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Example 1 with PhysicalLogFile

use of org.neo4j.kernel.impl.transaction.log.PhysicalLogFile in project neo4j by neo4j.

the class RecoveryTest method recover.

private boolean recover(PhysicalLogFiles logFiles) {
    LifeSupport life = new LifeSupport();
    Recovery.Monitor monitor = mock(Recovery.Monitor.class);
    final AtomicBoolean recoveryRequired = new AtomicBoolean();
    try {
        StorageEngine storageEngine = mock(StorageEngine.class);
        final LogEntryReader<ReadableClosablePositionAwareChannel> reader = new VersionAwareLogEntryReader<>();
        LatestCheckPointFinder finder = new LatestCheckPointFinder(logFiles, fileSystemRule.get(), reader);
        TransactionMetadataCache metadataCache = new TransactionMetadataCache(100);
        LogHeaderCache logHeaderCache = new LogHeaderCache(10);
        LogFile logFile = life.add(new PhysicalLogFile(fileSystemRule.get(), logFiles, 50, () -> transactionIdStore.getLastCommittedTransactionId(), logVersionRepository, mock(PhysicalLogFile.Monitor.class), logHeaderCache));
        LogicalTransactionStore txStore = new PhysicalLogicalTransactionStore(logFile, metadataCache, reader);
        life.add(new Recovery(new DefaultRecoverySPI(storageEngine, logFiles, fileSystemRule.get(), logVersionRepository, finder, transactionIdStore, txStore, NO_MONITOR) {

            @Override
            public Visitor<CommittedTransactionRepresentation, Exception> startRecovery() {
                recoveryRequired.set(true);
                return super.startRecovery();
            }
        }, monitor));
        life.start();
    } finally {
        life.shutdown();
    }
    return recoveryRequired.get();
}
Also used : PhysicalLogicalTransactionStore(org.neo4j.kernel.impl.transaction.log.PhysicalLogicalTransactionStore) LatestCheckPointFinder(org.neo4j.kernel.recovery.LatestCheckPointFinder) DefaultRecoverySPI(org.neo4j.kernel.recovery.DefaultRecoverySPI) CommittedTransactionRepresentation(org.neo4j.kernel.impl.transaction.CommittedTransactionRepresentation) TransactionMetadataCache(org.neo4j.kernel.impl.transaction.log.TransactionMetadataCache) PhysicalLogicalTransactionStore(org.neo4j.kernel.impl.transaction.log.PhysicalLogicalTransactionStore) LogicalTransactionStore(org.neo4j.kernel.impl.transaction.log.LogicalTransactionStore) StorageEngine(org.neo4j.storageengine.api.StorageEngine) Recovery(org.neo4j.kernel.recovery.Recovery) IOException(java.io.IOException) ReadableClosablePositionAwareChannel(org.neo4j.kernel.impl.transaction.log.ReadableClosablePositionAwareChannel) LogFile(org.neo4j.kernel.impl.transaction.log.LogFile) PhysicalLogFile(org.neo4j.kernel.impl.transaction.log.PhysicalLogFile) AtomicBoolean(java.util.concurrent.atomic.AtomicBoolean) LifeSupport(org.neo4j.kernel.lifecycle.LifeSupport) VersionAwareLogEntryReader(org.neo4j.kernel.impl.transaction.log.entry.VersionAwareLogEntryReader) LogHeaderCache(org.neo4j.kernel.impl.transaction.log.LogHeaderCache) PhysicalLogFile(org.neo4j.kernel.impl.transaction.log.PhysicalLogFile)

Example 2 with PhysicalLogFile

use of org.neo4j.kernel.impl.transaction.log.PhysicalLogFile in project neo4j by neo4j.

the class RecoveryTest method shouldSeeThatACleanDatabaseShouldNotRequireRecovery.

