Search in sources :

Example 1 with Mets

use of org.mycore.mets.model.Mets in project mycore by MyCoRe-Org.

the class MCRMetsMods2IIIFConverter method convert.

public MCRIIIFManifest convert() {
    MCRIIIFManifest manifest = new MCRIIIFManifest();
    // root chapter ^= manifest metadata
    LogicalStructMap logicalStructMap = (LogicalStructMap) mets.getStructMap("LOGICAL");
    LogicalDiv divContainer = logicalStructMap.getDivContainer();
    List<MCRIIIFMetadata> metadata = extractMedataFromLogicalDiv(mets, divContainer);
    manifest.metadata = metadata;
    manifest.setId(this.identifier);
    PhysicalStructMap physicalStructMap = (PhysicalStructMap) mets.getStructMap("PHYSICAL");
    PhysicalDiv physicalDivContainer = physicalStructMap.getDivContainer();
    String id = physicalDivContainer.getId();
    MCRIIIFSequence sequence = new MCRIIIFSequence(id);
    List<PhysicalSubDiv> children = physicalDivContainer.getChildren();
    MCRIIIFImageImpl imageImpl = MCRIIIFImageImpl.getInstance(getImageImplName());
    MCRIIIFImageProfile profile = imageImpl.getProfile();
    profile.setId(MCRIIIFImageUtil.getProfileLink(imageImpl));
    sequence.canvases = children.stream().map(physicalSubDiv -> {
        String order = physicalSubDiv.asElement().getAttributeValue("ORDER");
        String orderLabel = physicalSubDiv.getOrderLabel();
        String contentids = physicalSubDiv.getContentids();
        String label = Stream.of(order, orderLabel, contentids).filter(o -> o != null && !o.isEmpty()).collect(Collectors.joining(" - "));
        String identifier = this.physicalIdentifierMap.get(physicalSubDiv);
        try {
            MCRIIIFImageInformation information = imageImpl.getInformation(identifier);
            MCRIIIFCanvas canvas = new MCRIIIFCanvas(identifier, label, information.width, information.height);
            MCRIIIFAnnotation annotation = new MCRIIIFAnnotation(identifier, canvas);
            canvas.images.add(annotation);
            MCRIIIFResource resource = new MCRIIIFResource(information.getId(), MCRDCMIType.Image);
            resource.setWidth(information.width);
            resource.setHeight(information.height);
            MCRIIIFService service = new MCRIIIFService(information.getId(), profile.getContext());
            service.profile = MCRIIIFImageProfile.IIIF_PROFILE_2_0;
            resource.setService(service);
            annotation.setResource(resource);
            return canvas;
        } catch (MCRIIIFImageNotFoundException | MCRIIIFImageProvidingException e) {
            throw new MCRException("Error while providing ImageInfo for " + identifier, e);
        } catch (MCRAccessException e) {
            LOGGER.warn("User has no access to {}", identifier);
            return null;
        }
    }).filter(Objects::nonNull).collect(Collectors.toList());
    manifest.sequences.add(sequence);
    List<MCRIIIFRange> complete = new ArrayList<>();
    processDivContainer(complete, divContainer);
    manifest.structures.addAll(complete);
    manifest.setLabel(metadata.stream().filter(m -> m.getLabel().equals("title")).findFirst().get().getStringValue().get());
    return manifest;
}
