Examples with TaxonSummaries org.openforis.collect.metamodel.TaxonSummaries used on opensource projects

Example 1 with TaxonSummaries

use of org.openforis.collect.metamodel.TaxonSummaries in project collect by openforis.

the class SpeciesImportProcessIntegrationTest method testExport.

@Test
public void testExport() throws Exception {
    SpeciesImportProcess process = importCSVFile(VALID_TEST_CSV);
    SpeciesImportStatus status = process.getStatus();
    assertTrue(status.isComplete());
    CollectTaxonomy taxonomy = taxonomyDao.loadByName(survey, TEST_TAXONOMY_NAME);
    TaxonSummaries summaries = speciesManager.loadFullTaxonSummariesOld(taxonomy);
    assertNotNull(summaries);
}

Example 2 with TaxonSummaries

use of org.openforis.collect.metamodel.TaxonSummaries in project collect by openforis.

the class SpeciesService method loadTaxonSummaries.

@Secured("ROLE_ADMIN")
public TaxonSummariesProxy loadTaxonSummaries(int taxonomyId, int offset, int maxRecords) {
    CollectSurvey survey = getActiveSurvey();
    TaxonSummaries summaries = speciesManager.loadTaxonSummaries(survey, taxonomyId, offset, maxRecords);
    return new TaxonSummariesProxy(summaries);
}

Example 3 with TaxonSummaries

use of org.openforis.collect.metamodel.TaxonSummaries in project collect by openforis.

the class SpeciesBackupImportJobIntegrationTest method testExport.

@Test
public void testExport() throws Exception {
    SpeciesBackupImportJob job = importCSVFile(VALID_TEST_CSV);
    assertTrue(job.isCompleted());
    CollectTaxonomy taxonomy = taxonomyDao.loadByName(survey, TEST_TAXONOMY_NAME);
    TaxonSummaries summaries = speciesManager.loadFullTaxonSummariesOld(taxonomy);
    assertNotNull(summaries);
}

Example 4 with TaxonSummaries

use of org.openforis.collect.metamodel.TaxonSummaries in project collect by openforis.

the class SpeciesManager method loadTaxonSummaries.

public TaxonSummaries loadTaxonSummaries(CollectSurvey survey, int taxonomyId, int offset, int maxRecords) {
    CollectTaxonomy taxonomy = loadTaxonomyById(survey, taxonomyId);
    String taxonomyName = taxonomy.getName();
    int totalCount = taxonDao.countTaxons(taxonomy);
    Set<String> vernacularNamesLanguageCodes = new HashSet<String>();
    List<TaxonSummary> items = new ArrayList<TaxonSummary>();
    TaxonomyDefinition taxonDefinition = survey.getReferenceDataSchema().getTaxonomyDefinition(taxonomyName);
    if (totalCount > 0) {
        List<Taxon> taxons = taxonDao.loadTaxons(taxonomy, offset, maxRecords);
        for (Taxon taxon : taxons) {
            List<TaxonVernacularName> vernacularNames = taxonVernacularNameDao.findByTaxon(taxon.getSystemId());
            TaxonSummary summary = new TaxonSummary(taxonDefinition, taxon, vernacularNames, null);
            List<String> itemVernLangCodes = summary.getVernacularLanguages();
            vernacularNamesLanguageCodes.addAll(itemVernLangCodes);
            items.add(summary);
        }
    }
    List<String> sortedVernacularNamesLanguageCodes = new ArrayList<String>(vernacularNamesLanguageCodes);
    Collections.sort(sortedVernacularNamesLanguageCodes);
    List<String> infoAttributeNames = taxonDefinition.getAttributeNames();
    return new TaxonSummaries(totalCount, items, sortedVernacularNamesLanguageCodes, infoAttributeNames);
}

Example 5 with TaxonSummaries

use of org.openforis.collect.metamodel.TaxonSummaries in project collect by openforis.

the class SpeciesManager method loadFullTaxonSummaries.

public TaxonSummaries loadFullTaxonSummaries(CollectTaxonomy taxonomy) {
    TaxonTree tree = loadTaxonTree(taxonomy);
    List<TaxonSummary> summaries = tree.toSummaries(TaxonRank.FAMILY, true);
    List<String> sortedVernacularNamesLanguageCodes = new ArrayList<String>(tree.getVernacularLanguageCodes());
    Collections.sort(sortedVernacularNamesLanguageCodes);
    List<String> infoAttributeNames = taxonomy.getSurvey().getReferenceDataSchema().getTaxonomyDefinition(taxonomy.getName()).getAttributeNames();
    return new TaxonSummaries(summaries.size(), summaries, sortedVernacularNamesLanguageCodes, infoAttributeNames);
}