@Test
public void shouldSeeThatACleanDatabaseShouldNotRequireRecovery() throws Exception {
    final PhysicalLogFiles logFiles = new PhysicalLogFiles(directory.directory(), "log", fileSystemRule.get());
    File file = logFiles.getLogFileForVersion(logVersion);
    writeSomeData(file, new Visitor<Pair<LogEntryWriter, Consumer<LogPositionMarker>>, IOException>() {

        @Override
        public boolean visit(Pair<LogEntryWriter, Consumer<LogPositionMarker>> pair) throws IOException {
            LogEntryWriter writer = pair.first();
            Consumer<LogPositionMarker> consumer = pair.other();
            LogPositionMarker marker = new LogPositionMarker();
            // last committed tx
            consumer.accept(marker);
            writer.writeStartEntry(0, 1, 2L, 3L, new byte[0]);
            writer.writeCommitEntry(4L, 5L);
            // check point
            consumer.accept(marker);
            writer.writeCheckPointEntry(marker.newPosition());
            return true;
        }
    });
    LifeSupport life = new LifeSupport();
    Recovery.Monitor monitor = mock(Recovery.Monitor.class);
    try {
        StorageEngine storageEngine = mock(StorageEngine.class);
        final LogEntryReader<ReadableClosablePositionAwareChannel> reader = new VersionAwareLogEntryReader<>();
        LatestCheckPointFinder finder = new LatestCheckPointFinder(logFiles, fileSystemRule.get(), reader);
        TransactionMetadataCache metadataCache = new TransactionMetadataCache(100);
        LogHeaderCache logHeaderCache = new LogHeaderCache(10);
        LogFile logFile = life.add(new PhysicalLogFile(fileSystemRule.get(), logFiles, 50, () -> transactionIdStore.getLastCommittedTransactionId(), logVersionRepository, mock(PhysicalLogFile.Monitor.class), logHeaderCache));
        LogicalTransactionStore txStore = new PhysicalLogicalTransactionStore(logFile, metadataCache, reader);
        life.add(new Recovery(new DefaultRecoverySPI(storageEngine, logFiles, fileSystemRule.get(), logVersionRepository, finder, transactionIdStore, txStore, NO_MONITOR) {

            @Override
            public Visitor<CommittedTransactionRepresentation, Exception> startRecovery() {
                fail("Recovery should not be required");
                // <-- to satisfy the compiler
                return null;
            }
        }, monitor));
        life.start();
        verifyZeroInteractions(monitor);
    } finally {
        life.shutdown();
    }
}
Also used : DefaultRecoverySPI(org.neo4j.kernel.recovery.DefaultRecoverySPI) PhysicalLogicalTransactionStore(org.neo4j.kernel.impl.transaction.log.PhysicalLogicalTransactionStore) LogicalTransactionStore(org.neo4j.kernel.impl.transaction.log.LogicalTransactionStore) StorageEngine(org.neo4j.storageengine.api.StorageEngine) Recovery(org.neo4j.kernel.recovery.Recovery) PhysicalLogFiles(org.neo4j.kernel.impl.transaction.log.PhysicalLogFiles) LogPositionMarker(org.neo4j.kernel.impl.transaction.log.LogPositionMarker) ReadableClosablePositionAwareChannel(org.neo4j.kernel.impl.transaction.log.ReadableClosablePositionAwareChannel) LogFile(org.neo4j.kernel.impl.transaction.log.LogFile) PhysicalLogFile(org.neo4j.kernel.impl.transaction.log.PhysicalLogFile) Consumer(java.util.function.Consumer) LifeSupport(org.neo4j.kernel.lifecycle.LifeSupport) VersionAwareLogEntryReader(org.neo4j.kernel.impl.transaction.log.entry.VersionAwareLogEntryReader) LogEntryWriter(org.neo4j.kernel.impl.transaction.log.entry.LogEntryWriter) Pair(org.neo4j.helpers.collection.Pair) PhysicalLogicalTransactionStore(org.neo4j.kernel.impl.transaction.log.PhysicalLogicalTransactionStore) LatestCheckPointFinder(org.neo4j.kernel.recovery.LatestCheckPointFinder) CommittedTransactionRepresentation(org.neo4j.kernel.impl.transaction.CommittedTransactionRepresentation) TransactionMetadataCache(org.neo4j.kernel.impl.transaction.log.TransactionMetadataCache) IOException(java.io.IOException) IOException(java.io.IOException) LogFile(org.neo4j.kernel.impl.transaction.log.LogFile) PhysicalLogFile(org.neo4j.kernel.impl.transaction.log.PhysicalLogFile) File(java.io.File) LogHeaderCache(org.neo4j.kernel.impl.transaction.log.LogHeaderCache) PhysicalLogFile(org.neo4j.kernel.impl.transaction.log.PhysicalLogFile) Test(org.junit.Test)

