Examples with Expression org.hl7.fhir.r5.model.Expression used on opensource projects

Example 16 with Expression

use of org.hl7.fhir.r5.model.Expression in project cqf-ruler by DBCG.

the class CqlExecutionProviderIT method testDataBundleCqlExecutionProviderWithSubject.

@Test
public void testDataBundleCqlExecutionProviderWithSubject() throws Exception {
    Parameters params = new Parameters();
    Parameters libraryParameter = new Parameters();
    params.addParameter().setName("subject").setValue(new StringType("Patient/SimplePatient"));
    libraryParameter.addParameter().setName("url").setValue(new StringType(this.getClient().getServerBase() + "Library/SimpleDstu3Library"));
    libraryParameter.addParameter().setName("name").setValue(new StringType("SimpleDstu3Library"));
    params.addParameter().setName("library").setResource(libraryParameter);
    params.addParameter().setName("expression").setValue(new StringType("SimpleDstu3Library.\"observationRetrieve\""));
    String packagePrefix = "org/opencds/cqf/ruler/cpg/dstu3/provider/";
    loadResource(packagePrefix + "SimpleDstu3Library.json");
    loadResource(packagePrefix + "SimplePatient.json");
    Bundle data = (Bundle) loadResource(packagePrefix + "SimpleDataBundle.json");
    params.addParameter().setName("data").setResource(data);
    params.addParameter().setName("useServerData").setValue(new BooleanType(false));
    Parameters results = getClient().operation().onServer().named("$cql").withParameters(params).execute();
    assertTrue(results.getParameter().get(0).getResource() instanceof Bundle);
    assertTrue(((Bundle) results.getParameter().get(0).getResource()).getEntry().get(0).getResource() instanceof Observation);
    assertTrue(results.getParameter().get(1).getValue() instanceof StringType);
    assertTrue(((StringType) results.getParameter().get(1).getValue()).asStringValue().equals("List"));
    logger.debug("Results: ", results);
}

Example 17 with Expression

use of org.hl7.fhir.r5.model.Expression in project cqf-ruler by DBCG.

the class CqlExecutionProviderIT method testDataBundleCqlExecutionProvider.

@Test
public void testDataBundleCqlExecutionProvider() throws Exception {
    Parameters params = new Parameters();
    Parameters libraryParameter = new Parameters();
    libraryParameter.addParameter().setName("url").setValue(new StringType(this.getClient().getServerBase() + "Library/SimpleDstu3Library"));
    libraryParameter.addParameter().setName("name").setValue(new StringType("SimpleDstu3Library"));
    params.addParameter().setName("library").setResource(libraryParameter);
    params.addParameter().setName("expression").setValue(new StringType("SimpleDstu3Library.\"observationRetrieve\""));
    String packagePrefix = "org/opencds/cqf/ruler/cpg/dstu3/provider/";
    loadResource(packagePrefix + "SimpleDstu3Library.json");
    loadResource(packagePrefix + "SimplePatient.json");
    Bundle data = (Bundle) loadResource(packagePrefix + "SimpleDataBundle.json");
    params.addParameter().setName("data").setResource(data);
    params.addParameter().setName("useServerData").setValue(new BooleanType(false));
    Parameters results = getClient().operation().onServer().named("$cql").withParameters(params).execute();
    assertTrue(results.getParameter().get(0).getResource() instanceof Bundle);
    assertTrue(((Bundle) results.getParameter().get(0).getResource()).getEntry().get(0).getResource() instanceof Observation);
    assertTrue(results.getParameter().get(1).getValue() instanceof StringType);
    assertTrue(((StringType) results.getParameter().get(1).getValue()).asStringValue().equals("List"));
    logger.debug("Results: ", results);
}

Example 18 with Expression

use of org.hl7.fhir.r5.model.Expression in project cqf-ruler by DBCG.

the class CqlExecutionProviderIT method testReferencedLibraryCqlExecutionProvider.

