Examples with Vocabulary org.obiba.opal.core.domain.taxonomy.Vocabulary used on opensource projects

Example 11 with Vocabulary

use of org.obiba.opal.core.domain.taxonomy.Vocabulary in project mica2 by obiba.

the class VocabularyMissingRangeTermsExceptionMapper method getErrorDto.

@Override
protected GeneratedMessage.ExtendableMessage<?> getErrorDto(VocabularyMissingRangeTermsException e) {
    Vocabulary vocabulary = e.getVocabulary();
    ErrorDtos.ClientErrorDto.Builder builder = ErrorDtos.ClientErrorDto.newBuilder().setCode(getStatus().getStatusCode());
    if (vocabulary != null) {
        builder.setMessageTemplate("server.error.taxonomy.range-criterion-missing-terms");
        builder.addArguments(vocabulary.getName());
    }
    return builder.build();
}

Example 12 with Vocabulary

use of org.obiba.opal.core.domain.taxonomy.Vocabulary in project mica2 by obiba.

the class TaxonomyAggregationMetaDataProvider method getVocabulary.

private Optional<Vocabulary> getVocabulary(String aggregation) {
    String key = aggregation.replaceAll("^attributes-", "").replaceAll("-und$", "");
    AttributeKey attrKey = AttributeKey.from(key);
    String targetTaxonomy = attrKey.hasNamespace(null) ? "Default" : attrKey.getNamespace();
    String targetVocabulary = attrKey.getName();
    return // 
    getTaxonomies().stream().filter(// 
    taxonomy -> !Strings.isNullOrEmpty(targetTaxonomy) && taxonomy.getName().equals(targetTaxonomy)).map(// 
    Taxonomy::getVocabularies).flatMap(// 
    Collection::stream).filter(// 
    vocabulary -> vocabulary.getName().equals(targetVocabulary)).findFirst();
}

Example 13 with Vocabulary

use of org.obiba.opal.core.domain.taxonomy.Vocabulary in project mica2 by obiba.

the class TaxonomyAggregationMetaDataProvider method getAllLocalizedMetadata.

private Map<String, LocalizedMetaData> getAllLocalizedMetadata(String aggregation) {
    Optional<Vocabulary> vocabulary = getVocabulary(aggregation);
    if (vocabulary.isPresent()) {
        Map<String, LocalizedMetaData> r = Maps.newHashMap();
        for (Term t : vocabulary.get().getTerms()) {
            LocalizedString title = new LocalizedString();
            title.putAll(t.getTitle());
            LocalizedString description = new LocalizedString();
            description.putAll(t.getDescription());
            String className = t.getAttributeValue("className");
            if (Strings.isNullOrEmpty(className)) {
                className = t.getClass().getSimpleName();
            }
            if (!r.containsKey(t.getName())) {
                r.put(t.getName(), new LocalizedMetaData(title, description, className));
            }
        }
        return r;
    }
    return null;
}

Example 14 with Vocabulary

use of org.obiba.opal.core.domain.taxonomy.Vocabulary in project mica2 by obiba.

the class TaxonomySearchResource method filterVocabulary.

@GET
@Path("/vocabulary/{vocabulary}/_filter")
@Timed
public Opal.VocabularyDto filterVocabulary(@PathParam("name") String name, @PathParam("vocabulary") String vocabularyName, @QueryParam("target") @DefaultValue("variable") String target, @QueryParam("query") String query, @QueryParam("locale") String locale) {
    TaxonomyTarget taxonomyTarget = getTaxonomyTarget(target);
    if (taxonomyTarget.equals(TaxonomyTarget.TAXONOMY))
        return Dtos.asDto(getTaxonomy(taxonomyTarget, name).getVocabulary(vocabularyName));
    List<String> foundVocabularies = filterVocabularies(taxonomyTarget, String.format("name:%s", vocabularyName), locale);
    if (foundVocabularies.isEmpty()) {
        throw new NoSuchVocabularyException(name, vocabularyName);
    }
    Taxonomy taxonomy = getTaxonomy(taxonomyTarget, name);
    Vocabulary vocabulary = taxonomy.getVocabulary(vocabularyName);
    Opal.VocabularyDto.Builder tBuilder = Dtos.asDto(vocabulary, false).toBuilder();
    String filteredQuery = String.format(Strings.isNullOrEmpty(query) ? "taxonomyName:%s AND vocabularyName:%s" : "taxonomyName:%s AND vocabularyName:%s AND (%s)", name, vocabularyName, query);
    Map<String, Map<String, List<String>>> taxoNamesMap = asMap(filterTerms(taxonomyTarget, filteredQuery, locale, null));
    if (taxoNamesMap.isEmpty() || !taxoNamesMap.containsKey(name) || taxoNamesMap.get(name).isEmpty() || taxoNamesMap.get(name).get(vocabularyName).isEmpty())
        return tBuilder.build();
    taxoNamesMap.get(name).get(vocabularyName).forEach(term -> tBuilder.addTerms(Dtos.asDto(vocabulary.getTerm(term))));
    return tBuilder.build();
}