Example 3 with PhysicalLogFile

use of org.neo4j.kernel.impl.transaction.log.PhysicalLogFile in project neo4j by neo4j.

the class IndexCreationTest method verifyThatIndexCreationTransactionIsTheFirstOne.

private void verifyThatIndexCreationTransactionIsTheFirstOne() throws Exception {
    PhysicalLogFile pLogFile = db.getDependencyResolver().resolveDependency(PhysicalLogFile.class);
    long version = db.getDependencyResolver().resolveDependency(LogVersionRepository.class).getCurrentLogVersion();
    db.getDependencyResolver().resolveDependency(LogRotation.class).rotateLogFile();
    db.getDependencyResolver().resolveDependency(CheckPointer.class).forceCheckPoint(new SimpleTriggerInfo("test"));
    ReadableLogChannel logChannel = pLogFile.getReader(LogPosition.start(version));
    final AtomicBoolean success = new AtomicBoolean(false);
    try (IOCursor<LogEntry> cursor = new LogEntryCursor(new VersionAwareLogEntryReader<>(), logChannel)) {
        List<StorageCommand> commandsInFirstEntry = new ArrayList<>();
        boolean startFound = false;
        while (cursor.next()) {
            LogEntry entry = cursor.get();
            if (entry instanceof LogEntryStart) {
                if (startFound) {
                    throw new IllegalArgumentException("More than one start entry");
                }
                startFound = true;
            }
            if (startFound && entry instanceof LogEntryCommand) {
                commandsInFirstEntry.add(entry.<LogEntryCommand>as().getXaCommand());
            }
            if (entry instanceof LogEntryCommit) {
                // The first COMMIT
                assertTrue(startFound);
                assertFalse("Index creation transaction wasn't the first one", commandsInFirstEntry.isEmpty());
                List<StorageCommand> createCommands = Iterators.asList(new FilteringIterator<>(commandsInFirstEntry.iterator(), item -> item instanceof IndexDefineCommand));
                assertEquals(1, createCommands.size());
                success.set(true);
                break;
            }
        }
    }
    assertTrue("Didn't find any commit record in log " + version, success.get());
}
Also used : LogEntryStart(org.neo4j.kernel.impl.transaction.log.entry.LogEntryStart) LogEntryCursor(org.neo4j.kernel.impl.transaction.log.LogEntryCursor) CheckPointer(org.neo4j.kernel.impl.transaction.log.checkpoint.CheckPointer) Iterators(org.neo4j.helpers.collection.Iterators) AtomicBoolean(java.util.concurrent.atomic.AtomicBoolean) IOCursor(org.neo4j.cursor.IOCursor) Node(org.neo4j.graphdb.Node) VersionAwareLogEntryReader(org.neo4j.kernel.impl.transaction.log.entry.VersionAwareLogEntryReader) TestGraphDatabaseFactory(org.neo4j.test.TestGraphDatabaseFactory) ArrayList(java.util.ArrayList) StorageCommand(org.neo4j.storageengine.api.StorageCommand) LogPosition(org.neo4j.kernel.impl.transaction.log.LogPosition) LogRotation(org.neo4j.kernel.impl.transaction.log.rotation.LogRotation) After(org.junit.After) Transaction(org.neo4j.graphdb.Transaction) ReadableLogChannel(org.neo4j.kernel.impl.transaction.log.ReadableLogChannel) ExecutorService(java.util.concurrent.ExecutorService) Before(org.junit.Before) LogEntryCommit(org.neo4j.kernel.impl.transaction.log.entry.LogEntryCommit) IndexDefineCommand(org.neo4j.kernel.impl.index.IndexDefineCommand) LogVersionRepository(org.neo4j.kernel.impl.transaction.log.LogVersionRepository) TestDirectory(org.neo4j.test.rule.TestDirectory) Assert.assertTrue(org.junit.Assert.assertTrue) Test(org.junit.Test) LogEntryStart(org.neo4j.kernel.impl.transaction.log.entry.LogEntryStart) PhysicalLogFile(org.neo4j.kernel.impl.transaction.log.PhysicalLogFile) SimpleTriggerInfo(org.neo4j.kernel.impl.transaction.log.checkpoint.SimpleTriggerInfo) GraphDatabaseAPI(org.neo4j.kernel.internal.GraphDatabaseAPI) TimeUnit(java.util.concurrent.TimeUnit) CountDownLatch(java.util.concurrent.CountDownLatch) List(java.util.List) Rule(org.junit.Rule) LogEntryCommand(org.neo4j.kernel.impl.transaction.log.entry.LogEntryCommand) Executors.newCachedThreadPool(java.util.concurrent.Executors.newCachedThreadPool) Assert.assertFalse(org.junit.Assert.assertFalse) FilteringIterator(org.neo4j.helpers.collection.FilteringIterator) LogEntry(org.neo4j.kernel.impl.transaction.log.entry.LogEntry) Assert.assertEquals(org.junit.Assert.assertEquals) Index(org.neo4j.graphdb.index.Index) ReadableLogChannel(org.neo4j.kernel.impl.transaction.log.ReadableLogChannel) LogEntryCommand(org.neo4j.kernel.impl.transaction.log.entry.LogEntryCommand) IndexDefineCommand(org.neo4j.kernel.impl.index.IndexDefineCommand) StorageCommand(org.neo4j.storageengine.api.StorageCommand) ArrayList(java.util.ArrayList) LogVersionRepository(org.neo4j.kernel.impl.transaction.log.LogVersionRepository) LogEntryCursor(org.neo4j.kernel.impl.transaction.log.LogEntryCursor) AtomicBoolean(java.util.concurrent.atomic.AtomicBoolean) SimpleTriggerInfo(org.neo4j.kernel.impl.transaction.log.checkpoint.SimpleTriggerInfo) LogEntryCommit(org.neo4j.kernel.impl.transaction.log.entry.LogEntryCommit) CheckPointer(org.neo4j.kernel.impl.transaction.log.checkpoint.CheckPointer) LogRotation(org.neo4j.kernel.impl.transaction.log.rotation.LogRotation) PhysicalLogFile(org.neo4j.kernel.impl.transaction.log.PhysicalLogFile) LogEntry(org.neo4j.kernel.impl.transaction.log.entry.LogEntry)

