Examples with ObsService org.openmrs.api.ObsService used on opensource projects

Example 6 with ObsService

use of org.openmrs.api.ObsService in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldSetValue_CodedMatchingABooleanConceptForObsIfTheAnswerIs0Or1AndQuestionDatatypeIsCoded.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldSetValue_CodedMatchingABooleanConceptForObsIfTheAnswerIs0Or1AndQuestionDatatypeIsCoded() throws Exception {
    ObsService os = Context.getObsService();
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||7^^^^||Collet^Test^Chebaskwony||\r" + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|2|NM|21^CIVIL STATUS^99DCT||1|||||||||20080206";
    // the expected question for the obs in the hl7 message has to be coded
    Assert.assertEquals("Coded", Context.getConceptService().getConcept(21).getDatatype().getName());
    List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(21));
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
    // hacky way to get the newly added obs and make tests on it
    List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(21));
    Obs newObservation = null;
    for (Obs newObs : newList) {
        if (!oldList.contains(newObs) && !newObs.isObsGrouping()) {
            newObservation = newObs;
        }
    }
    Assert.assertEquals(Context.getConceptService().getTrueConcept(), newObservation.getValueCoded());
}

Example 7 with ObsService

use of org.openmrs.api.ObsService in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldSetValue_NumericForObsIfQuestionDatatypeIsNumeric.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldSetValue_NumericForObsIfQuestionDatatypeIsNumeric() throws Exception {
    ObsService os = Context.getObsService();
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||7^^^^||Collet^Test^Chebaskwony||\r" + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|1|NM|5497^CD4, BY FACS^99DCT||450|||||||||20080206";
    // the expected question for the obs in the hl7 message has to be
    // numeric
    Assert.assertEquals("Numeric", Context.getConceptService().getConcept(5497).getDatatype().getName());
    List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
    List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
    Obs newObservation = null;
    for (Obs newObs : newList) {
        if (!oldList.contains(newObs) && !newObs.isObsGrouping()) {
            newObservation = newObs;
        }
    }
    Assert.assertEquals(450, newObservation.getValueNumeric().intValue());
}

Example 8 with ObsService

use of org.openmrs.api.ObsService in project openmrs-core by openmrs.

the class PatientServiceImpl method mergeObservationsNotContainedInEncounters.

private void mergeObservationsNotContainedInEncounters(Patient preferred, Patient notPreferred, PersonMergeLogData mergedData) {
    // move all obs that weren't contained in encounters
    // TODO: this should be a copy, not a move
    ObsService obsService = Context.getObsService();
    for (Obs obs : obsService.getObservationsByPerson(notPreferred)) {
        if (obs.getEncounter() == null && !obs.getVoided()) {
            obs.setPerson(preferred);
            Obs persisted = obsService.saveObs(obs, "Merged from patient #" + notPreferred.getPatientId());
            mergedData.addMovedIndependentObservation(persisted.getUuid());
        }
    }
}

Example 9 with ObsService

use of org.openmrs.api.ObsService in project openmrs-core by openmrs.

the class EncounterServiceImpl method unvoidEncounter.

/**
 * @see org.openmrs.api.EncounterService#unvoidEncounter(org.openmrs.Encounter)
 */
@Override
public Encounter unvoidEncounter(Encounter encounter) throws APIException {
    // if authenticated user is not supposed to edit encounter of certain type
    if (!canEditEncounter(encounter, null)) {
        throw new APIException("Encounter.error.privilege.required.unvoid", new Object[] { encounter.getEncounterType().getEditPrivilege() });
    }
    String voidReason = encounter.getVoidReason();
    if (voidReason == null) {
        voidReason = "";
    }
    ObsService os = Context.getObsService();
    for (Obs o : encounter.getObsAtTopLevel(true)) {
        if (voidReason.equals(o.getVoidReason())) {
            os.unvoidObs(o);
        }
    }
    OrderService orderService = Context.getOrderService();
    for (Order o : encounter.getOrders()) {
        if (voidReason.equals(o.getVoidReason())) {
            orderService.unvoidOrder(o);
        }
    }
    encounter.setVoided(false);
    encounter.setVoidedBy(null);
    encounter.setDateVoided(null);
    encounter.setVoidReason(null);
    Context.getEncounterService().saveEncounter(encounter);
    return encounter;
}

Example 10 with ObsService

use of org.openmrs.api.ObsService in project openmrs-core by openmrs.

the class EncounterServiceImpl method purgeEncounter.

/**
 * @see org.openmrs.api.EncounterService#purgeEncounter(Encounter, boolean)
 */
@Override
public void purgeEncounter(Encounter encounter, boolean cascade) throws APIException {
    // if authenticated user is not supposed to edit encounter of certain type
    if (!canEditEncounter(encounter, null)) {
        throw new APIException("Encounter.error.privilege.required.purge", new Object[] { encounter.getEncounterType().getEditPrivilege() });
    }
    if (cascade) {
        ObsService obsService = Context.getObsService();
        List<Encounter> justThisEncounter = new ArrayList<>();
        justThisEncounter.add(encounter);
        List<Obs> observations = new ArrayList<>(obsService.getObservations(null, justThisEncounter, null, null, null, null, null, null, null, null, null, true));
        for (Obs o : observations) {
            obsService.purgeObs(o);
        }
        Set<Order> orders = encounter.getOrders();
        for (Order o : orders) {
            Context.getOrderService().purgeOrder(o);
        }
    }
    Context.getEncounterService().purgeEncounter(encounter);
}