Examples with DataRequirement org.hl7.fhir.r5.model.DataRequirement used on opensource projects

Example 21 with DataRequirement

use of org.hl7.fhir.r5.model.DataRequirement in project clinical_quality_language by cqframework.

the class DataRequirementsProcessorTest method TestLibraryDataRequirementsRecursive.

@Test
public void TestLibraryDataRequirementsRecursive() {
    CqlTranslatorOptions cqlTranslatorOptions = new CqlTranslatorOptions();
    cqlTranslatorOptions.getFormats().add(CqlTranslator.Format.JSON);
    cqlTranslatorOptions.setCollapseDataRequirements(true);
    try {
        CqlTranslator translator = createTranslator("DataRequirements/DataRequirementsLibraryTest.cql", cqlTranslatorOptions);
        translator.toELM();
        assertTrue(translator.getErrors().isEmpty());
        libraryManager.cacheLibrary(translator.getTranslatedLibrary());
        DataRequirementsProcessor dqReqTrans = new DataRequirementsProcessor();
        org.hl7.fhir.r5.model.Library moduleDefinitionLibrary = dqReqTrans.gatherDataRequirements(libraryManager, translator.getTranslatedLibrary(), cqlTranslatorOptions, null, false);
        assertTrue(moduleDefinitionLibrary.getType().getCode("http://terminology.hl7.org/CodeSystem/library-type").equalsIgnoreCase("module-definition"));
        DataRequirement encounterRequirement = null;
        for (DataRequirement dr : moduleDefinitionLibrary.getDataRequirement()) {
            if (dr.getType() == Enumerations.FHIRAllTypes.ENCOUNTER) {
                encounterRequirement = dr;
                break;
            }
        }
        assertTrue(encounterRequirement != null);
        FhirContext context = getFhirContext();
        IParser parser = context.newJsonParser();
        String moduleDefString = parser.setPrettyPrint(true).encodeResourceToString(moduleDefinitionLibrary);
        logger.debug(moduleDefString);
    } catch (IOException ioException) {
        ioException.printStackTrace();
    }
}

Example 22 with DataRequirement

use of org.hl7.fhir.r5.model.DataRequirement in project cqf-ruler by DBCG.

the class DataOperationProviderIT method testR4LibraryEvaluationTest.

@Test
public void testR4LibraryEvaluationTest() throws IOException {
    String bundleAsText = stringFromResource("bundlegen-bundle.json");
    Bundle bundle = (Bundle) getFhirContext().newJsonParser().parseResource(bundleAsText);
    getClient().transaction().withBundle(bundle).execute();
    Parameters params = new Parameters();
    params.addParameter().setName("target").setValue(new StringType("dummy"));
    Library returnLibrary = getClient().operation().onInstance(new IdType("Library", "LibraryEvaluationTest")).named("$data-requirements").withParameters(params).returnResourceType(Library.class).execute();
    assertNotNull(returnLibrary);
    System.out.println("Resource:" + this.getFhirContext().newJsonParser().setPrettyPrint(true).encodeResourceToString(returnLibrary));
    for (DataRequirement dr : returnLibrary.getDataRequirement()) {
        String query = dr.getExtensionByUrl("http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/cqfm-fhirQueryPattern").getValueAsPrimitive().getValueAsString();
        switch(dr.getType()) {
            case "Patient":
                {
                    assertTrue("Patient?_id={{context.patientId}}".equals(query));
                }
                break;
            case "Condition":
                {
                    if (dr.hasCodeFilter() && dr.getCodeFilter().size() > 0) {
                        assertTrue("Condition?category:in=http://mcg.com/fhir/ValueSet/condition-problem-list-category&subject=Patient/{{context.patientId}}".equals(query));
                    } else {
                        assertTrue("Condition?subject=Patient/{{context.patientId}}".equals(query));
                    }
                }
                break;
            case "Encounter":
                {
                    assertTrue("Encounter?subject=Patient/{{context.patientId}}".equals(query));
                }
                break;
            case "Procedure":
                {
                    assertTrue("Procedure?subject=Patient/{{context.patientId}}".equals(query));
                }
                break;
        }
    }
}

Example 23 with DataRequirement

use of org.hl7.fhir.r5.model.DataRequirement in project cqf-ruler by DBCG.

the class DataOperationProviderIT method testR4LibraryFhirQueryPattern.