Also used : PhysicalDiv(org.mycore.mets.model.struct.PhysicalDiv) MCRIIIFCanvas(org.mycore.iiif.presentation.model.basic.MCRIIIFCanvas) MCRIIIFImageUtil(org.mycore.iiif.image.MCRIIIFImageUtil) MCRIIIFImageImpl(org.mycore.iiif.image.impl.MCRIIIFImageImpl) MCRConstants(org.mycore.common.MCRConstants) MCRIIIFImageProvidingException(org.mycore.iiif.image.impl.MCRIIIFImageProvidingException) MCRIIIFImageProfile(org.mycore.iiif.image.model.MCRIIIFImageProfile) HashMap(java.util.HashMap) MCRIIIFSequence(org.mycore.iiif.presentation.model.basic.MCRIIIFSequence) MCRException(org.mycore.common.MCRException) ArrayList(java.util.ArrayList) Document(org.jdom2.Document) MCRIIIFService(org.mycore.iiif.presentation.model.attributes.MCRIIIFService) FileGrp(org.mycore.mets.model.files.FileGrp) Map(java.util.Map) MCRDCMIType(org.mycore.iiif.presentation.model.attributes.MCRDCMIType) MCRIIIFResource(org.mycore.iiif.presentation.model.attributes.MCRIIIFResource) MCRAccessException(org.mycore.access.MCRAccessException) File(org.mycore.mets.model.files.File) PhysicalStructMap(org.mycore.mets.model.struct.PhysicalStructMap) MCRIIIFAnnotation(org.mycore.iiif.presentation.model.additional.MCRIIIFAnnotation) MCRIIIFViewingHint(org.mycore.iiif.presentation.model.attributes.MCRIIIFViewingHint) ConcurrentHashMap(java.util.concurrent.ConcurrentHashMap) MCRIIIFManifest(org.mycore.iiif.presentation.model.basic.MCRIIIFManifest) Mets(org.mycore.mets.model.Mets) Collectors(java.util.stream.Collectors) MCRIIIFRange(org.mycore.iiif.presentation.model.basic.MCRIIIFRange) LogicalDiv(org.mycore.mets.model.struct.LogicalDiv) MDTYPE(org.mycore.mets.model.struct.MDTYPE) PhysicalSubDiv(org.mycore.mets.model.struct.PhysicalSubDiv) Objects(java.util.Objects) List(java.util.List) Stream(java.util.stream.Stream) Logger(org.apache.logging.log4j.Logger) MCRIIIFImageNotFoundException(org.mycore.iiif.image.impl.MCRIIIFImageNotFoundException) MCRIIIFImageInformation(org.mycore.iiif.image.model.MCRIIIFImageInformation) LogicalStructMap(org.mycore.mets.model.struct.LogicalStructMap) DmdSec(org.mycore.mets.model.sections.DmdSec) MdWrap(org.mycore.mets.model.struct.MdWrap) Collections(java.util.Collections) LogManager(org.apache.logging.log4j.LogManager) MCRIIIFMetadata(org.mycore.iiif.presentation.model.attributes.MCRIIIFMetadata) PhysicalStructMap(org.mycore.mets.model.struct.PhysicalStructMap) ArrayList(java.util.ArrayList) MCRIIIFSequence(org.mycore.iiif.presentation.model.basic.MCRIIIFSequence) PhysicalSubDiv(org.mycore.mets.model.struct.PhysicalSubDiv) MCRIIIFRange(org.mycore.iiif.presentation.model.basic.MCRIIIFRange) LogicalStructMap(org.mycore.mets.model.struct.LogicalStructMap) LogicalDiv(org.mycore.mets.model.struct.LogicalDiv) MCRIIIFCanvas(org.mycore.iiif.presentation.model.basic.MCRIIIFCanvas) MCRIIIFMetadata(org.mycore.iiif.presentation.model.attributes.MCRIIIFMetadata) MCRIIIFService(org.mycore.iiif.presentation.model.attributes.MCRIIIFService) MCRIIIFImageImpl(org.mycore.iiif.image.impl.MCRIIIFImageImpl) MCRException(org.mycore.common.MCRException) MCRIIIFManifest(org.mycore.iiif.presentation.model.basic.MCRIIIFManifest) MCRIIIFImageInformation(org.mycore.iiif.image.model.MCRIIIFImageInformation) MCRIIIFResource(org.mycore.iiif.presentation.model.attributes.MCRIIIFResource) MCRAccessException(org.mycore.access.MCRAccessException) PhysicalDiv(org.mycore.mets.model.struct.PhysicalDiv) MCRIIIFImageProfile(org.mycore.iiif.image.model.MCRIIIFImageProfile) MCRIIIFAnnotation(org.mycore.iiif.presentation.model.additional.MCRIIIFAnnotation) Objects(java.util.Objects)

Example 2 with Mets

use of org.mycore.mets.model.Mets in project mycore by MyCoRe-Org.

the class MCRMetsSave method updateOnFileDelete.

