Example 11 with org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index
use of org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index in project jaxdb by jaxdb.
the class Generator method getType.
private Type getType(final Table table, final $Column column) throws GeneratorExecutionException {
final String columnName = column.getName$().text();
boolean isKeyForUpdate = false;
// FIXME: Make efficient
if (table.getJsqlKeyForUpdate() != null)
for (final xLygluGCXAA.$Named col : table.getJsqlKeyForUpdate().getColumn()) if (isKeyForUpdate = columnName.equals(col.getName$().text()))
break;
final Class<?> cls = column.getClass().getSuperclass();
GenerateOn<?> generateOnInsert = null;
GenerateOn<?> generateOnUpdate = null;
final boolean isPrimary = ddlx.isPrimary(table, column);
final Object[] commonParams = { THIS, MUTABLE, "\"" + column.getName$().text() + "\"", ddlx.isUnique(table, column), isPrimary, isNull(column) };
if (column instanceof $Char) {
final $Char type = ($Char) column;
if (type.getSqlxGenerateOnInsert$() != null) {
if ($Char.GenerateOnInsert$.UUID.text().equals(type.getSqlxGenerateOnInsert$().text()))
generateOnInsert = GenerateOn.UUID;
else
throw new GeneratorExecutionException("Unknown generateOnInsert specification: " + type.getSqlxGenerateOnInsert$().text());
}
return new Type(table, column, isPrimary, data.CHAR.class, commonParams, type.getDefault$() == null ? null : type.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, type.getLength$() == null ? null : type.getLength$().text(), isVarying(type.getVarying$()));
}
if (column instanceof $Clob) {
final $Clob type = ($Clob) column;
return new Type(table, column, isPrimary, data.CLOB.class, commonParams, null, generateOnInsert, generateOnUpdate, isKeyForUpdate, type.getLength$() == null ? null : type.getLength$().text());
}
if (column instanceof $Binary) {
final $Binary type = ($Binary) column;
return new Type(table, column, isPrimary, data.BINARY.class, commonParams, type.getDefault$() == null ? null : type.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, type.getLength$() == null ? null : type.getLength$().text(), isVarying(type.getVarying$()));
}
if (column instanceof $Blob) {
final $Blob type = ($Blob) column;
return new Type(table, column, isPrimary, data.BLOB.class, commonParams, null, generateOnInsert, generateOnUpdate, isKeyForUpdate, type.getLength$() == null ? null : type.getLength$().text());
}
if (column instanceof $Integer) {
final $Integer integerColumn = ($Integer) column;
if (integerColumn.getGenerateOnInsert$() != null) {
if ($Integer.GenerateOnInsert$.AUTO_5FINCREMENT.text().equals(integerColumn.getGenerateOnInsert$().text())) {
generateOnInsert = GenerateOn.AUTO_GENERATED;
} else {
throw new GeneratorExecutionException("Unknown generateOnInsert specification: " + integerColumn.getGenerateOnInsert$().text());
}
}
if (column instanceof $Tinyint) {
final $Tinyint integer = ($Tinyint) column;
if (integer.getSqlxGenerateOnUpdate$() != null) {
if ($Tinyint.GenerateOnUpdate$.INCREMENT.text().equals(integer.getSqlxGenerateOnUpdate$().text())) {
if (isPrimary)
throw new GeneratorExecutionException("Primary column \"" + table.getName$().text() + "." + column.getName$().text() + "\" cannot specify generateOnUpdate");
generateOnUpdate = GenerateOn.INCREMENT;
} else {
throw new GeneratorExecutionException("Unknown generateOnUpdate specification: " + integer.getSqlxGenerateOnUpdate$().text());
}
}
return new Type(table, column, isPrimary, data.TINYINT.class, commonParams, integer.getDefault$() == null ? null : integer.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, integer.getPrecision$() == null ? null : integer.getPrecision$().text().intValue(), integer.getMin$() == null ? null : integer.getMin$().text(), integer.getMax$() == null ? null : integer.getMax$().text());
}
if (column instanceof $Smallint) {
final $Smallint integer = ($Smallint) column;
if (integer.getSqlxGenerateOnUpdate$() != null) {
if ($Smallint.GenerateOnUpdate$.INCREMENT.text().equals(integer.getSqlxGenerateOnUpdate$().text())) {
if (isPrimary)
throw new GeneratorExecutionException("Primary column \"" + table.getName$().text() + "." + column.getName$().text() + "\" cannot specify generateOnUpdate");
generateOnUpdate = GenerateOn.INCREMENT;
} else {
throw new GeneratorExecutionException("Unknown generateOnUpdate specification: " + integer.getSqlxGenerateOnUpdate$().text());
}
}
return new Type(table, column, isPrimary, data.SMALLINT.class, commonParams, integer.getDefault$() == null ? null : integer.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, integer.getPrecision$() == null ? null : integer.getPrecision$().text().intValue(), integer.getMin$() == null ? null : integer.getMin$().text(), integer.getMax$() == null ? null : integer.getMax$().text());
}
if (column instanceof $Int) {
final $Int integer = ($Int) column;
if (integer.getSqlxGenerateOnInsert$() != null) {
if (generateOnInsert != null)
throw new GeneratorExecutionException("ddlx:generateOnInsert and sqlx:generateOnInsert are mutually exclusive");
if ($Int.GenerateOnInsert$.EPOCH_5FMINUTES.text().equals(integer.getSqlxGenerateOnInsert$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 8)
throw new GeneratorExecutionException("INT(" + integer.getPrecision$().text() + ") requires minimum precision of 8 for EPOCH_MINUTES");
generateOnInsert = GenerateOn.EPOCH_MINUTES;
} else if ($Int.GenerateOnInsert$.EPOCH_5FSECONDS.text().equals(integer.getSqlxGenerateOnInsert$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 10)
throw new GeneratorExecutionException("INT(" + integer.getPrecision$().text() + ") requires minimum precision of 10 for EPOCH_SECONDS");
generateOnInsert = GenerateOn.EPOCH_SECONDS;
} else {
throw new GeneratorExecutionException("Unknown generateOnInsert specification: " + integer.getSqlxGenerateOnInsert$().text());
}
}
if (integer.getSqlxGenerateOnUpdate$() != null) {
if (isPrimary)
throw new GeneratorExecutionException("Primary column \"" + table.getName$().text() + "." + column.getName$().text() + "\" cannot specify generateOnUpdate");
if ($Int.GenerateOnUpdate$.INCREMENT.text().equals(integer.getSqlxGenerateOnUpdate$().text())) {
