Example 1 with Identifier
use of org.nextprot.api.core.domain.Identifier in project nextprot-api by calipho-sib.
the class IdentifierDaoImpl method findIdentifiersByMaster.
@Override
public List<Identifier> findIdentifiersByMaster(String uniqueName) {
Map<String, Object> params = new HashMap<>();
params.put("uniqueName", uniqueName);
List<Identifier> ids = new NamedParameterJdbcTemplate(dsLocator.getDataSource()).query(sqlDictionary.getSQLQuery("identifiers-by-master-unique-name"), params, new IdentifierRowMapper(uniqueName));
return ids.stream().filter(Objects::nonNull).filter(i -> isValidIdentifier(i)).collect(Collectors.toList());
}
Also used :
DbXref(org.nextprot.api.core.domain.DbXref)
ParameterizedRowMapper(org.springframework.jdbc.core.simple.ParameterizedRowMapper)
NamedParameterJdbcTemplate(org.springframework.jdbc.core.namedparam.NamedParameterJdbcTemplate)
Autowired(org.springframework.beans.factory.annotation.Autowired)
DbXrefURLResolverDelegate(org.nextprot.api.core.service.dbxref.resolver.DbXrefURLResolverDelegate)
HashMap(java.util.HashMap)
Identifier(org.nextprot.api.core.domain.Identifier)
Collectors(java.util.stream.Collectors)
Objects(java.util.Objects)
SQLException(java.sql.SQLException)
List(java.util.List)
SQLDictionary(org.nextprot.api.commons.utils.SQLDictionary)
ResultSet(java.sql.ResultSet)
IdentifierDao(org.nextprot.api.core.dao.IdentifierDao)
Map(java.util.Map)
DataSourceServiceLocator(org.nextprot.api.commons.spring.jdbc.DataSourceServiceLocator)
Repository(org.springframework.stereotype.Repository)
Identifier(org.nextprot.api.core.domain.Identifier)
HashMap(java.util.HashMap)
NamedParameterJdbcTemplate(org.springframework.jdbc.core.namedparam.NamedParameterJdbcTemplate)
Objects(java.util.Objects)
Aggregations
ResultSet (java.sql.ResultSet)1
SQLException (java.sql.SQLException)1
HashMap (java.util.HashMap)1
List (java.util.List)1
Map (java.util.Map)1
Objects (java.util.Objects)1
Collectors (java.util.stream.Collectors)1
DataSourceServiceLocator (org.nextprot.api.commons.spring.jdbc.DataSourceServiceLocator)1
SQLDictionary (org.nextprot.api.commons.utils.SQLDictionary)1
IdentifierDao (org.nextprot.api.core.dao.IdentifierDao)1
DbXref (org.nextprot.api.core.domain.DbXref)1
Identifier (org.nextprot.api.core.domain.Identifier)1
DbXrefURLResolverDelegate (org.nextprot.api.core.service.dbxref.resolver.DbXrefURLResolverDelegate)1
Autowired (org.springframework.beans.factory.annotation.Autowired)1
NamedParameterJdbcTemplate (org.springframework.jdbc.core.namedparam.NamedParameterJdbcTemplate)1
ParameterizedRowMapper (org.springframework.jdbc.core.simple.ParameterizedRowMapper)1
Repository (org.springframework.stereotype.Repository)1