/**
 * @param mets
 * @param file
 * @return
 */
private static Document updateOnFileDelete(Document mets, MCRPath file) {
    Mets modifiedMets;
    try {
        modifiedMets = new Mets(mets);
        String href = file.getOwnerRelativePath().substring(1);
        PhysicalStructMap physStructMap = (PhysicalStructMap) modifiedMets.getStructMap(PhysicalStructMap.TYPE);
        PhysicalDiv divContainer = physStructMap.getDivContainer();
        // search the right group and remove the file from the group
        List<FileGrp> fileGroups = modifiedMets.getFileSec().getFileGroups();
        for (FileGrp fileGrp : fileGroups) {
            if (fileGrp.contains(href)) {
                org.mycore.mets.model.files.File fileToRemove = fileGrp.getFileByHref(href);
                fileGrp.removeFile(fileToRemove);
                ArrayList<PhysicalSubDiv> physicalSubDivsToRemove = new ArrayList<>();
                // remove file from mets:mets/mets:structMap[@TYPE='PHYSICAL']
                for (PhysicalSubDiv physicalSubDiv : divContainer.getChildren()) {
                    ArrayList<Fptr> fptrsToRemove = new ArrayList<>();
                    for (Fptr fptr : physicalSubDiv.getChildren()) {
                        if (fptr.getFileId().equals(fileToRemove.getId())) {
                            if (fileGrp.getUse().equals(FileGrp.USE_MASTER)) {
                                physicalSubDivsToRemove.add(physicalSubDiv);
                            } else {
                                fptrsToRemove.add(fptr);
                            }
                        }
                    }
                    for (Fptr fptrToRemove : fptrsToRemove) {
                        LOGGER.warn(String.format(Locale.ROOT, "remove fptr \"%s\" from mets.xml of \"%s\"", fptrToRemove.getFileId(), file.getOwner()));
                        physicalSubDiv.remove(fptrToRemove);
                    }
                }
                for (PhysicalSubDiv physicalSubDivToRemove : physicalSubDivsToRemove) {
                    // remove links in mets:structLink section
                    List<SmLink> list = modifiedMets.getStructLink().getSmLinkByTo(physicalSubDivToRemove.getId());
                    LogicalStructMap logicalStructMap = (LogicalStructMap) modifiedMets.getStructMap(LogicalStructMap.TYPE);
                    for (SmLink linkToRemove : list) {
                        LOGGER.warn(String.format(Locale.ROOT, "remove smLink from \"%s\" to \"%s\"", linkToRemove.getFrom(), linkToRemove.getTo()));
                        modifiedMets.getStructLink().removeSmLink(linkToRemove);
                        // modify logical struct Map
                        String logID = linkToRemove.getFrom();
                        // the deleted file was not directly assigned to a structure
                        if (logicalStructMap.getDivContainer().getId().equals(logID)) {
                            continue;
                        }
                        LogicalDiv logicalDiv = logicalStructMap.getDivContainer().getLogicalSubDiv(logID);
                        if (logicalDiv == null) {
                            LOGGER.error("Could not find {} with id {}", LogicalDiv.class.getSimpleName(), logID);
                            LOGGER.error("Mets document remains unchanged");
                            return mets;
                        }
                        // there are still files for this logical sub div, nothing to do
                        if (modifiedMets.getStructLink().getSmLinkByFrom(logicalDiv.getId()).size() > 0) {
                            continue;
                        }
                        // the logical div has other divs included, nothing to do
                        if (logicalDiv.getChildren().size() > 0) {
                            continue;
                        }
                        /*
                             * the log div might be in a hierarchy of divs, which may now be empty
                             * (only containing empty directories), if so the parent of the log div
                             * must be deleted
                             * */
                        handleParents(logicalDiv, modifiedMets);
                        logicalStructMap.getDivContainer().remove(logicalDiv);
                    }
                    divContainer.remove(physicalSubDivToRemove);
                }
            }
        }
    } catch (Exception ex) {
        LOGGER.error("Error occured while removing file {} from the existing mets file", file, ex);
        return null;
    }
    return modifiedMets.asDocument();
}
Also used : PhysicalStructMap(org.mycore.mets.model.struct.PhysicalStructMap) FileGrp(org.mycore.mets.model.files.FileGrp) ArrayList(java.util.ArrayList) Fptr(org.mycore.mets.model.struct.Fptr) PhysicalDiv(org.mycore.mets.model.struct.PhysicalDiv) URISyntaxException(java.net.URISyntaxException) JDOMException(org.jdom2.JDOMException) MCRPersistenceException(org.mycore.common.MCRPersistenceException) SAXException(org.xml.sax.SAXException) UnsupportedEncodingException(java.io.UnsupportedEncodingException) IOException(java.io.IOException) PhysicalSubDiv(org.mycore.mets.model.struct.PhysicalSubDiv) LogicalStructMap(org.mycore.mets.model.struct.LogicalStructMap) LogicalDiv(org.mycore.mets.model.struct.LogicalDiv) SmLink(org.mycore.mets.model.struct.SmLink) Mets(org.mycore.mets.model.Mets) File(org.mycore.mets.model.files.File)