generateOnUpdate = GenerateOn.INCREMENT;
} else if ($Int.GenerateOnUpdate$.EPOCH_5FMINUTES.text().equals(integer.getSqlxGenerateOnUpdate$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 8)
throw new GeneratorExecutionException("INT(" + integer.getPrecision$().text() + ") requires minimum precision of 8 for EPOCH_MINUTES");
generateOnUpdate = GenerateOn.EPOCH_MINUTES;
} else if ($Int.GenerateOnUpdate$.EPOCH_5FSECONDS.text().equals(integer.getSqlxGenerateOnUpdate$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 10)
throw new GeneratorExecutionException("INT(" + integer.getPrecision$().text() + ") requires minimum precision of 10 for EPOCH_SECONDS");
generateOnUpdate = GenerateOn.EPOCH_SECONDS;
} else {
throw new GeneratorExecutionException("Unknown generateOnUpdate specification: " + integer.getSqlxGenerateOnUpdate$().text());
}
}
return new Type(table, column, isPrimary, data.INT.class, commonParams, integer.getDefault$() == null ? null : integer.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, integer.getPrecision$() == null ? null : integer.getPrecision$().text().intValue(), integer.getMin$() == null ? null : integer.getMin$().text(), integer.getMax$() == null ? null : integer.getMax$().text());
}
if (column instanceof $Bigint) {
final $Bigint integer = ($Bigint) column;
if (integer.getSqlxGenerateOnInsert$() != null) {
if (generateOnInsert != null)
throw new GeneratorExecutionException("ddlx:generateOnInsert and sqlx:generateOnInsert are mutually exclusive");
if ($Bigint.GenerateOnInsert$.EPOCH_5FMINUTES.text().equals(integer.getSqlxGenerateOnInsert$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 8)
throw new GeneratorExecutionException("BIGINT(" + integer.getPrecision$().text() + ") requires minimum precision of 8 for EPOCH_MINUTES");
generateOnInsert = GenerateOn.EPOCH_MINUTES;
} else if ($Bigint.GenerateOnInsert$.EPOCH_5FSECONDS.text().equals(integer.getSqlxGenerateOnInsert$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 10)
throw new GeneratorExecutionException("BIGINT(" + integer.getPrecision$().text() + ") requires minimum precision of 10 for EPOCH_SECONDS");
generateOnInsert = GenerateOn.EPOCH_SECONDS;
} else if ($Bigint.GenerateOnInsert$.EPOCH_5FMILLIS.text().equals(integer.getSqlxGenerateOnInsert$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 13)
throw new GeneratorExecutionException("BIGINT(" + integer.getPrecision$().text() + ") requires minimum precision of 13 for EPOCH_MILLIS");
generateOnInsert = GenerateOn.EPOCH_MILLIS;
} else {
throw new GeneratorExecutionException("Unknown generateOnInsert specification: " + integer.getSqlxGenerateOnInsert$().text());
}
}
if (integer.getSqlxGenerateOnUpdate$() != null) {
if (isPrimary)
throw new GeneratorExecutionException("Primary column \"" + table.getName$().text() + "." + column.getName$().text() + "\" cannot specify generateOnUpdate");
if ($Bigint.GenerateOnUpdate$.INCREMENT.text().equals(integer.getSqlxGenerateOnUpdate$().text())) {
generateOnUpdate = GenerateOn.INCREMENT;
} else if ($Bigint.GenerateOnUpdate$.EPOCH_5FMINUTES.text().equals(integer.getSqlxGenerateOnUpdate$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 8)
throw new GeneratorExecutionException("BIGINT(" + integer.getPrecision$().text() + ") requires minimum precision of 8 for EPOCH_MINUTES");
generateOnUpdate = GenerateOn.EPOCH_MINUTES;
} else if ($Bigint.GenerateOnUpdate$.EPOCH_5FSECONDS.text().equals(integer.getSqlxGenerateOnUpdate$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 10)
throw new GeneratorExecutionException("BIGINT(" + integer.getPrecision$().text() + ") requires minimum precision of 10 for EPOCH_SECONDS");
generateOnUpdate = GenerateOn.EPOCH_SECONDS;
} else if ($Bigint.GenerateOnUpdate$.EPOCH_5FMILLIS.text().equals(integer.getSqlxGenerateOnUpdate$().text())) {
if (integer.getPrecision$().text() != null && integer.getPrecision$().text() < 13)
throw new GeneratorExecutionException("BIGINT(" + integer.getPrecision$().text() + ") requires minimum precision of 13 for EPOCH_MILLIS");
generateOnUpdate = GenerateOn.EPOCH_MILLIS;
} else {
throw new GeneratorExecutionException("Unknown generateOnUpdate specification: " + integer.getSqlxGenerateOnUpdate$().text());
}
}
return new Type(table, column, isPrimary, data.BIGINT.class, commonParams, integer.getDefault$() == null ? null : integer.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, integer.getPrecision$() == null ? null : integer.getPrecision$().text().intValue(), integer.getMin$() == null ? null : integer.getMin$().text(), integer.getMax$() == null ? null : integer.getMax$().text());
}
}
if (column instanceof $Float) {
final $Float type = ($Float) column;
final Class<? extends data.Column<?>> col = data.FLOAT.class;
final Number min = type.getMin$() != null ? type.getMin$().text() : null;
final Number max = type.getMax$() != null ? type.getMax$().text() : null;
return new Type(table, column, isPrimary, col, commonParams, type.getDefault$() == null ? null : type.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, min, max);
}
if (column instanceof $Double) {
final $Double type = ($Double) column;
final Class<? extends data.Column<?>> col = data.DOUBLE.class;
final Number min = type.getMin$() != null ? type.getMin$().text() : null;
final Number max = type.getMax$() != null ? type.getMax$().text() : null;
return new Type(table, column, isPrimary, col, commonParams, type.getDefault$() == null ? null : type.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, min, max);
}
if (column instanceof $Decimal) {
final $Decimal type = ($Decimal) column;
return new Type(table, column, isPrimary, data.DECIMAL.class, commonParams, type.getDefault$() == null ? null : type.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, type.getPrecision$() == null ? null : type.getPrecision$().text().intValue(), type.getScale$() == null ? null : type.getScale$().text().intValue(), type.getMin$() == null ? null : type.getMin$().text(), type.getMax$() == null ? null : type.getMax$().text());
}
if (column instanceof $Date) {
final $Date type = ($Date) column;
if (type.getSqlxGenerateOnInsert$() != null) {
if ($Date.GenerateOnInsert$.TIMESTAMP.text().equals(type.getSqlxGenerateOnInsert$().text()))