Example 4 with PhysicalLogFile

use of org.neo4j.kernel.impl.transaction.log.PhysicalLogFile in project neo4j by neo4j.

the class TransactionLogRecoveryIT method writePartialTx.

private void writePartialTx(File storeDir) throws IOException {
    PhysicalLogFiles logFiles = new PhysicalLogFiles(storeDir, fs);
    ReadOnlyLogVersionRepository logVersionRepository = new ReadOnlyLogVersionRepository(pageCache.getPageCache(fs), storeDir);
    ReadOnlyTransactionIdStore txIdStore = new ReadOnlyTransactionIdStore(pageCache.getPageCache(fs), storeDir);
    PhysicalLogFile logFile = new PhysicalLogFile(fs, logFiles, Long.MAX_VALUE, /*don't rotate*/
    txIdStore::getLastCommittedTransactionId, logVersionRepository, new Monitors().newMonitor(PhysicalLogFile.Monitor.class), new LogHeaderCache(10));
    try (Lifespan ignored = new Lifespan(logFile)) {
        LogEntryWriter writer = new LogEntryWriter(logFile.getWriter());
        writer.writeStartEntry(0, 0, 0x123456789ABCDEFL, txIdStore.getLastCommittedTransactionId() + 1, new byte[] { 0 });
    }
}
Also used : ReadOnlyTransactionIdStore(org.neo4j.kernel.impl.transaction.log.ReadOnlyTransactionIdStore) Monitors(org.neo4j.kernel.monitoring.Monitors) LogEntryWriter(org.neo4j.kernel.impl.transaction.log.entry.LogEntryWriter) ReadOnlyLogVersionRepository(org.neo4j.kernel.impl.transaction.log.ReadOnlyLogVersionRepository) LogHeaderCache(org.neo4j.kernel.impl.transaction.log.LogHeaderCache) Lifespan(org.neo4j.kernel.lifecycle.Lifespan) PhysicalLogFile(org.neo4j.kernel.impl.transaction.log.PhysicalLogFile) PhysicalLogFiles(org.neo4j.kernel.impl.transaction.log.PhysicalLogFiles)