Example 3 with Mets

use of org.mycore.mets.model.Mets in project mycore by MyCoRe-Org.

the class MCRMetsSave method updateOnImageFile.

private static void updateOnImageFile(Document mets, String fileId, String path) {
    LOGGER.debug("FILE is a image!");
    // check if custom files are present and save the ids
    String[] customFileGroups = { MCRMetsFileUse.TRANSCRIPTION.toString(), MCRMetsFileUse.ALTO.toString(), MCRMetsFileUse.TRANSLATION.toString() };
    // add to structMap physical
    PhysicalSubDiv div = new PhysicalSubDiv(PhysicalSubDiv.ID_PREFIX + fileId, PhysicalSubDiv.TYPE_PAGE);
    div.add(new Fptr(fileId));
    Arrays.stream(customFileGroups).map(customFileGroup -> searchFileInGroup(mets, path, customFileGroup)).filter(Objects::nonNull).map(Fptr::new).forEach(div::add);
    // actually alter the mets document
    Element structMapPhys = getPhysicalStructmap(mets);
    structMapPhys.addContent(div.asElement());
    // add to structLink
    SmLink smLink = getDefaultSmLink(mets, div);
    Element structLink = getStructLink(mets);
    structLink.addContent(smLink.asElement());
}
Also used : Arrays(java.util.Arrays) URLDecoder(java.net.URLDecoder) StructLink(org.mycore.mets.model.struct.StructLink) URISyntaxException(java.net.URISyntaxException) LOCTYPE(org.mycore.mets.model.struct.LOCTYPE) MCRMarkManager(org.mycore.datamodel.common.MCRMarkManager) MCRDerivate(org.mycore.datamodel.metadata.MCRDerivate) Document(org.jdom2.Document) JDOMException(org.jdom2.JDOMException) Locale(java.util.Locale) FileGrp(org.mycore.mets.model.files.FileGrp) Map(java.util.Map) MCRMetsFileUse(org.mycore.mets.model.simple.MCRMetsFileUse) File(org.mycore.mets.model.files.File) Path(java.nio.file.Path) SimpleFileVisitor(java.nio.file.SimpleFileVisitor) PhysicalStructMap(org.mycore.mets.model.struct.PhysicalStructMap) Format(org.jdom2.output.Format) MCRPath(org.mycore.datamodel.niofs.MCRPath) Collection(java.util.Collection) MCRPersistenceException(org.mycore.common.MCRPersistenceException) Set(java.util.Set) Mets(org.mycore.mets.model.Mets) Collectors(java