generateOnInsert = GenerateOn.TIMESTAMP;
else
throw new GeneratorExecutionException("Unknown generateOnInsert specification: " + type.getSqlxGenerateOnInsert$().text());
}
if (type.getSqlxGenerateOnUpdate$() != null) {
if ($Date.GenerateOnUpdate$.TIMESTAMP.text().equals(type.getSqlxGenerateOnUpdate$().text())) {
if (isPrimary)
throw new GeneratorExecutionException("Primary column \"" + table.getName$().text() + "." + column.getName$().text() + "\" cannot specify generateOnUpdate");
generateOnUpdate = GenerateOn.TIMESTAMP;
} else {
throw new GeneratorExecutionException("Unknown generateOnUpdate specification: " + type.getSqlxGenerateOnUpdate$().text());
}
}
return new Type(table, column, isPrimary, data.DATE.class, commonParams, type.getDefault$() == null ? null : type.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate);
}
if (column instanceof $Time) {
final $Time type = ($Time) column;
if (type.getSqlxGenerateOnInsert$() != null) {
if ($Time.GenerateOnInsert$.TIMESTAMP.text().equals(type.getSqlxGenerateOnInsert$().text()))
generateOnInsert = GenerateOn.TIMESTAMP;
else
throw new GeneratorExecutionException("Unknown generateOnInsert specification: " + type.getSqlxGenerateOnInsert$().text());
}
if (type.getSqlxGenerateOnUpdate$() != null) {
if ($Time.GenerateOnUpdate$.TIMESTAMP.text().equals(type.getSqlxGenerateOnUpdate$().text())) {
if (isPrimary)
throw new GeneratorExecutionException("Primary column \"" + table.getName$().text() + "." + column.getName$().text() + "\" cannot specify generateOnUpdate");
generateOnUpdate = GenerateOn.TIMESTAMP;
} else {
throw new GeneratorExecutionException("Unknown generateOnUpdate specification: " + type.getSqlxGenerateOnUpdate$().text());
}
}
return new Type(table, column, isPrimary, data.TIME.class, commonParams, type.getDefault$() == null ? null : type.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, type.getPrecision$() == null ? null : type.getPrecision$().text());
}
if (column instanceof $Datetime) {
final $Datetime type = ($Datetime) column;
if (type.getSqlxGenerateOnInsert$() != null) {
if ($Datetime.GenerateOnInsert$.TIMESTAMP.text().equals(type.getSqlxGenerateOnInsert$().text()))
generateOnInsert = GenerateOn.TIMESTAMP;
else
throw new GeneratorExecutionException("Unknown generateOnInsert specification: " + type.getSqlxGenerateOnInsert$().text());
}
if (type.getSqlxGenerateOnUpdate$() != null) {
if ($Datetime.GenerateOnUpdate$.TIMESTAMP.text().equals(type.getSqlxGenerateOnUpdate$().text())) {
if (isPrimary)
throw new GeneratorExecutionException("Primary column \"" + table.getName$().text() + "." + column.getName$().text() + "\" cannot specify generateOnUpdate");
generateOnUpdate = GenerateOn.TIMESTAMP;
} else {
throw new GeneratorExecutionException("Unknown generateOnUpdate specification: " + type.getSqlxGenerateOnUpdate$().text());
}
}
return new Type(table, column, isPrimary, data.DATETIME.class, commonParams, type.getDefault$() == null ? null : type.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate, type.getPrecision$() == null ? null : type.getPrecision$().text());
}
if (column instanceof $Boolean) {
final $Boolean type = ($Boolean) column;
return new Type(table, column, isPrimary, data.BOOLEAN.class, commonParams, type.getDefault$() == null ? null : type.getDefault$().text(), generateOnInsert, generateOnUpdate, isKeyForUpdate);
}
if (column instanceof $Enum) {
final $Enum type = ($Enum) column;
return new Type(table, column, isPrimary, data.ENUM.class, commonParams, type.getDefault$() == null ? null : getClassNameOfEnum(table, type).append('.').append(enumStringToEnum(type.getDefault$().text())), generateOnInsert, generateOnUpdate, isKeyForUpdate);
}
throw new IllegalArgumentException("Unknown type: " + cls);
}
Also used :
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Char(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Char)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Tinyint(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Tinyint)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Decimal(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Decimal)
org.jaxdb.jsql.data(org.jaxdb.jsql.data)
GeneratorExecutionException(org.jaxdb.ddlx.GeneratorExecutionException)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Bigint(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Bigint)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Named(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Named)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Enum(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Enum)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Boolean(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Boolean)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Clob(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Clob)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Datetime(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Datetime)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Smallint(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Smallint)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Integer(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Integer)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Float(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Float)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Double(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Double)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Date(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Date)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Time(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Time)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Int(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Int)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Blob(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Blob)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Binary(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Binary)
Example 12 with org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index
use of org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index in project jaxdb by jaxdb.
