Examples with IndexDatasetsEvent org.obiba.mica.dataset.event.IndexDatasetsEvent used on opensource projects

Example 1 with IndexDatasetsEvent

use of org.obiba.mica.dataset.event.IndexDatasetsEvent in project mica2 by obiba.

the class ElasticsearchUpgrade method execute.

@Override
public void execute(Version version) {
    log.info("Rebuild elasticsearch indices.");
    cacheService.clearOpalTaxonomiesCache();
    eventBus.post(new IndexStudiesEvent());
    eventBus.post(new IndexFilesEvent());
    eventBus.post(new IndexContactsEvent());
    eventBus.post(new IndexNetworksEvent());
    eventBus.post(new IndexDatasetsEvent());
}

Example 2 with IndexDatasetsEvent

use of org.obiba.mica.dataset.event.IndexDatasetsEvent in project mica2 by obiba.

the class Mica380Upgrade method execute.

@Override
public void execute(Version version) {
    logger.info("Executing Mica upgrade to version 3.8.0");
    cacheService.clearAllCaches();
    eventBus.post(new DeleteTaxonomiesEvent());
    try {
        logger.info("Ensure Study taxonomy's investigator and contact vocabulary are of type `text`");
        ensureVocabularyType(TaxonomyTarget.STUDY, "investigator", "contact");
    } catch (RuntimeException e) {
        logger.error("Error occurred when ensuring Study taxonomy's investigator and contact vocabulary are of type `text`.", e);
    }
    try {
        logger.info("Ensure Network taxonomy's investigator and contact vocabulary are of type `text`");
        ensureVocabularyType(TaxonomyTarget.NETWORK, "investigator", "contact");
    } catch (RuntimeException e) {
        logger.error("Error occurred when ensuring Network taxonomy's investigator and contact vocabulary are of type `text`.", e);
    }
    logger.info("Update all indices, this may take a long while...");
    // TODO implement a queue so that indexing is done in order
    eventBus.post(new IndexStudiesEvent());
    eventBus.post(new IndexFilesEvent());
    eventBus.post(new IndexContactsEvent());
    eventBus.post(new IndexNetworksEvent());
    eventBus.post(new IndexDatasetsEvent());
    eventBus.post(new TaxonomiesUpdatedEvent());
}

Example 3 with IndexDatasetsEvent

use of org.obiba.mica.dataset.event.IndexDatasetsEvent in project mica2 by obiba.

the class MicaConfigResource method updateIndices.

@PUT
@Path("/_index")
@Timed
@RequiresRoles(Roles.MICA_ADMIN)
public Response updateIndices() {
    eventBus.post(new IndexStudiesEvent());
    eventBus.post(new IndexFilesEvent());
    eventBus.post(new IndexContactsEvent());
    eventBus.post(new IndexNetworksEvent());
    eventBus.post(new IndexDatasetsEvent());
    eventBus.post(new IndexProjectsEvent());
    eventBus.post(new TaxonomiesUpdatedEvent());
    return Response.noContent().build();
}

Example 4 with IndexDatasetsEvent

use of org.obiba.mica.dataset.event.IndexDatasetsEvent in project mica2 by obiba.

the class HarmonizationDatasetUpgrade method execute.

@Override
public void execute(Version version) {
    log.info("Executing harmonization datasets network tables upgrade");
    List<HarmonizationDataset> datasets = harmonizationDatasetRepository.findAll();
    datasets.forEach(dataset -> {
        int i = 0;
        for (StudyTable st : dataset.getStudyTables()) {
            st.setWeight(i++);
        }
    });
    harmonizationDatasetRepository.save(datasets);
    eventBus.post(new IndexDatasetsEvent());
}