuesets.add(valueSet);
} else if (ApplicationUtils.isAGrouperValueSet(valueSet)) {
logger.debug(" Found a Grouper Value Set {}", valueSet.getId());
valueSetService.createValueSetGrouper(valueSet);
grouperValueSets.add(valueSet);
} else {
logger.debug(" Found a Regular Value Set {}", valueSet.getId());
valueSetService.createValueSet(valueSet);
valuesets.add(valueSet);
}
} else if (bundleEntry.getResource().getResourceType().equals(ResourceType.Library)) {
logger.debug(" Found the Library ");
Library lib = (Library) bundleEntry.getResource();
if (lib.getId().contains("rctc")) {
logger.debug(" Adding Rctc Version to the Action Repo {}", lib.getVersion());
ActionRepo.getInstance().setRctcVersion(lib.getVersion());
}
}
}
}
ValueSetSingleton.getInstance().setCovidValueSets(covidValuesets);
ValueSetSingleton.getInstance().setValueSets(valuesets);
ValueSetSingleton.getInstance().setGrouperValueSets(grouperValueSets);
for (BundleEntryComponent bundleEntry : bundleEntries) {
if (Optional.ofNullable(bundleEntry).isPresent()) {
if (bundleEntry.getResource().getResourceType().equals(ResourceType.PlanDefinition)) {
planDefinition = (PlanDefinition) bundleEntry.getResource();
actions = planDefinition.getAction();
logger.info(" Found Plan Definition ");
if (actions != null && !actions.isEmpty()) {
for (PlanDefinitionActionComponent action : actions) {
if (action.getId().equals("match-trigger")) {
logger.info(" Identified Match Trigger EICR Action ");
MatchTriggerAction mta = new MatchTriggerAction();
populateActionData(mta, acts, action, EcrActionTypes.MATCH_TRIGGER);
triggerDefinitionsList = action.getTrigger();
if (triggerDefinitionsList != null && !triggerDefinitionsList.isEmpty()) {
logger.info(" Number of Trigger Definitions {}", triggerDefinitionsList.size());
for (TriggerDefinition triggerDefinition : triggerDefinitionsList) {
valueSetService.createPlanDefinitionAction(triggerDefinition);
}
}
} else if (action.getId().equals("create-eicr")) {
logger.info(" Identified Create EICR Action ");
CreateEicrAction mta = new CreateEicrAction();
populateActionData(mta, acts, action, EcrActionTypes.CREATE_EICR);
} else if (action.getId().equals("periodic-update-eicr")) {
logger.info(" Identified Periodic Update EICR Action ");
PeriodicUpdateEicrAction mta = new PeriodicUpdateEicrAction();
populateActionData(mta, acts, action, EcrActionTypes.PERIODIC_UPDATE_EICR);
} else if (action.getId().equals("create-eicr-after-recheck")) {
logger.info(" Identified Create EICR After Recheck Action ");
CreateEicrAfterRecheckAction cra = new CreateEicrAfterRecheckAction();
populateActionData(cra, acts, action, EcrActionTypes.CREATE_EICR_AFTER_RECHECK);
} else if (action.getId().equals("close-out-eicr")) {
logger.info(" Identified Close Out EICR Action ");
CloseOutEicrAction mta = new CloseOutEicrAction();
populateActionData(mta, acts, action, EcrActionTypes.CLOSE_OUT_EICR);
} else if (action.getId().equals("validate-eicr")) {
logger.info(" Identified Validate EICR Action ");
ValidateEicrAction mta = new ValidateEicrAction();
populateActionData(mta, acts, action, EcrActionTypes.VALIDATE_EICR);
} else if (action.getId().equals("route-and-send-eicr")) {
logger.info(" Identified Submit EICR Action ");
SubmitEicrAction mta = new SubmitEicrAction();
populateActionData(mta, acts, action, EcrActionTypes.SUBMIT_EICR);
populateRRCheckAction(acts, mta);
}
}
}
}
}
}
if (acts != null) {
ActionRepo.getInstance().setActions(acts);
ActionRepo.getInstance().setupTriggerBasedActions();
}
}
}
Aggregations