the class Generator method makeTable.
private String makeTable(final Table table, final Map<String, Table> tableNameToTable) throws GeneratorExecutionException {
final String tableName = table.getName$().text();
final Info info = new Info();
final Type[] types = getTypes(table, tableNameToTable, 0, info);
final int noColumnsLocal = table.getColumn() == null ? 0 : table.getColumn().size();
final int noColumnsTotal = types.length;
final String classSimpleName = Identifiers.toClassCase(tableName);
final String className = schemaClassName + "." + classSimpleName;
final String instanceName = Identifiers.toInstanceCase(tableName);
final StringBuilder out = new StringBuilder();
if (!table.getAbstract$().text()) {
out.append("\n private static final ").append(className).append(" $").append(instanceName).append(" = new ").append(className).append("(false, false);\n\n");
out.append(" public static ").append(className).append(' ').append(classSimpleName).append("() {\n");
out.append(" return $").append(instanceName).append(";\n");
out.append(" }\n");
}
final String ext = table.getExtends$() == null ? data.Table.class.getCanonicalName() + "<" + className + ">" : Identifiers.toClassCase(table.getExtends$().text());
final String abs = table.getAbstract$().text() ? " abstract" : "";
out.append(getDoc(table, 1, '\0', '\n'));
out.append("\n public").append(abs).append(" static class ").append(classSimpleName).append(" extends ").append(ext).append(" {\n");
if (table.getExtends$() == null) {
out.append(" private final ").append(Key.class.getName()).append('<').append(className).append("> _primaryKey$ = new ").append(Key.class.getName()).append("<>(this);\n\n");
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" public final ").append(Key.class.getName()).append('<').append(className).append("> getKey() {\n");
out.append(" return _primaryKey$;\n");
out.append(" }\n\n");
}
if (!table.getAbstract$().text()) {
out.append(" private static final ").append(String.class.getName()).append("[] _columnName$ = {");
for (int i = 0; i < noColumnsTotal; ++i) // FIXME: Hacking this to record what is the index of each column
types[i].column.text(String.valueOf(i));
final List<$Column> sortedColumns = new ArrayList<>();
for (final Type type : types) sortedColumns.add(type.column);
sortedColumns.sort(namedComparator);
for (final $Column column : sortedColumns) out.append("\"").append(column.getName$().text()).append("\", ");
out.setCharAt(out.length() - 2, '}');
out.setCharAt(out.length() - 1, ';');
out.append("\n");
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" ").append(String.class.getName()).append("[] _columnName$() {\n");
out.append(" return _columnName$;\n");
out.append(" }\n\n");
out.append(" private static final byte[] _columnIndex$ = {");
for (final $Column column : sortedColumns) out.append(column.text()).append(", ");
out.setCharAt(out.length() - 2, '}');
out.setCharAt(out.length() - 1, ';');
out.append('\n');
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" byte[] _columnIndex$() {\n");
out.append(" return _columnIndex$;\n");
out.append(" }\n\n");
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" public ").append(String.class.getName()).append(" getName() {\n");
out.append(" return \"").append(tableName).append("\";\n");
out.append(" }\n\n");
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" ").append(className).append(" newInstance() {\n");
out.append(" return new ").append(className).append("(true, true);\n");
out.append(" }\n\n");
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" ").append(className).append(" immutable() {\n");
out.append(" return $").append(instanceName).append(";\n");
out.append(" }\n\n");
final StringBuilder init = new StringBuilder();
newColumnArray(init, noColumnsTotal).append(", ");
newColumnArray(init, info.totalPrimaryCount.count).append(", ");
newColumnArray(init, info.totalKeyForUpdateCount.count).append(", ");
newColumnArray(init, info.totalAutoCount.count);
out.append(" ").append(classSimpleName).append("(final boolean _mutable$, final boolean _wasSelected$) {\n");
out.append(" this(_mutable$, _wasSelected$, ").append(init).append(", null, false);\n");
out.append(" }\n\n");
out.append(" /** Creates a new {@link ").append(className).append("}. */\n");
out.append(" public ").append(classSimpleName).append("() {\n");
out.append(" this(null, false);\n");
out.append(" }\n\n");
// Constructor with primary key columns
if (info.totalPrimaryCount.count > 0) {
final StringBuilder set = new StringBuilder();
out.append(" /** Creates a new {@link ").append(className).append("} with the specified primary key. */\n");
out.append(" public ").append(classSimpleName).append("(");
final StringBuilder params = new StringBuilder();
for (final Type type : types) {
if (type.isPrimary) {
params.append(type.makeParam()).append(", ");
final String fieldName = Identifiers.toCamelCase(type.column.getName$().text());
set.append(" this.").append(fieldName).append(".set(").append(fieldName).append(");\n");
}
}
params.setLength(params.length() - 2);
out.append(params).append(") {\n");
out.append(" this();\n");
if (set.length() > 0) {
set.setLength(set.length() - 1);
out.append(set);
}
out.append("\n }\n\n");
}
// Copy constructor
out.append(" /** Creates a new {@link ").append(className).append("} as a copy of the specified {@link ").append(className).append("} instance. */\n");
out.append(" public ").append(classSimpleName).append("(final ").append(className).append(" copy) {\n");
out.append(" this(copy, true);\n");
out.append(" }\n\n");
out.append(" /** Creates a new {@link ").append(className).append("} as a copy of the specified {@link ").append(className).append("} instance. */\n");
out.append(" ").append(classSimpleName).append("(final ").append(className).append(" copy, final boolean wasSet) {\n");
out.append(" this(true, false, ").append(init).append(", copy, wasSet);\n");
out.append(" }\n\n");
}
out.append(" ").append(classSimpleName).append("(final boolean _mutable$, final boolean _wasSelected$, final ").append(data.Column.class.getCanonicalName()).append("<?>[] _column$, final ").append(data.Column.class.getCanonicalName()).append("<?>[] _primary$, final ").append(data.Column.class.getCanonicalName()).append("<?>[] _keyForUpdate$, final ").append(data.Column.class.getCanonicalName()).append("<?>[] _auto$, final ").append(className).append(" copy, final boolean wasSet) {\n");