Example 5 with PhysicalLogFile

use of org.neo4j.kernel.impl.transaction.log.PhysicalLogFile in project neo4j by neo4j.

the class NeoStoreDataSource method buildTransactionLogs.

private NeoStoreTransactionLogModule buildTransactionLogs(File storeDir, Config config, LogProvider logProvider, JobScheduler scheduler, FileSystemAbstraction fileSystemAbstraction, StorageEngine storageEngine, LogEntryReader<ReadableClosablePositionAwareChannel> logEntryReader, SynchronizedArrayIdOrderingQueue legacyIndexTransactionOrdering, TransactionIdStore transactionIdStore, LogVersionRepository logVersionRepository) {
    TransactionMetadataCache transactionMetadataCache = new TransactionMetadataCache(100_000);
    LogHeaderCache logHeaderCache = new LogHeaderCache(1000);
    final PhysicalLogFiles logFiles = new PhysicalLogFiles(storeDir, PhysicalLogFile.DEFAULT_NAME, fileSystemAbstraction);
    final PhysicalLogFile logFile = life.add(new PhysicalLogFile(fileSystemAbstraction, logFiles, config.get(GraphDatabaseSettings.logical_log_rotation_threshold), transactionIdStore::getLastCommittedTransactionId, logVersionRepository, physicalLogMonitor, logHeaderCache));
    final PhysicalLogFileInformation.LogVersionToTimestamp logInformation = version -> {
        LogPosition position = LogPosition.start(version);
        try (ReadableLogChannel channel = logFile.getReader(position)) {
            LogEntry entry;
            while ((entry = logEntryReader.readLogEntry(channel)) != null) {
                if (entry instanceof LogEntryStart) {
                    return entry.<LogEntryStart>as().getTimeWritten();
                }
            }
        }
        return -1;
    };
    final LogFileInformation logFileInformation = new PhysicalLogFileInformation(logFiles, logHeaderCache, transactionIdStore::getLastCommittedTransactionId, logInformation);
    if (config.get(GraphDatabaseFacadeFactory.Configuration.ephemeral)) {
        config = config.withDefaults(stringMap(GraphDatabaseSettings.keep_logical_logs.name(), "1 files"));
    }
    String pruningConf = config.get(GraphDatabaseSettings.keep_logical_logs);
    LogPruneStrategy logPruneStrategy = fromConfigValue(fs, logFileInformation, logFiles, pruningConf);
    final LogPruning logPruning = new LogPruningImpl(logPruneStrategy, logProvider);
    final LogRotation logRotation = new LogRotationImpl(monitors.newMonitor(LogRotation.Monitor.class), logFile, databaseHealth);
    final TransactionAppender appender = life.add(new BatchingTransactionAppender(logFile, logRotation, transactionMetadataCache, transactionIdStore, legacyIndexTransactionOrdering, databaseHealth));
    final LogicalTransactionStore logicalTransactionStore = new PhysicalLogicalTransactionStore(logFile, transactionMetadataCache, logEntryReader);
    int txThreshold = config.get(GraphDatabaseSettings.check_point_interval_tx);
    final CountCommittedTransactionThreshold countCommittedTransactionThreshold = new CountCommittedTransactionThreshold(txThreshold);
    long timeMillisThreshold = config.get(GraphDatabaseSettings.check_point_interval_time);
    TimeCheckPointThreshold timeCheckPointThreshold = new TimeCheckPointThreshold(timeMillisThreshold, clock);
    CheckPointThreshold threshold = CheckPointThresholds.or(countCommittedTransactionThreshold, timeCheckPointThreshold);
    final CheckPointerImpl checkPointer = new CheckPointerImpl(transactionIdStore, threshold, storageEngine, logPruning, appender, databaseHealth, logProvider, tracers.checkPointTracer, ioLimiter, storeCopyCheckPointMutex);
    long recurringPeriod = Math.min(timeMillisThreshold, TimeUnit.SECONDS.toMillis(10));
    CheckPointScheduler checkPointScheduler = new CheckPointScheduler(checkPointer, scheduler, recurringPeriod, databaseHealth);
    life.add(checkPointer);
    life.add(checkPointScheduler);
    return new NeoStoreTransactionLogModule(logicalTransactionStore, logFileInformation, logFiles, logFile, logRotation, checkPointer, appender, legacyIndexTransactionOrdering);
}
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VisibleMigrationProgressMonitor(org.neo4j.kernel.impl.storemigration.monitoring.VisibleMigrationProgressMonitor) TimeUnit(java.util.concurrent.TimeUnit) DatabaseHealth(org.neo4j.kernel.internal.DatabaseHealth) CommitProcessFactory(org.neo4j.kernel.impl.api.CommitProcessFactory) Clock(java.time.Clock) FileSystemAbstraction(org.neo4j.io.fs.FileSystemAbstraction) TransactionHooks(org.neo4j.kernel.impl.api.TransactionHooks) LogPruneStrategy(org.neo4j.kernel.impl.transaction.log.pruning.LogPruneStrategy) CheckPointerImpl(org.neo4j.kernel.impl.transaction.log.checkpoint.CheckPointerImpl) TimeCheckPointThreshold(org.neo4j.kernel.impl.transaction.log.checkpoint.TimeCheckPointThreshold) BatchingTransactionAppender(org.neo4j.kernel.impl.transaction.log.BatchingTransactionAppender) PhysicalLogicalTransactionStore(org.neo4j.kernel.impl.transaction.log.PhysicalLogicalTransactionStore) LogicalTransactionStore(org.neo4j.kernel.impl.transaction.log.LogicalTransactionStore) 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Aggregations

