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Example 1 with AnnotationQcCommand

use of org.monarchinitiative.loinc2hpocli.command.AnnotationQcCommand in project loinc2hpo by monarch-initiative.

the class Main method main.

public static void main(String[] args) {
    if (args.length == 0) {
        // if the user doesn't pass any command or option, add -h to show help
        args = new String[] { "-h" };
    }
    CommandLine cline = new CommandLine(new Main()).addSubcommand("annotation-qc", new AnnotationQcCommand()).addSubcommand("stats", new LoincTableCoreStatsCommand());
    cline.setToggleBooleanFlags(false);
    int exitCode = cline.execute(args);
    System.exit(exitCode);
}
Also used : CommandLine(picocli.CommandLine) LoincTableCoreStatsCommand(org.monarchinitiative.loinc2hpocli.command.LoincTableCoreStatsCommand) AnnotationQcCommand(org.monarchinitiative.loinc2hpocli.command.AnnotationQcCommand)

Aggregations

AnnotationQcCommand (org.monarchinitiative.loinc2hpocli.command.AnnotationQcCommand)1 LoincTableCoreStatsCommand (org.monarchinitiative.loinc2hpocli.command.LoincTableCoreStatsCommand)1 CommandLine (picocli.CommandLine)1