out.append(" super(_mutable$, _wasSelected$, _column$, _primary$, _keyForUpdate$, _auto$");
if (table.getExtends$() != null)
out.append(", copy, wasSet");
out.append(");\n");
int primaryIndex = info.totalPrimaryCount.offset;
int keyForUpdateIndex = info.totalKeyForUpdateCount.offset;
int autoIndex = info.totalAutoCount.offset;
for (int s = types.length - noColumnsLocal, i = s; i < types.length; ++i) {
if (i > s)
out.append('\n');
final Type type = types[i];
out.append(" _column$[").append(i).append("] = ");
if (type.isPrimary)
out.append("_primary$[").append(primaryIndex++).append("] = ");
if (type.keyForUpdate)
out.append("_keyForUpdate$[").append(keyForUpdateIndex++).append("] = ");
if (org.jaxdb.ddlx.Generator.isAuto(type.column))
out.append("_auto$[").append(autoIndex++).append("] = ");
type.assignColumn(out);
}
out.append('\n');
out.append(" if (copy != null) {\n");
for (int s = types.length - noColumnsLocal, i = s; i < types.length; ++i) {
if (i > s)
out.append('\n');
final Type type = types[i];
final String fieldName = Identifiers.toCamelCase(type.column.getName$().text());
out.append(" this.").append(fieldName).append(".copy(copy.").append(fieldName).append(", wasSet);");
}
out.append("\n }\n");
out.append(" }\n\n");
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" void _merge$(final ").append(info.rootClassName).append(" table, final ").append(data.class.getName()).append(".Merge merge) {\n");
if (table.getExtends$() != null) {
out.append(" super._merge$(table, merge);\n");
out.append(" final ").append(className).append(" t = (").append(className).append(")table;\n");
} else {
out.append(" final ").append(className).append(" t = table;\n");
}
boolean hasColumnsToMerge = false;
for (int s = types.length - noColumnsLocal, i = s; i < types.length; ++i) {
final Type type = types[i];
if (!type.isPrimary) {
if (hasColumnsToMerge)
out.append('\n');
hasColumnsToMerge = true;
final String fieldName = Identifiers.toCamelCase(type.column.getName$().text());
out.append(" if (t.").append(fieldName).append(".wasSet() || merge != null && ").append(fieldName).append(".generateOnUpdate != null)\n");
out.append(" ").append(fieldName).append(".copy(t.").append(fieldName).append(", true);\n");
}
}
out.append(" }\n");
for (int s = types.length - noColumnsLocal, i = s; i < types.length; ++i) out.append(types[i].declareColumn());
out.append("\n\n");
if (table.getAbstract$().text()) {
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" public abstract ").append(className).append(" clone();\n\n");
} else {
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" public ").append(className).append(" clone() {\n");
out.append(" return new ").append(className).append("(this, false);\n");
out.append(" }\n\n");
}
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" public boolean equals(final ").append(Object.class.getName()).append(" obj) {\n");
out.append(" if (obj == this)\n");
out.append(" return true;\n\n");
out.append(" if (!(obj instanceof ").append(className).append("))\n");
out.append(" return false;\n\n");
if (table.getExtends$() != null) {
out.append(" if (!super.equals(obj))\n");
out.append(" return false;\n\n");
}
out.append(" final ").append(className).append(" that = (").append(className).append(")obj;");
for (int s = types.length - noColumnsLocal, i = s; i < types.length; ++i) {
final Type type = types[i];
out.append("\n if (this.").append(type.getInstanceName()).append(".isNull() ? !that.").append(type.getInstanceName()).append(".isNull() : !this.").append(type.getInstanceName()).append(".get().equals(that.").append(type.getInstanceName()).append(".get()))");
out.append("\n return false;\n");
}
out.append("\n return true;");
out.append("\n }\n\n");
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" public int hashCode() {\n");
if (table.getExtends$() != null)
out.append(" int hashCode = super.hashCode();");
else
out.append(" int hashCode = ").append(tableName.hashCode()).append(";");
for (int s = types.length - noColumnsLocal, i = s; i < types.length; ++i) {
final Type type = types[i];
out.append("\n if (!this.").append(type.getInstanceName()).append(".isNull())");
out.append("\n hashCode = 31 * hashCode + this.").append(type.getInstanceName()).append(".get().hashCode();\n");
}
out.append("\n return hashCode;");
out.append("\n }\n\n");
out.append(" @").append(Override.class.getName()).append('\n');
out.append(" protected void toString(final boolean wasSetOnly, final ").append(StringBuilder.class.getName()).append(" s) {\n");
if (table.getExtends$() != null)
out.append(" super.toString(wasSetOnly, s);");
for (int s = types.length - noColumnsLocal, i = s; i < types.length; ++i) {
final Type type = types[i];
final boolean ifClause = !type.isPrimary && !type.keyForUpdate;
if (ifClause)
out.append(" if (!wasSetOnly || this.").append(type.getInstanceName()).append(".wasSet)\n ");
out.append(" s.append(\",\\\"").append(type.column.getName$().text()).append("\\\":\").append(this.").append(type.getInstanceName()).append(".toJson());\n");
if (ifClause)
out.append('\n');
}
out.append(" if (s.length() > 0)\n");
out.append(" s.setCharAt(0, '{');\n");
out.append(" else\n");
out.append(" s.append('{');\n\n");
out.append(" s.append('}');");
out.append("\n }");
out.append("\n }");
return out.toString();
}
Also used :
org.jaxdb.jsql.data(org.jaxdb.jsql.data)
ArrayList(java.util.ArrayList)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Tinyint(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Tinyint)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Bigint(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Bigint)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Smallint(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Smallint)
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Column(org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Column)
Example 13 with org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index
use of org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index in project mzmine2 by mzmine.
the class NetCDFReadTask method readNextScan.