PhysicalLogFile (org.neo4j.kernel.impl.transaction.log.PhysicalLogFile)10 LogHeaderCache (org.neo4j.kernel.impl.transaction.log.LogHeaderCache)8 PhysicalLogFiles (org.neo4j.kernel.impl.transaction.log.PhysicalLogFiles)8 File (java.io.File)6 IOException (java.io.IOException)6 LogEntryWriter (org.neo4j.kernel.impl.transaction.log.entry.LogEntryWriter)6 VersionAwareLogEntryReader (org.neo4j.kernel.impl.transaction.log.entry.VersionAwareLogEntryReader)6 LifeSupport (org.neo4j.kernel.lifecycle.LifeSupport)6 LogPosition (org.neo4j.kernel.impl.transaction.log.LogPosition)5 ReadableClosablePositionAwareChannel (org.neo4j.kernel.impl.transaction.log.ReadableClosablePositionAwareChannel)5 Test (org.junit.Test)4 LogFile (org.neo4j.kernel.impl.transaction.log.LogFile)4 LogicalTransactionStore (org.neo4j.kernel.impl.transaction.log.LogicalTransactionStore)4 PhysicalLogicalTransactionStore (org.neo4j.kernel.impl.transaction.log.PhysicalLogicalTransactionStore)4 AtomicBoolean (java.util.concurrent.atomic.AtomicBoolean)3 CommittedTransactionRepresentation (org.neo4j.kernel.impl.transaction.CommittedTransactionRepresentation)3 LogVersionRepository (org.neo4j.kernel.impl.transaction.log.LogVersionRepository)3 TransactionMetadataCache (org.neo4j.kernel.impl.transaction.log.TransactionMetadataCache)3 Monitors (org.neo4j.kernel.monitoring.Monitors)3 DefaultRecoverySPI (org.neo4j.kernel.recovery.DefaultRecoverySPI)3