Examples with EntityType org.molgenis.data.meta.model.EntityType used on opensource projects

Example 11 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class EntityTypeRepositoryDecorator method addAndRemoveAttributesInBackend.

/**
 * Add and remove entity attributes in the backend for an {@link EntityType}.
 * If the {@link EntityType} is abstract, will update all concrete extending {@link EntityType}s.
 * Attribute updates are handled by the {@link AttributeRepositoryDecorator}.
 *
 * @param entityType {@link EntityType} containing the desired situation.
 */
private void addAndRemoveAttributesInBackend(EntityType entityType) {
    EntityType existingEntityType = delegate().findOneById(entityType.getId());
    Map<String, Attribute> attrsMap = toAttributesMap(entityType);
    Map<String, Attribute> existingAttrsMap = toAttributesMap(existingEntityType);
    dataService.getMeta().getConcreteChildren(entityType).forEach(concreteEntityType -> {
        RepositoryCollection backend = dataService.getMeta().getBackend(concreteEntityType);
        EntityType concreteExistingEntityType = delegate().findOneById(concreteEntityType.getId());
        addNewAttributesInBackend(attrsMap, existingAttrsMap, backend, concreteExistingEntityType);
        deleteRemovedAttributesInBackend(attrsMap, existingAttrsMap, backend, concreteExistingEntityType);
    });
}

Example 12 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class EntityTypeRepositoryDecorator method add.

@Override
public Integer add(Stream<EntityType> entities) {
    AtomicInteger count = new AtomicInteger();
    entities.filter(entity -> {
        count.incrementAndGet();
        return true;
    }).forEach(this::addEntityType);
    return count.get();
}

Example 13 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class EntityUtilsTest method getTypedValueStringAttributeEntityManagerXref.

@Test
public void getTypedValueStringAttributeEntityManagerXref() {
    String valueStr = "0";
    Attribute attr = mock(Attribute.class);
    EntityType refEntityType = mock(EntityType.class);
    Attribute refIdAttr = mock(Attribute.class);
    when(refIdAttr.getDataType()).thenReturn(STRING);
    when(refEntityType.getIdAttribute()).thenReturn(refIdAttr);
    when(attr.getRefEntity()).thenReturn(refEntityType);
    when(attr.getDataType()).thenReturn(XREF);
    Entity entity = mock(Entity.class);
    EntityManager entityManager = mock(EntityManager.class);
    when(entityManager.getReference(refEntityType, valueStr)).thenReturn(entity);
    assertEquals(EntityUtils.getTypedValue(valueStr, attr, entityManager), entity);
}

Example 14 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class EntityUtilsTest method isEmptyNoAttributes.

@Test
public void isEmptyNoAttributes() {
    EntityType entityType = when(mock(EntityType.class).getId()).thenReturn("entity").getMock();
    when(entityType.getAtomicAttributes()).thenReturn(emptyList());
    assertTrue(EntityUtils.isEmpty(new DynamicEntity(entityType)));
}

Example 15 with EntityType

use of org.molgenis.data.meta.model.EntityType in project molgenis by molgenis.

the class EntityUtilsTest method isEmptyAttributeValuesNotNull.

@Test
public void isEmptyAttributeValuesNotNull() {
    EntityType entityType = when(mock(EntityType.class).getId()).thenReturn("entity").getMock();
    Attribute attr = when(mock(Attribute.class).getName()).thenReturn("attr").getMock();
    when(attr.getDataType()).thenReturn(STRING);
    when(entityType.getAtomicAttributes()).thenReturn(singletonList(attr));
    when(entityType.getAttribute("attr")).thenReturn(attr);
    assertFalse(EntityUtils.isEmpty(new DynamicEntity(entityType, of("attr", "val"))));
}