@Test
public void testR4LibraryFhirQueryPattern() throws IOException {
    String bundleAsText = stringFromResource("ExmLogicTransactionBundle.json");
    Bundle bundle = (Bundle) getFhirContext().newJsonParser().parseResource(bundleAsText);
    getClient().transaction().withBundle(bundle).execute();
    Parameters params = new Parameters();
    params.addParameter().setName("target").setValue(new StringType("dummy"));
    Library returnLibrary = getClient().operation().onInstance(new IdType("Library", "EXMLogic")).named("$data-requirements").withParameters(params).returnResourceType(Library.class).execute();
    assertNotNull(returnLibrary);
    for (DataRequirement dr : returnLibrary.getDataRequirement()) {
        switch(dr.getType()) {
            case "Patient":
                {
                    String query = dr.getExtensionByUrl("http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/cqfm-fhirQueryPattern").getValueAsPrimitive().getValueAsString();
                    assertTrue("Patient?_id={{context.patientId}}".equals(query));
                }
                break;
            case "Encounter":
                {
                    String query = dr.getExtensionByUrl("http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/cqfm-fhirQueryPattern").getValueAsPrimitive().getValueAsString();
                    if (dr.hasCodeFilter()) {
                        assertTrue("Encounter?status=finished&subject=Patient/{{context.patientId}}&type:in=http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292".equals(query));
                    } else {
                        assertTrue("Encounter?subject=Patient/{{context.patientId}}".equals(query));
                    }
                }
                break;
            case "Coverage":
                {
                    String query = dr.getExtensionByUrl("http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/cqfm-fhirQueryPattern").getValueAsPrimitive().getValueAsString();
                    assertTrue("Coverage?policy-holder=Patient/{{context.patientId}}&type:in=http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.3591".equals(query));
                }
                break;
        }
    }
}

Example 24 with DataRequirement

use of org.hl7.fhir.r5.model.DataRequirement in project cqf-ruler by DBCG.

the class DataOperationProviderIT method testR4MeasureFhirQueryPattern.

@Test
public void testR4MeasureFhirQueryPattern() throws IOException {
    String bundleAsText = stringFromResource("ExmLogicMeasureTransactionBundle.json");
    Bundle bundle = (Bundle) getFhirContext().newJsonParser().parseResource(bundleAsText);
    getClient().transaction().withBundle(bundle).execute();
    Parameters params = new Parameters();
    params.addParameter().setName("startPeriod").setValue(new StringType("2019-01-01"));
    params.addParameter().setName("endPeriod").setValue(new StringType("2020-01-01"));
    Library returnLibrary = getClient().operation().onInstance(new IdType("Measure", "measure-exm")).named("$data-requirements").withParameters(params).returnResourceType(Library.class).execute();
    assertNotNull(returnLibrary);
    for (DataRequirement dr : returnLibrary.getDataRequirement()) {
        switch(dr.getType()) {
            case "Patient":
                {
                    String query = dr.getExtensionByUrl("http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/cqfm-fhirQueryPattern").getValueAsPrimitive().getValueAsString();
                    assertTrue("Patient?_id={{context.patientId}}".equals(query));
                }
                break;
            case "Encounter":
                {
                    String query = dr.getExtensionByUrl("http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/cqfm-fhirQueryPattern").getValueAsPrimitive().getValueAsString();
                    if (dr.hasCodeFilter()) {
                        assertTrue("Encounter?status=finished&subject=Patient/{{context.patientId}}&type:in=http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292".equals(query));
                    } else {
                        assertTrue("Encounter?subject=Patient/{{context.patientId}}".equals(query));
                    }
                }
                break;
            case "Coverage":
                {
                    String query = dr.getExtensionByUrl("http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/cqfm-fhirQueryPattern").getValueAsPrimitive().getValueAsString();
                    assertTrue("Coverage?policy-holder=Patient/{{context.patientId}}&type:in=http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.3591".equals(query));
                }
                break;
        }
    }
}

Example 25 with DataRequirement

use of org.hl7.fhir.r5.model.DataRequirement in project cqf-ruler by DBCG.

the class DiscoveryResolutionR4 method getPrefetchUrlList.

public PrefetchUrlList getPrefetchUrlList(PlanDefinition planDefinition) {
    PrefetchUrlList prefetchList = new PrefetchUrlList();
    if (planDefinition == null)
        return null;
    if (!isEca(planDefinition))
        return null;
    Library library = resolvePrimaryLibrary(planDefinition);
    // TODO: resolve data requirements
    if (library == null || !library.hasDataRequirement())
        return null;
    for (DataRequirement dataRequirement : library.getDataRequirement()) {
        List<String> requestUrls = createRequestUrl(dataRequirement);
        if (requestUrls != null) {
            prefetchList.addAll(requestUrls);
        }
    }
    return prefetchList;
}