/**
* Reads one scan from the file. Requires that general information has already been read.
*/
private Scan readNextScan() throws IOException {
// Get scan starting position and length
int[] scanStartPosition = new int[1];
int[] scanLength = new int[1];
Integer[] startAndLength = scansIndex.get(scanNum);
// End of file
if (startAndLength == null) {
return null;
}
scanStartPosition[0] = startAndLength[0];
scanLength[0] = startAndLength[1];
// Get retention time of the scan
Double retentionTime = scansRetentionTimes.get(scanNum);
if (retentionTime == null) {
logger.severe("Could not find retention time for scan " + scanNum);
throw (new IOException("Could not find retention time for scan " + scanNum));
}
// An empty scan needs special attention..
if (scanLength[0] == 0) {
scanNum++;
return new SimpleScan(null, scanNum, 1, retentionTime.doubleValue(), 0, 0, null, new DataPoint[0], MassSpectrumType.CENTROIDED, PolarityType.UNKNOWN, "", null);
}
// Is there any way how to extract polarity from netcdf?
PolarityType polarity = PolarityType.UNKNOWN;
// Is there any way how to extract scan definition from netcdf?
String scanDefinition = "";
// Read mass and intensity values
Array massValueArray;
Array intensityValueArray;
try {
massValueArray = massValueVariable.read(scanStartPosition, scanLength);
intensityValueArray = intensityValueVariable.read(scanStartPosition, scanLength);
} catch (Exception e) {
logger.log(Level.SEVERE, "Could not read from variables mass_values and/or intensity_values.", e);
throw (new IOException("Could not read from variables mass_values and/or intensity_values."));
}
Index massValuesIndex = massValueArray.getIndex();
Index intensityValuesIndex = intensityValueArray.getIndex();
int arrayLength = massValueArray.getShape()[0];
DataPoint[] dataPoints = new DataPoint[arrayLength];
for (int j = 0; j < arrayLength; j++) {
Index massIndex0 = massValuesIndex.set0(j);
Index intensityIndex0 = intensityValuesIndex.set0(j);
double mz = massValueArray.getDouble(massIndex0) * massValueScaleFactor;
double intensity = intensityValueArray.getDouble(intensityIndex0) * intensityValueScaleFactor;
dataPoints[j] = new SimpleDataPoint(mz, intensity);
}
scanNum++;
// Auto-detect whether this scan is centroided
MassSpectrumType spectrumType = ScanUtils.detectSpectrumType(dataPoints);
SimpleScan buildingScan = new SimpleScan(null, scanNum, 1, retentionTime.doubleValue(), 0, 0, null, dataPoints, spectrumType, polarity, scanDefinition, null);
return buildingScan;
}
Also used :
PolarityType(net.sf.mzmine.datamodel.PolarityType)
Index(ucar.ma2.Index)
MassSpectrumType(net.sf.mzmine.datamodel.MassSpectrumType)
IOException(java.io.IOException)
IOException(java.io.IOException)
DataPoint(net.sf.mzmine.datamodel.DataPoint)
SimpleDataPoint(net.sf.mzmine.datamodel.impl.SimpleDataPoint)
Array(ucar.ma2.Array)
SimpleScan(net.sf.mzmine.datamodel.impl.SimpleScan)
SimpleDataPoint(net.sf.mzmine.datamodel.impl.SimpleDataPoint)
DataPoint(net.sf.mzmine.datamodel.DataPoint)
SimpleDataPoint(net.sf.mzmine.datamodel.impl.SimpleDataPoint)
Example 14 with org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index
use of org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index in project imageio-ext by geosolutions-it.
the class HOPSConverter method setTimeVariableAttributes.
// ////////////////////////////////////////////////////////////////////////
//
// HELPERS !!!
//
// ////////////////////////////////////////////////////////////////////////
private float setTimeVariableAttributes(Variable time_0, NetcdfFileWriteable ncFileOut) throws IOException {
Array time_0_Data = time_0.read();
Index time_0_Index = time_0_Data.getIndex();
final String name = time_0.getName();
final float referenceTime = time_0_Data.getFloat(time_0_Index.set(0));
float fTime = referenceTime;
Attribute offset = time_0.findAttribute("add_offset");
if (offset != null)
fTime += offset.getNumericValue().floatValue();
GregorianCalendar calendar = null;
if (time_0.getDescription().toLowerCase().contains("modified julian")) {
calendar = NetCDFConverterUtilities.fromModifiedJulian(fTime, time_0.getDescription(), time_0.getUnitsString());
} else {
calendar = NetCDFConverterUtilities.fromJulian(fTime);
}
final String year = Integer.toString(calendar.get(Calendar.YEAR));
final String month = Integer.toString((calendar.get(Calendar.MONTH) + 1));
final String day = Integer.toString(calendar.get(Calendar.DAY_OF_MONTH));
String hour = Integer.toString(calendar.get(Calendar.HOUR));
if (hour.equalsIgnoreCase("0"))
hour += "0";
String minute = Integer.toString(calendar.get(Calendar.MINUTE));
if (minute.equalsIgnoreCase("0"))
minute += "0";
String second = Integer.toString(calendar.get(Calendar.SECOND));
if (second.equalsIgnoreCase("0"))
second += "0";
final String millisecond = Integer.toString(calendar.get(Calendar.MILLISECOND));
final StringBuffer sbTime = new StringBuffer(year).append("-").append(month).append("-").append(day).append(" ").append(hour).append(":").append(minute).append(":").append(second).append(".").append(millisecond);
ncFileOut.addVariableAttribute(name, "units", "days since " + sbTime.toString());
ncFileOut.addVariableAttribute(name, "long_name", "time");
return referenceTime;
}
Also used :
Array(ucar.ma2.Array)
Attribute(ucar.nc2.Attribute)
GregorianCalendar(java.util.GregorianCalendar)
Index(ucar.ma2.Index)
Example 15 with org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index
use of org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Index in project imageio-ext by geosolutions-it.
