Examples with CollectTaxonomy org.openforis.collect.model.CollectTaxonomy used on opensource projects

Example 36 with CollectTaxonomy

use of org.openforis.collect.model.CollectTaxonomy in project collect by openforis.

the class SpeciesImportProcessIntegrationTest method importCSVFile.

public SpeciesImportProcess importCSVFile(String fileName) throws Exception {
    File file = getTestFile(fileName);
    CollectTaxonomy taxonomy = new CollectTaxonomy();
    taxonomy.setSurvey(survey);
    taxonomy.setName(TEST_TAXONOMY_NAME);
    speciesManager.save(taxonomy);
    SpeciesImportProcess process = new SpeciesImportProcess(surveyManager, speciesManager, survey, taxonomy.getId(), file, new CSVFileOptions(), true);
    process.call();
    return process;
}

Example 37 with CollectTaxonomy

use of org.openforis.collect.model.CollectTaxonomy in project collect by openforis.

the class SpeciesService method findByFamilyScientificName.

@Secured("ROLE_ENTRY")
public List<TaxonOccurrenceProxy> findByFamilyScientificName(String taxonomyName, String searchString, int maxResults, TaxonSearchParameters parameters) {
    CollectTaxonomy taxonomy = loadTaxonomyByActiveSurvey(taxonomyName);
    List<TaxonOccurrence> list = speciesManager.findByFamilyScientificName(taxonomy, searchString, maxResults, parameters);
    return Proxies.fromList(list, TaxonOccurrenceProxy.class);
}

Example 38 with CollectTaxonomy

use of org.openforis.collect.model.CollectTaxonomy in project collect by openforis.

the class SpeciesService method findByScientificName.

@Secured("ROLE_ENTRY")
public List<TaxonOccurrenceProxy> findByScientificName(String taxonomyName, String searchString, int maxResults, TaxonSearchParameters parameters) {
    CollectTaxonomy taxonomy = loadTaxonomyByActiveSurvey(taxonomyName);
    List<TaxonOccurrence> list = speciesManager.findByScientificName(taxonomy, searchString, maxResults, parameters);
    return Proxies.fromList(list, TaxonOccurrenceProxy.class);
}

Example 39 with CollectTaxonomy

use of org.openforis.collect.model.CollectTaxonomy in project collect by openforis.

the class SpeciesService method saveTaxonomy.

@Secured("ROLE_ADMIN")
public TaxonomyProxy saveTaxonomy(TaxonomyProxy proxy) {
    CollectSurvey survey = sessionManager.getActiveDesignerSurvey();
    CollectTaxonomy taxonomy;
    Integer taxonomyId = proxy.getId();
    if (taxonomyId == null) {
        taxonomy = new CollectTaxonomy();
    } else {
        taxonomy = speciesManager.loadTaxonomyById(survey, taxonomyId);
    }
    String oldName = taxonomy.getName();
    String newName = proxy.getName();
    if (oldName != null && !oldName.equals(newName)) {
        updateTaxonAttributeDefinitions(oldName, newName);
    }
    proxy.copyPropertiesForUpdate(taxonomy);
    speciesManager.save(taxonomy);
    return new TaxonomyProxy(taxonomy);
}

Example 40 with CollectTaxonomy

use of org.openforis.collect.model.CollectTaxonomy in project collect by openforis.

the class SpeciesService method findByFamilyCode.

@Secured("ROLE_ENTRY")
public List<TaxonOccurrenceProxy> findByFamilyCode(String taxonomyName, String searchString, int maxResults, TaxonSearchParameters parameters) {
    CollectTaxonomy taxonomy = loadTaxonomyByActiveSurvey(taxonomyName);
    List<TaxonOccurrence> list = speciesManager.findByFamilyCode(taxonomy, searchString, maxResults, parameters);
    return Proxies.fromList(list, TaxonOccurrenceProxy.class);
}