use of org.hl7.fhir.r5.model.CodeSystem.ConceptPropertyComponent in project org.hl7.fhir.core by hapifhir.
the class BaseWorkerContext method oid2Uri.
@Override
public String oid2Uri(String oid) {
synchronized (lock) {
if (oid != null && oid.startsWith("urn:oid:")) {
oid = oid.substring(8);
}
if (oidCache.containsKey(oid)) {
return oidCache.get(oid);
}
String uri = OIDUtils.getUriForOid(oid);
if (uri != null) {
oidCache.put(oid, uri);
return uri;
}
CodeSystem cs = fetchCodeSystem("http://terminology.hl7.org/CodeSystem/v2-tables");
if (cs != null) {
for (ConceptDefinitionComponent cc : cs.getConcept()) {
for (ConceptPropertyComponent cp : cc.getProperty()) {
if (Utilities.existsInList(cp.getCode(), "v2-table-oid", "v2-cs-oid") && oid.equals(cp.getValue().primitiveValue())) {
for (ConceptPropertyComponent cp2 : cc.getProperty()) {
if ("v2-cs-uri".equals(cp2.getCode())) {
oidCache.put(oid, cp2.getValue().primitiveValue());
return cp2.getValue().primitiveValue();
}
}
}
}
}
}
for (CodeSystem css : codeSystems.getList()) {
if (("urn:oid:" + oid).equals(css.getUrl())) {
oidCache.put(oid, css.getUrl());
return css.getUrl();
}
for (Identifier id : css.getIdentifier()) {
if ("urn:ietf:rfc:3986".equals(id.getSystem()) && ("urn:oid:" + oid).equals(id.getValue())) {
oidCache.put(oid, css.getUrl());
return css.getUrl();
}
}
}
for (NamingSystem ns : systems.getList()) {
if (hasOid(ns, oid)) {
uri = getUri(ns);
if (uri != null) {
oidCache.put(oid, null);
return null;
}
}
}
}
oidCache.put(oid, null);
return null;
}
use of org.hl7.fhir.r5.model.CodeSystem.ConceptPropertyComponent in project org.hl7.fhir.core by hapifhir.
the class CodeSystemComparer method getProp.
public ConceptPropertyComponent getProp(ConceptDefinitionComponent cd, PropertyComponent p, boolean right, CodeSystemComparison comp) {
String c = p.getCode();
if (right) {
c = comp.getPropMap().get(c);
}
ConceptPropertyComponent cp = null;
if (cd != null) {
for (ConceptPropertyComponent t : cd.getProperty()) {
if (t.hasCode() && t.getCode().equals(c)) {
cp = t;
}
}
}
return cp;
}
use of org.hl7.fhir.r5.model.CodeSystem.ConceptPropertyComponent in project org.hl7.fhir.core by hapifhir.
the class CodeSystemComparer method mergeProps.
private void mergeProps(ConceptDefinitionComponent cd, ConceptDefinitionComponent l, ConceptDefinitionComponent r, List<PropertyComponent> destProps, CodeSystemComparison res) {
List<ConceptPropertyComponent> matchR = new ArrayList<>();
for (ConceptPropertyComponent lp : l.getProperty()) {
ConceptPropertyComponent rp = findRightProp(r.getProperty(), lp, res);
if (rp == null) {
cd.getProperty().add(lp);
} else {
matchR.add(rp);
cd.getProperty().add(lp);
if (lp.getValue().equalsDeep(rp.getValue())) {
cd.getProperty().add(rp.setCode(res.getPropMap().get(rp.getCode())));
}
}
}
for (ConceptPropertyComponent rp : r.getProperty()) {
if (!matchR.contains(rp)) {
cd.getProperty().add(rp.setCode(res.getPropMap().get(rp.getCode())));
}
}
}
use of org.hl7.fhir.r5.model.CodeSystem.ConceptPropertyComponent in project org.hl7.fhir.core by hapifhir.
the class CodeSystemComparer method addRow.
private void addRow(HierarchicalTableGenerator gen, List<Row> rows, StructuralMatch<ConceptDefinitionComponent> t, CodeSystemComparison comparison) {
Row r = gen.new Row();
rows.add(r);
r.getCells().add(gen.new Cell(null, null, t.either().getCode(), null, null));
if (t.hasLeft() && t.hasRight()) {
if (t.getLeft().hasDisplay() && t.getRight().hasDisplay()) {
if (t.getLeft().getDisplay().equals(t.getRight().getDisplay())) {
r.getCells().add(gen.new Cell(null, null, t.getLeft().getDisplay(), null, null).span(2));
} else {
r.getCells().add(gen.new Cell(null, null, t.getLeft().getDisplay(), null, null).setStyle("background-color: " + COLOR_DIFFERENT));
r.getCells().add(gen.new Cell(null, null, t.getRight().getDisplay(), null, null).setStyle("background-color: " + COLOR_DIFFERENT));
}
} else if (t.getLeft().hasDisplay()) {
r.getCells().add(gen.new Cell(null, null, t.getLeft().getDisplay(), null, null));
r.getCells().add(missingCell(gen, COLOR_NO_CELL_RIGHT));
} else if (t.getRight().hasDisplay()) {
r.getCells().add(missingCell(gen, COLOR_NO_CELL_LEFT));
r.getCells().add(gen.new Cell(null, null, t.getRight().getDisplay(), null, null));
} else {
r.getCells().add(missingCell(gen).span(2));
}
for (PropertyComponent p : comparison.getUnion().getProperty()) {
ConceptPropertyComponent lp = getProp(t.getLeft(), p, false, comparison);
ConceptPropertyComponent rp = getProp(t.getRight(), p, true, comparison);
if (lp != null && rp != null) {
if (lp.getValue().equals(rp.getValue())) {
r.getCells().add(gen.new Cell(null, null, t.getLeft().getDisplay(), null, null).span(2));
} else {
r.getCells().add(gen.new Cell(null, null, lp.getValue().toString(), null, null));
r.getCells().add(gen.new Cell(null, null, rp.getValue().toString(), null, null));
}
} else if (lp != null) {
r.getCells().add(gen.new Cell(null, null, lp.getValue().toString(), null, null));
r.getCells().add(missingCell(gen, COLOR_NO_CELL_RIGHT));
} else if (rp != null) {
r.getCells().add(missingCell(gen, COLOR_NO_CELL_LEFT));
r.getCells().add(gen.new Cell(null, null, rp.getValue().toString(), null, null));
} else {
r.getCells().add(missingCell(gen).span(2));
}
}
} else if (t.hasLeft()) {
r.setColor(COLOR_NO_ROW_RIGHT);
r.getCells().add(gen.new Cell(null, null, t.either().getDisplay(), null, null));
r.getCells().add(missingCell(gen));
for (PropertyComponent p : comparison.getUnion().getProperty()) {
r.getCells().add(propertyCell(gen, t.getLeft(), p, false, comparison));
r.getCells().add(missingCell(gen));
}
} else {
r.setColor(COLOR_NO_ROW_LEFT);
r.getCells().add(missingCell(gen));
r.getCells().add(gen.new Cell(null, null, t.either().getDisplay(), null, null));
for (PropertyComponent p : comparison.getUnion().getProperty()) {
r.getCells().add(missingCell(gen));
r.getCells().add(propertyCell(gen, t.getLeft(), p, true, comparison));
}
}
r.getCells().add(cellForMessages(gen, t.getMessages()));
}
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