the class HOPSConverter method runTest.
public void runTest() throws IOException {
try {
final NetcdfFile ncFileIn = NetcdfFile.open(inputFile.getAbsolutePath());
final File outDir = /*createTodayDirectory(this.outDir)*/
new File("C:/work/data/testWritten/");
// keep original name
final File outputFile = File.createTempFile(inputFile.getName(), ".tmp");
final NetcdfFileWriteable ncFileOut = NetcdfFileWriteable.createNew(outputFile.getAbsolutePath());
// input dimensions
Dimension timeDim0 = ncFileIn.findDimension("time");
Dimension latDim0 = ncFileIn.findDimension("lat");
Dimension lonDim0 = ncFileIn.findDimension("lon");
// input variables
Variable time_0 = ncFileIn.findVariable("time");
Array time_0_Data = time_0.read();
Index time_0_Index = time_0_Data.getIndex();
Variable lon_0 = ncFileIn.findVariable("lon");
final int nLon = lon_0.getDimension(0).getLength();
Variable lat_0 = ncFileIn.findVariable("lat");
final int nLat = lat_0.getDimension(0).getLength();
Array lat_0_Data = lat_0.read();
Index lat_0_Index = lat_0_Data.getIndex();
Array lon_0_Data = lon_0.read();
Index lon_0_Index = lon_0_Data.getIndex();
// Depth
Variable z_0 = ncFileIn.findVariable("z");
final int nLevels = z_0.getDimension(0).getLength();
Array z_0_Data = z_0.read();
Index z_0_Index = z_0_Data.getIndex();
Dimension timeDim = ncFileOut.addDimension("time", timeDim0.getLength());
Dimension latDim = ncFileOut.addDimension(NetCDFUtilities.LAT, latDim0.getLength());
Dimension lonDim = ncFileOut.addDimension(NetCDFUtilities.LON, lonDim0.getLength());
Dimension depthDim = ncFileOut.addDimension(NetCDFUtilities.DEPTH, nLevels);
// writing file
computeMatrixExtremes(lat_0_Data, lon_0_Data, lonDim0.getLength(), latDim0.getLength(), lat_0_Index, lon_0_Index);
NetCDFConverterUtilities.copyGlobalAttributes(ncFileOut, ncFileIn.getGlobalAttributes());
// //
//
// Time requires a special Management
//
// //
// time Variable
ncFileOut.addVariable("time", DataType.FLOAT, new Dimension[] { timeDim });
// ncFileOut.addVariableAttribute("Time", "long_name", "Time");
final float referenceTime = setTimeVariableAttributes(time_0, ncFileOut);
// lat Variable
ArrayFloat lat_1_Data = new ArrayFloat(new int[] { latDim0.getLength() });
Index lat_1_Index = lat_1_Data.getIndex();
ncFileOut.addVariable(NetCDFUtilities.LAT, DataType.FLOAT, new Dimension[] { latDim });
ncFileOut.addVariableAttribute(NetCDFUtilities.LAT, "long_name", NetCDFUtilities.LATITUDE);
ncFileOut.addVariableAttribute(NetCDFUtilities.LAT, UNITS, lat_0.getUnitsString());
for (int yPos = 0; yPos < latDim0.getLength(); yPos++) {
lat_1_Data.setFloat(lat_1_Index.set(yPos), new Float(this.ymax - (new Float(yPos).floatValue() * this.periodY)).floatValue());
// new Float(
// this.ymin
// + (new Float(yPos)
// .floatValue() * this.periodY))
// .floatValue());
}
// lon Variable
ArrayFloat lon_1_Data = new ArrayFloat(new int[] { lonDim0.getLength() });
Index lon_1_Index = lon_1_Data.getIndex();
ncFileOut.addVariable(NetCDFUtilities.LON, DataType.FLOAT, new Dimension[] { lonDim });
ncFileOut.addVariableAttribute(NetCDFUtilities.LON, "long_name", NetCDFUtilities.LONGITUDE);
ncFileOut.addVariableAttribute(NetCDFUtilities.LON, UNITS, lon_0.getUnitsString());
for (int xPos = 0; xPos < lonDim0.getLength(); xPos++) {
lon_1_Data.setFloat(lon_1_Index.set(xPos), new Float(this.xmin + (new Float(xPos).floatValue() * this.periodX)).floatValue());
}
// depth level Variable
ArrayFloat depthlevelDim_1_Data = new ArrayFloat(new int[] { depthDim.getLength() });
Index depthlevelDim_1_Index = depthlevelDim_1_Data.getIndex();
ncFileOut.addVariable(NetCDFUtilities.DEPTH, DataType.FLOAT, new Dimension[] { depthDim });
ncFileOut.addVariableAttribute(NetCDFUtilities.DEPTH, "long_name", NetCDFUtilities.DEPTH);
ncFileOut.addVariableAttribute(NetCDFUtilities.DEPTH, UNITS, z_0.getUnitsString());
ncFileOut.addVariableAttribute(NetCDFUtilities.DEPTH, "positive", "up");
for (int wPos = 0; wPos < depthDim.getLength(); wPos++) {
depthlevelDim_1_Data.setFloat(depthlevelDim_1_Index.set(wPos), z_0_Data.getFloat(depthlevelDim_1_Index));
}
// {} Variables
for (int i = 0; i < NUMVARS; i++) {
String varName = (String) variables.get(i);
Variable var = ncFileIn.findVariable(varName);
ncFileOut.addVariable(varName, var.getDataType(), new Dimension[] { timeDim, depthDim, latDim, lonDim });
NetCDFConverterUtilities.setVariableAttributes(var, ncFileOut, new String[] { "positions" });
}
// writing bin data ...
ncFileOut.create();
ArrayFloat timeData = new ArrayFloat(new int[] { timeDim.getLength() });
Index timeIndex = timeData.getIndex();
for (int t = 0; t < timeDim.getLength(); t++) {
float julianTime = time_0_Data.getFloat(time_0_Index.set(t)) - referenceTime;
timeData.setFloat(timeIndex.set(t), julianTime);
}
ncFileOut.write("time", timeData);
Variable timeVar = ncFileOut.findVariable("time");
timeDim.addCoordinateVariable(timeVar);
ncFileOut.write(NetCDFUtilities.LAT, lat_1_Data);
ncFileOut.write(NetCDFUtilities.LON, lon_1_Data);
Variable depthVar = ncFileOut.findVariable("depth");
depthDim.addCoordinateVariable(depthVar);
ncFileOut.write(NetCDFUtilities.DEPTH, depthlevelDim_1_Data);
// TODO: AutoApply MASK?
