Examples with EntityType org.molgenis.data.meta.model.EntityType used on opensource projects

Example 6 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class IndexDependencyModel method getReferencingEntities.

private Set<String> getReferencingEntities(String entityTypeId) {
    ImmutableSet.Builder<String> result = ImmutableSet.builder();
    EntityType entityType = entityTypes.get(entityTypeId);
    if (entityType == null) {
        return emptySet();
    }
    for (Map.Entry<String, EntityType> candidate : entityTypes.entrySet()) {
        EntityType candidateEntityType = candidate.getValue();
        if (hasAttributeThatReferences(candidateEntityType, entityTypeId)) {
            if (candidateEntityType.isAbstract()) {
                result.addAll(getDescendants(candidate.getKey()));
            } else {
                result.add(candidate.getKey());
            }
        }
    }
    return result.build();
}

Example 7 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class IndexBootstrapper method registerIndexAction.

private void registerIndexAction(IndexAction action) {
    String entityTypeId = action.getEntityTypeId();
    EntityType entityType = dataService.findOneById(ENTITY_TYPE_META_DATA, entityTypeId, EntityType.class);
    if (entityType != null) {
        Object typedEntityId = getTypedValue(action.getEntityId(), entityType.getIdAttribute());
        indexActionRegisterService.register(entityType, typedEntityId);
    }
}

Example 8 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class DataPersisterImpl method persistSecondPass.

private void persistSecondPass(DataProvider dataProvider, List<EntityType> topologicalSortedEntityTypes) {
    topologicalSortedEntityTypes.forEach(entityType -> {
        EntityType persistedEntityType = persistEntityTypeSecondPass(entityType);
        if (dataProvider.hasEntities(entityType)) {
            Stream<Entity> entities = dataProvider.getEntities(entityType);
            persistEntitiesSecondPass(persistedEntityType, entities);
        }
    });
}

Example 9 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class ImportWriter method groupEntityTypes.

private GroupedEntityTypes groupEntityTypes(ImmutableCollection<EntityType> entities) {
    return runAsSystem(() -> {
        Map<String, EntityType> existingEntityTypeMap = new HashMap<>();
        for (EntityType entityType : entities) {
            EntityType existing = metaDataService.getEntityTypeById(entityType.getId());
            if (existing != null) {
                existingEntityTypeMap.put(entityType.getId(), entityType);
            }
        }
        ImmutableCollection<EntityType> newEntityTypes = entities.stream().filter(entityType -> !existingEntityTypeMap.containsKey(entityType.getId())).collect(collectingAndThen(toList(), ImmutableList::copyOf));
        ImmutableCollection<EntityType> existingEntityTypes = entities.stream().filter(entityType -> existingEntityTypeMap.containsKey(entityType.getId())).collect(collectingAndThen(toList(), ImmutableList::copyOf));
        return new GroupedEntityTypes(newEntityTypes, existingEntityTypes);
    });
}

Example 10 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class FileMetaRepositoryDecoratorTest method setUpBeforeMethod.

@BeforeMethod
public void setUpBeforeMethod() {
    EntityType entityType = when(mock(EntityType.class).getLabel()).thenReturn("file metadata").getMock();
    when(delegateRepository.getEntityType()).thenReturn(entityType);
    when(fileStore.delete(anyString())).thenReturn(true);
    fileMetaRepositoryDecorator = new FileMetaRepositoryDecorator(delegateRepository, fileStore);
}