Examples with PatientTaskInfoHolder org.hl7.gravity.refimpl.sdohexchange.fhir.extract.patienttask.PatientTaskInfoBundleExtractor.PatientTaskInfoHolder used on opensource projects

Example 1 with PatientTaskInfoHolder

use of org.hl7.gravity.refimpl.sdohexchange.fhir.extract.patienttask.PatientTaskInfoBundleExtractor.PatientTaskInfoHolder in project Gravity-SDOH-Exchange-RI by FHIR.

the class PatientTaskInfoHolderToDtoConverter method convert.

@Override
public PatientTaskDto convert(PatientTaskInfoHolder taskInfoHolder) {
    Task task = taskInfoHolder.getTask();
    PatientTaskDto taskDto = (PatientTaskDto) super.convert(taskInfoHolder);
    taskDto.setCreatedAt(FhirUtil.toLocalDateTime(task.getAuthoredOnElement()));
    taskDto.setComments(task.getNote().stream().map(annotationToDtoConverter::convert).collect(Collectors.toList()));
    taskDto.setOccurrence(new OccurrenceResponseDto(FhirUtil.toLocalDateTime(task.getExecutionPeriod().getStartElement()), FhirUtil.toLocalDateTime(task.getExecutionPeriod().getEndElement())));
    if (taskInfoHolder.getQuestionnaireResponse() != null) {
        taskDto.setAnswers(taskInfoHolder.getQuestionnaireResponse().getItem().stream().collect(Collectors.toMap(qr -> qr.getText(), qr -> {
            Type itemAnswer = qr.getAnswerFirstRep().getValue();
            if (itemAnswer instanceof StringType) {
                return ((StringType) itemAnswer).getValue();
            } else if (itemAnswer instanceof Coding) {
                return ((Coding) itemAnswer).getDisplay();
            } else {
                taskDto.getErrors().add(String.format("Answer cannot be resolved. %s type is not expected.", itemAnswer.getClass().getSimpleName()));
                return "Answer cannot be parsed.";
            }
        }, (existing, replacement) -> {
            taskDto.getErrors().add(String.format("Duplicating questions detected. Value '%s' overwrites the value '%s'", replacement, existing));
            return replacement;
        }, LinkedHashMap::new)));
    }
    return taskDto;
}

Example 2 with PatientTaskInfoHolder

use of org.hl7.gravity.refimpl.sdohexchange.fhir.extract.patienttask.PatientTaskInfoBundleExtractor.PatientTaskInfoHolder in project Gravity-SDOH-Exchange-RI by FHIR.

the class PatientTaskInfoBundleExtractor method extract.

@Override
public List<PatientTaskInfoHolder> extract(Bundle bundle) {
    List<PatientTaskItemInfoHolder> patientTaskItemInfoHolders = patientTaskItemInfoBundleExtractor.extract(bundle);
    Map<String, QuestionnaireResponse> questionnaireResponsesMap = FhirUtil.getFromBundle(bundle, QuestionnaireResponse.class).stream().collect(Collectors.toMap(qr -> qr.getIdElement().getIdPart(), Function.identity()));
    return patientTaskItemInfoHolders.stream().map(infoHolder -> {
        Task.TaskOutputComponent outputComponent = infoHolder.getTask().getOutput().stream().filter(o -> FhirUtil.findCoding(Lists.newArrayList(o.getType()), SDCTemporaryCode.SYSTEM, SDCTemporaryCode.QUESTIONNAIRE_RESPONSE.getCode()) != null).findAny().orElse(null);
        String questionnaireResponseId = null;
        if (outputComponent != null) {
            questionnaireResponseId = ((Reference) outputComponent.getValue()).getReferenceElement().getIdPart();
        }
        return new PatientTaskInfoHolder(infoHolder, questionnaireResponsesMap.get(questionnaireResponseId));
    }).collect(Collectors.toList());
}