.util.stream.Collectors) LogicalDiv(org.mycore.mets.model.struct.LogicalDiv) XPathExpression(org.jdom2.xpath.XPathExpression) SmLink(org.mycore.mets.model.struct.SmLink) Objects(java.util.Objects) FileVisitResult(java.nio.file.FileVisitResult) List(java.util.List) Logger(org.apache.logging.log4j.Logger) MCRObjectID(org.mycore.datamodel.metadata.MCRObjectID) LogicalStructMap(org.mycore.mets.model.struct.LogicalStructMap) SAXException(org.xml.sax.SAXException) MCRStreamUtils(org.mycore.common.MCRStreamUtils) MCRPathContent(org.mycore.common.content.MCRPathContent) UnsupportedEncodingException(java.io.UnsupportedEncodingException) Element(org.jdom2.Element) PhysicalDiv(org.mycore.mets.model.struct.PhysicalDiv) XPathFactory(org.jdom2.xpath.XPathFactory) MCRConstants(org.mycore.common.MCRConstants) AtomicBoolean(java.util.concurrent.atomic.AtomicBoolean) HashMap(java.util.HashMap) MCRConfiguration(org.mycore.common.config.MCRConfiguration) MessageFormat(java.text.MessageFormat) ArrayList(java.util.ArrayList) HashSet(java.util.HashSet) MCRXMLFunctions(org.mycore.common.xml.MCRXMLFunctions) MCRDirectory(org.mycore.datamodel.ifs2.MCRDirectory) OutputStream(java.io.OutputStream) MCRContentTypes(org.mycore.datamodel.niofs.MCRContentTypes) Files(java.nio.file.Files) IOException(java.io.IOException) BasicFileAttributes(java.nio.file.attribute.BasicFileAttributes) PhysicalSubDiv(org.mycore.mets.model.struct.PhysicalSubDiv) XMLOutputter(org.jdom2.output.XMLOutputter) Attribute(org.jdom2.Attribute) Fptr(org.mycore.mets.model.struct.Fptr) Paths(java.nio.file.Paths) FLocat(org.mycore.mets.model.files.FLocat) Collections(java.util.Collections) LogManager(org.apache.logging.log4j.LogManager) Filters(org.jdom2.filter.Filters) SmLink(org.mycore.mets.model.struct.SmLink) Element(org.jdom2.Element) Objects(java.util.Objects) Fptr(org.mycore.mets.model.struct.Fptr) PhysicalSubDiv(org.mycore.mets.model.struct.PhysicalSubDiv)

Example 4 with Mets

use of org.mycore.mets.model.Mets in project mycore by MyCoRe-Org.

the class MCRDFGLinkServlet method getOrderNumber.