@Test
public void testReferencedLibraryCqlExecutionProvider() throws Exception {
    Parameters params = new Parameters();
    params.addParameter().setName("subject").setValue(new StringType("Patient/SimplePatient"));
    Parameters libraryParameter = new Parameters();
    libraryParameter.addParameter().setName("url").setValue(new StringType(this.getClient().getServerBase() + "Library/SimpleDstu3Library"));
    libraryParameter.addParameter().setName("name").setValue(new StringType("SimpleDstu3Library"));
    params.addParameter().setName("library").setResource(libraryParameter);
    params.addParameter().setName("expression").setValue(new StringType("SimpleDstu3Library.\"simpleBooleanExpression\""));
    String packagePrefix = "org/opencds/cqf/ruler/cpg/dstu3/provider/";
    loadResource(packagePrefix + "SimpleDstu3Library.json");
    loadResource(packagePrefix + "SimplePatient.json");
    Parameters results = getClient().operation().onServer().named("$cql").withParameters(params).execute();
    assertTrue(results.getParameter().get(0).getValue() instanceof StringType);
    assertTrue(((StringType) results.getParameter().get(0).getValue()).asStringValue().equals("true"));
    assertTrue(results.getParameter().get(1).getValue() instanceof StringType);
    assertTrue(((StringType) results.getParameter().get(1).getValue()).asStringValue().equals("Boolean"));
    logger.debug("Results: ", results);
}

Example 19 with Expression

use of org.hl7.fhir.r5.model.Expression in project quality-measure-and-cohort-service by Alvearie.

the class CohortCLITest method testMainNonPatientContext.

@Test
public void testMainNonPatientContext() throws Exception {
    Encounter encounter = new Encounter();
    encounter.setId("123");
    encounter.setStatus(Encounter.EncounterStatus.FINISHED);
    Encounter otherEncounter = new Encounter();
    otherEncounter.setId("234");
    otherEncounter.setStatus(Encounter.EncounterStatus.FINISHED);
    FhirServerConfig fhirConfig = getFhirServerConfig();
    String resourcePath = "/Encounter?_count=1000&_format=json";
    mockFhirResourceRetrieval(resourcePath, getFhirParser(), makeBundle(encounter, otherEncounter));
    setupTestFor(encounter, fhirConfig, "cql.encounter-context");
    File tmpFile = new File("target/fhir-stub.json");
    ObjectMapper om = new ObjectMapper();
    try (Writer w = new FileWriter(tmpFile)) {
        w.write(om.writeValueAsString(fhirConfig));
    }
    try {
        PrintStream originalOut = System.out;
        ByteArrayOutputStream baos = new ByteArrayOutputStream();
        try (PrintStream captureOut = new PrintStream(baos)) {
            System.setOut(captureOut);
            CohortCLI.main(new String[] { "-d", tmpFile.getAbsolutePath(), "-t", tmpFile.getAbsolutePath(), "-f", "src/test/resources/cql/encounter-context", "-l", "EncounterContext", "-v", "1.0.0", "-e", "ValidEncounterCount", "-n", "Encounter" });
        } finally {
            System.setOut(originalOut);
        }
        String output = baos.toString();
        assertTrue(output.contains("Expression: \"ValidEncounterCount\", Result: 2"));
        verify(1, getRequestedFor(urlEqualTo(resourcePath)));
    } finally {
        tmpFile.delete();
    }
}

Example 20 with Expression

use of org.hl7.fhir.r5.model.Expression in project quality-measure-and-cohort-service by Alvearie.

the class FhirTestBase method createSupplementalDataComponent.

protected MeasureSupplementalDataComponent createSupplementalDataComponent(String defineName, String text) {
    MeasureSupplementalDataComponent supplementalDataComponent = new MeasureSupplementalDataComponent();
    CodeableConcept supplementalCC = new CodeableConcept();
    Coding supplementalCoding = new Coding();
    supplementalCoding.setCode("supplemental-data-coding");
    supplementalCC.setCoding(Arrays.asList(supplementalCoding));
    supplementalCC.setText(text);
    supplementalDataComponent.setCode(supplementalCC);
    CodeableConcept usage = new CodeableConcept();
    Coding usageCoding = new Coding();
    usageCoding.setCode("supplemental-data");
    usage.setCoding(Arrays.asList(usageCoding));
    supplementalDataComponent.setUsage(Arrays.asList(usage));
    Expression supplementalExpression = new Expression();
    supplementalExpression.setExpression(defineName);
    supplementalExpression.setLanguage("text/cql.identifier");
    supplementalDataComponent.setCriteria(supplementalExpression);
    return supplementalDataComponent;
}