ArrayFloat maskMatrix = new ArrayFloat.D2(latDim.getLength(), lonDim.getLength());
Index maskIma = maskMatrix.getIndex();
if (APPLY_MASK) {
Variable mask = ncFileIn.findVariable("mask");
Array maskData = mask.read();
Index maskIndex = maskData.getIndex();
ArrayFloat tempData = new ArrayFloat(new int[] { latDim0.getLength(), lonDim0.getLength() });
Index tempIndex = tempData.getIndex();
for (int yPos = 0; yPos < latDim0.getLength(); yPos++) {
for (int xPos = 0; xPos < lonDim0.getLength(); xPos++) {
tempData.setFloat(tempIndex.set(yPos, xPos), maskData.getFloat(maskIndex.set(yPos, xPos)));
}
}
WritableRaster outData = Resampler(lat_0_Data, lon_0_Data, lonDim0.getLength(), latDim0.getLength(), 2, tempData, -1);
for (int j = 0; j < latDim0.getLength(); j++) {
for (int k = 0; k < lonDim0.getLength(); k++) {
float sample = outData.getSampleFloat(k, j, 0);
maskMatrix.setFloat(maskIma.set(j, k), sample);
}
}
}
for (int i = 0; i < NUMVARS; i++) {
String varName = (String) variables.get(i);
Variable var = ncFileIn.findVariable(varName);
Array originalVarData = var.read();
Index varIndex = originalVarData.getIndex();
Attribute fv = var.findAttribute("_FillValue");
float fillValue = Float.NaN;
if (fv != null) {
fillValue = (fv.getNumericValue()).floatValue();
}
ArrayFloat T_tmp_Data = new ArrayFloat(new int[] { latDim0.getLength(), lonDim0.getLength() });
Index T_tmp_Index = T_tmp_Data.getIndex();
ArrayFloat Tmatrix = new ArrayFloat.D4(timeDim.getLength(), depthDim.getLength(), latDim.getLength(), lonDim.getLength());
Index Tima = Tmatrix.getIndex();
for (int tPos = 0; tPos < timeDim0.getLength(); tPos++) {
for (int levelPos = 0; levelPos < depthDim.getLength(); levelPos++) {
for (int yPos = 0; yPos < latDim0.getLength(); yPos++) {
for (int xPos = 0; xPos < lonDim0.getLength(); xPos++) {
T_tmp_Data.setFloat(T_tmp_Index.set(yPos, xPos), originalVarData.getFloat(varIndex.set(tPos, yPos, xPos, levelPos)));
}
}
WritableRaster outData = Resampler(lat_0_Data, lon_0_Data, lonDim0.getLength(), latDim0.getLength(), 2, T_tmp_Data, fillValue);
for (int j = 0; j < latDim0.getLength(); j++) {
for (int k = 0; k < lonDim0.getLength(); k++) {
float sample = outData.getSampleFloat(k, j, 0);
if (APPLY_MASK) {
float maskValue = maskMatrix.getFloat(maskIma.set(j, k));
if (maskValue == 0)
sample = fillValue;
}
Tmatrix.setFloat(Tima.set(tPos, levelPos, j, k), sample);
}
}
}
}
ncFileOut.write(varName, Tmatrix);
}
ncFileOut.close();
outputFile.renameTo(new File(outDir + File.separator + inputFile.getName()));
} catch (Exception e) {
// something bad happened
if (LOGGER.isLoggable(Level.INFO))
LOGGER.log(Level.INFO, e.getLocalizedMessage(), e);
JAI.getDefaultInstance().getTileCache().flush();
}
}
Also used :
NetcdfFileWriteable(ucar.nc2.NetcdfFileWriteable)
Variable(ucar.nc2.Variable)
Attribute(ucar.nc2.Attribute)
Index(ucar.ma2.Index)
ArrayFloat(ucar.ma2.ArrayFloat)
Dimension(ucar.nc2.Dimension)
IOException(java.io.IOException)
NetcdfFile(ucar.nc2.NetcdfFile)
Array(ucar.ma2.Array)
ArrayFloat(ucar.ma2.ArrayFloat)
WritableRaster(java.awt.image.WritableRaster)
File(java.io.File)
NetcdfFile(ucar.nc2.NetcdfFile)
Aggregations
Index (ucar.ma2.Index)30
ArrayList (java.util.ArrayList)21
Array (ucar.ma2.Array)20
Test (org.junit.Test)12
IOException (java.io.IOException)11
Attribute (ucar.nc2.Attribute)11
AbstractMessage (com.google.protobuf.AbstractMessage)10
WritableRaster (java.awt.image.WritableRaster)10
ArrayFloat (ucar.ma2.ArrayFloat)10
Index (com.google.firestore.admin.v1.Index)9
Dimension (ucar.nc2.Dimension)9
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Bigint (org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Bigint)8
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Smallint (org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Smallint)8
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Tinyint (org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Tinyint)8
NetcdfFileWriteable (ucar.nc2.NetcdfFileWriteable)8
Variable (ucar.nc2.Variable)8
org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Column (org.jaxdb.www.ddlx_0_5.xLygluGCXAA.$Column)7
File (java.io.File)5
List (java.util.List)5
ArrayDouble (ucar.ma2.ArrayDouble)5
