Examples with Query org.molgenis.api.model.Query used on opensource projects

Example 1 with Query

use of org.molgenis.api.model.Query in project molgenis by molgenis.

the class DataServiceV3ImplTest method testFindAll.

@SuppressWarnings("unchecked")
@Test
void testFindAll() {
    String entityTypeId = "MyEntityType";
    Selection filter = Selection.FULL_SELECTION;
    Selection expand = Selection.EMPTY_SELECTION;
    EntityType entityType = mock(EntityType.class);
    Repository<Entity> repository = mock(Repository.class);
    when(repository.getEntityType()).thenReturn(entityType);
    Entity entity1 = mock(Entity.class);
    Entity entity2 = mock(Entity.class);
    Sort sort = Sort.create("field", Direction.ASC);
    Fetch fetch = new Fetch().field("id", new Fetch().field("refAttr"));
    Query q = Query.builder().setOperator(Operator.MATCHES).setValue("value").build();
    org.molgenis.data.Query<Entity> findAllQuery = mock(org.molgenis.data.Query.class);
    org.molgenis.data.Sort dataSort = mock(org.molgenis.data.Sort.class);
    org.molgenis.data.Query<Entity> findQuery = new QueryImpl<>(findAllQuery);
    findQuery.fetch(fetch);
    findQuery.offset(10);
    findQuery.pageSize(10);
    findQuery.sort(dataSort);
    org.molgenis.data.Query<Entity> countQuery = new QueryImpl<>(findAllQuery);
    countQuery.offset(0);
    countQuery.pageSize(Integer.MAX_VALUE);
    when(repository.findAll(findQuery)).thenReturn(Stream.of(entity1, entity2));
    when(repository.count(countQuery)).thenReturn(100L);
    when(queryMapper.map(q, repository)).thenReturn(findAllQuery).thenReturn(countQuery);
    when(sortMapper.map(sort, entityType)).thenReturn(dataSort);
    when(metaDataService.getRepository(entityTypeId)).thenReturn(Optional.of(repository));
    Entities actual = dataServiceV3Impl.findAll(entityTypeId, q, filter, expand, sort, 10, 1);
    assertEquals(actual, Entities.builder().setEntities(asList(entity1, entity2)).setTotal(100).build());
}

Example 2 with Query

use of org.molgenis.api.model.Query in project molgenis by molgenis.

the class DataServiceV3ImplTest method testFindFieldUnsupportedAttributeType.

@SuppressWarnings("unchecked")
@Test
void testFindFieldUnsupportedAttributeType() {
    String entityTypeId = "MyEntityType";
    String entityId = "MyEntity";
    String fieldId = "MyField";
    Selection filter = Selection.FULL_SELECTION;
    Selection expand = Selection.EMPTY_SELECTION;
    Attribute idAttribute = mock(Attribute.class, "id");
    when(idAttribute.getDataType()).thenReturn(STRING);
    Attribute mrefAttribute = mock(Attribute.class, "mref");
    when(mrefAttribute.getDataType()).thenReturn(STRING);
    EntityType entityType = mock(EntityType.class, "entityType");
    when(entityType.getIdAttribute()).thenReturn(idAttribute);
    when(entityType.getAttribute(fieldId)).thenReturn(mrefAttribute);
    Repository<Entity> repository = mock(Repository.class);
    when(repository.getEntityType()).thenReturn(entityType);
    Fetch fetch = new Fetch().field("MyField", new Fetch().field("id"));
    Sort sort = Sort.create("field", Direction.ASC);
    Query q = Query.builder().setOperator(Operator.MATCHES).setValue("value").build();
    org.molgenis.data.Query<Entity> findAllQuery = mock(org.molgenis.data.Query.class);
    org.molgenis.data.Sort dataSort = mock(org.molgenis.data.Sort.class);
    org.molgenis.data.Query<Entity> findQuery = new QueryImpl<>(findAllQuery);
    findQuery.fetch(fetch);
    findQuery.offset(10);
    findQuery.pageSize(10);
    findQuery.sort(dataSort);
    org.molgenis.data.Query<Entity> countQuery = new QueryImpl<>(findAllQuery);
    countQuery.offset(0);
    countQuery.pageSize(Integer.MAX_VALUE);
    doReturn(Optional.of(repository)).when(metaDataService).getRepository(entityTypeId);
    assertThrows(UnsupportedAttributeTypeException.class, () -> dataServiceV3Impl.findSubresources(entityTypeId, entityId, fieldId, q, filter, expand, sort, 10, 1));
}

Example 3 with Query

use of org.molgenis.api.model.Query in project molgenis by molgenis.

the class EntityControllerTest method testGetEntities.

@Test
void testGetEntities() {
    String entityTypeId = "MyEntityTypeId";
    Selection filter = Selection.FULL_SELECTION;
    Selection expand = Selection.FULL_SELECTION;
    Query query = Query.builder().setOperator(Operator.MATCHES).setValue("value").build();
    Sort sort = Sort.create("field", Direction.ASC);
    ReadEntitiesRequest entityRequest = new ReadEntitiesRequest();
    entityRequest.setEntityTypeId(entityTypeId);
    entityRequest.setQ(query);
    entityRequest.setSort(sort);
    entityRequest.setFilter(filter);
    entityRequest.setExpand(expand);
    entityRequest.setSize(10);
    entityRequest.setPage(2);
    Entities entities = Entities.create(emptyList(), 30);
    when(dataServiceV3.findAll(entityTypeId, query, filter, expand, sort, 10, 2)).thenReturn(entities);
    EntityCollection entityCollection = EntityCollection.builder().setEntityTypeId(entityTypeId).setEntities(emptyList()).setPage(Page.builder().setOffset(20).setPageSize(10).setTotal(30).build()).build();
    EntitiesResponse entitiesResponse = mock(EntitiesResponse.class);
    when(entityMapper.map(entityCollection, filter, expand, 10, 2, 30)).thenReturn(entitiesResponse);
    assertEquals(entitiesResponse, entityController.getEntities(entityRequest));
}

Example 4 with Query

use of org.molgenis.api.model.Query in project molgenis by molgenis.

the class EntityController method deleteEntities.

@DeleteMapping("/{entityTypeId}")
@ResponseStatus(HttpStatus.NO_CONTENT)
public void deleteEntities(@Valid DeleteEntitiesRequest deleteRequest) {
    Query query = deleteRequest.getQ().orElse(null);
    dataServiceV3.deleteAll(deleteRequest.getEntityTypeId(), query);
}

Example 5 with Query

use of org.molgenis.api.model.Query in project molgenis by molgenis.

the class QueryMapperTest method testMapLessThanUnexpectedEnumException.

@Test
void testMapLessThanUnexpectedEnumException() {
    String value = "value";
    Query query = Query.builder().setItem("test").setOperator(Operator.LESS_THAN).setValue(value).build();
    Attribute attribute = mock(Attribute.class);
    Repository<Entity> repository = createMockRepository(attribute, AttributeType.STRING);
    assertThrows(UnexpectedEnumException.class, () -> queryMapper.map(query, repository));
}