private static int getOrderNumber(Document metsDoc, String fileHref) {
    int orderNumber = -1;
    String fileID = null;
    try {
        Mets mets = new Mets(metsDoc);
        List<FileGrp> fileGroups = mets.getFileSec().getFileGroups();
        for (FileGrp fileGrp : fileGroups) {
            List<File> fileList = fileGrp.getFileList();
            for (File file : fileList) {
                FLocat fLocat = file.getFLocat();
                if (fLocat.getHref().equals(MCRXMLFunctions.encodeURIPath(fileHref)))
                    fileID = file.getId();
            }
        }
        if (fileID != null) {
            PhysicalStructMap structMap = (PhysicalStructMap) mets.getStructMap(PhysicalStructMap.TYPE);
            PhysicalDiv rootDiv = structMap.getDivContainer();
            List<PhysicalSubDiv> children = rootDiv.getChildren();
            for (int index = 0; index < children.size(); index++) {
                PhysicalSubDiv physicalSubDiv = children.get(index);
                List<Fptr> fptrList = physicalSubDiv.getChildren();
                for (Fptr fptr : fptrList) {
                    if (fptr.getFileId().equals(fileID))
                        orderNumber = index + 1;
                }
            }
        }
    } catch (Exception e) {
        throw new MCRPersistenceException("could not parse mets.xml", e);
    }
    return orderNumber;
}
Also used : PhysicalStructMap(org.mycore.mets.model.struct.PhysicalStructMap) FileGrp(org.mycore.mets.model.files.FileGrp) Fptr(org.mycore.mets.model.struct.Fptr) PhysicalDiv(org.mycore.mets.model.struct.PhysicalDiv) MCRPersistenceException(org.mycore.common.MCRPersistenceException) PhysicalSubDiv(org.mycore.mets.model.struct.PhysicalSubDiv) Mets(org.mycore.mets.model.Mets) FLocat(org.mycore.mets.model.files.FLocat) File(org.mycore.mets.model.files.File) MCRPersistenceException(org.mycore.common.MCRPersistenceException)

Example 5 with Mets

use of org.mycore.mets.model.Mets in project mycore by MyCoRe-Org.

the class MCRXMLSimpleModelConverter method fromXML.

/**
 * Converts a Document to MetsSimpleModel
 *
 * @param metsDocument the Document which should be converted
 * @return the converted MetsSimpleModel
 * @throws Exception if new Mets(metsDocument) throws exception
 */
public static MCRMetsSimpleModel fromXML(Document metsDocument) throws Exception {
    Mets mets = new Mets(metsDocument);
    MCRMetsSimpleModel msm = new MCRMetsSimpleModel();
    Map<String, MCRMetsPage> idPageMap = new Hashtable<>();
    Map<String, MCRMetsFile> idFileMap = buildidFileMap(mets);
    List<MCRMetsPage> metsPageList = buildPageList(mets, idPageMap, idFileMap);
    msm.getMetsPageList().addAll(metsPageList);
    Map<String, MCRMetsSection> idSectionMap = new Hashtable<>();
    MCRMetsSection rootMetsSection = buidRootSection(mets, idSectionMap, idFileMap);
    msm.setRootSection(rootMetsSection);
    linkPages(mets, idSectionMap, idPageMap, msm);
    return msm;
}
Also used : Mets(org.mycore.mets.model.Mets) MCRMetsSimpleModel(org.mycore.mets.model.simple.MCRMetsSimpleModel) Hashtable(java.util.Hashtable) MCRMetsPage(org.mycore.mets.model.simple.MCRMetsPage) MCRMetsFile(org.mycore.mets.model.simple.MCRMetsFile) MCRMetsSection(org.mycore.mets.model.simple.MCRMetsSection)

Aggregations

Mets (org.mycore.mets.model.Mets)10 FileGrp (org.mycore.mets.model.files.FileGrp)8 PhysicalStructMap (org.mycore.mets.model.struct.PhysicalStructMap)8 PhysicalSubDiv (org.mycore.mets.model.struct.PhysicalSubDiv)8 Document (org.jdom2.Document)7 File (org.mycore.mets.model.files.File)7 LogicalDiv (org.mycore.mets.model.struct.LogicalDiv)7 LogicalStructMap (org.mycore.mets.model.struct.LogicalStructMap)7 PhysicalDiv (org.mycore.mets.model.struct.PhysicalDiv)7 ArrayList (java.util.ArrayList)6 List (java.util.List)6 Map (java.util.Map)6 Fptr (org.mycore.mets.model.struct.Fptr)5 Collections (java.util.Collections)4 HashMap (java.util.HashMap)4 Objects (java.util.Objects)4 Collectors (java.util.stream.Collectors)4 LogManager (org.apache.logging.log4j.LogManager)4 Logger (org.apache.logging.log4j.Logger)4 MCRConstants (org.mycore.common.MCRConstants)4