Examples with ConceptNumericBuilder org.openmrs.module.metadatadeploy.builder.ConceptNumericBuilder used on opensource projects

Example 1 with ConceptNumericBuilder

use of org.openmrs.module.metadatadeploy.builder.ConceptNumericBuilder in project openmrs-module-pihcore by PIH.

the class DeathConcepts method installNewVersion.

@Override
protected void installNewVersion() throws Exception {
    Concept yes = MetadataUtils.existing(Concept.class, CommonConcepts.Concepts.YES);
    Concept no = MetadataUtils.existing(Concept.class, CommonConcepts.Concepts.NO);
    Concept home = MetadataUtils.existing(Concept.class, AnswerConcepts.Concepts.HOME);
    Concept hospital = MetadataUtils.existing(Concept.class, AnswerConcepts.Concepts.HOSPITAL);
    Concept outsideOfInstitution = MetadataUtils.existing(Concept.class, AnswerConcepts.Concepts.OUTSIDE_OF_INSTITUTION);
    Concept otherNonCoded = MetadataUtils.existing(Concept.class, CommonConcepts.Concepts.OTHER_NON_CODED);
    Concept familyMember = MetadataUtils.existing(Concept.class, AnswerConcepts.Concepts.FAMILY_MEMBER);
    Concept police = MetadataUtils.existing(Concept.class, AnswerConcepts.Concepts.POLICE);
    Concept surgery = MetadataUtils.existing(Concept.class, AnswerConcepts.Concepts.SURGERY);
    install(new ConceptBuilder("e2d8ea09-3c19-4574-92f3-b3ea67187986").datatype(text).conceptClass(question).name("9c194ad7-331b-410b-ac20-2a8dab166dd2", "Location of death at institution", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("6b1acb11-5fb0-4ea7-9532-6c81544b8eba", "Hospital service or outpatient clinic where the patient died. (A location.) \n\nAn observation of this concept implies that the patient died in a healthcare institution managed by this EMR system.", Locale.ENGLISH).mapping(new ConceptMapBuilder("2e9ce64f-2b2b-4648-b70b-3af895eb83a8").type(sameAs).ensureTerm(pih, "Location of death at institution").build()).mapping(new ConceptMapBuilder("50eebcc7-d330-4af9-b6b3-d61211e07978").type(sameAs).ensureTerm(pih, "9709").build()).build());
    install(new ConceptBuilder("e4310421-915a-4720-9d6a-42f5ca2ae975").datatype(text).conceptClass(question).name("e17f482c-c814-4ae6-ae07-bd6d29d707a9", "Location of death, non-coded", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("afe40b97-be99-46a7-bd76-bedaa7f5a037", "Where did the patient die, if it cannot be represented by a coded answer to \"Location of death\"", Locale.ENGLISH).mapping(new ConceptMapBuilder("85ba20be-383f-4539-b584-5790e76c0f1e").type(sameAs).ensureTerm(pih, "9708").build()).mapping(new ConceptMapBuilder("073d4569-c1d0-4aef-bd04-20060f85ff11").type(sameAs).ensureTerm(pih, "Location of death non coded").build()).build());
    install(new ConceptBuilder("ea2a816b-a8fc-437f-949d-391314f17445").datatype(text).conceptClass(question).name("8a24c13d-a614-4251-85f9-be5526708ad1", "Condition contributing to the death but not related to the disease or morbid condition, non-coded", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("e374ee4d-5baa-48a5-b24b-ccc7020a2a26", "Condition contributing to the death, non-coded", Locale.ENGLISH, null).description("a2d423b7-9da2-4af4-8f1e-e619c049e3df", "Condition contributing to the death but not related to the disease or morbid condition, as free-text", Locale.ENGLISH).mapping(new ConceptMapBuilder("87ec0d78-048f-423a-8732-b04de82c796e").type(sameAs).ensureTerm(pih, "9723").build()).mapping(new ConceptMapBuilder("6ed991d3-e5ad-4b4f-9c6c-601a35c0412c").type(sameAs).ensureTerm(pih, "Condition contributing to the death non coded").build()).build());
    install(new ConceptBuilder("07501ef7-e073-4541-a9e5-a697d91e1370").datatype(coded).conceptClass(finding).name("bc50cee2-8468-4b3b-8f0e-a5f95890df7c", "Location of death", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("717517a6-e488-457e-8320-6e42b816c0b2", "Lieu du décès", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("ca30ec30-292b-4b59-8c4d-5b0c10d87308", "Where did the patient die?", Locale.ENGLISH).mapping(new ConceptMapBuilder("0bdb3d14-77b8-4d38-8a12-1b6ad26d5713").type(sameAs).ensureTerm(pih, "9669").build()).mapping(new ConceptMapBuilder("0225e69b-cc73-420a-b54d-93c1b7ce8921").type(sameAs).ensureTerm(pih, "Location of death").build()).answers(home, hospital, outsideOfInstitution, otherNonCoded).build());
    install(new ConceptBuilder("59ded805-b258-43f1-bd89-9fcb7e51a375").datatype(coded).conceptClass(diagnosis).name("6f43829f-b338-489a-af10-531992fd929f", "Final disease resulting in death", Locale.ENGLISH, // locale-preferred
    null).name("2a41c308-2b82-40fe-9d73-c67efacd8a77", "Final disease or condition resulting in death", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("22562a24-8ec1-463e-9562-d6e5564a88cd", "Maladie ou ayant directement provoqué le décès", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).mapping(new ConceptMapBuilder("01142bc3-575e-42bf-95e1-c7147428e006").type(sameAs).ensureTerm(pih, "Final disease resulting in death").build()).mapping(new ConceptMapBuilder("1b953954-e0ad-4838-8d0f-4d595dfe5e60").type(sameAs).ensureTerm(pih, "9676").build()).build());
    install(new ConceptBuilder("c86df3dd-4e05-4aab-ba0d-3003d559cdbe").datatype(coded).conceptClass(question).name("730f5e1b-9bb4-497a-aca3-553dc500d80b", "Maternal death", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("a51ac050-0309-4d2c-bb53-91fe6153be44", "Is the mother alive?", Locale.ENGLISH).mapping(new ConceptMapBuilder("85eab777-6dba-41ee-89fe-001c74f71f65").type(sameAs).ensureTerm(pih, "Maternal death").build()).mapping(new ConceptMapBuilder("5e9327f2-a09a-4e59-9d53-a12df62317e1").type(sameAs).ensureTerm(pih, "9668").build()).answers(yes, no).build());
    Concept diagnosisSequenceNumber = install(new ConceptNumericBuilder("1815AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA").precise(false).datatype(numeric).conceptClass(misc).name("2095BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "DIAGNOSIS SEQUENCE NUMBER", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("105907BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "NUMÉRO D'ORDRE DES DIAGNOSTICS", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("1625FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF", "The number/order of a diagnosis on a list or death certificate.", Locale.ENGLISH).mapping(new ConceptMapBuilder("2c836f5d-2346-4c44-92c6-c3272120ac5c").type(sameAs).ensureTerm(pih, "9712").build()).mapping(new ConceptMapBuilder("b8a7f15d-82c0-4571-b4fb-cf1a577b84f7").type(sameAs).ensureTerm(ciel, "1815").build()).build());
    Concept causeOfDeathFromCertificate = install(new ConceptBuilder(CAUSE_OF_DEATH_FROM_DEATH_CERTIFICATE).datatype(coded).conceptClass(question).name("2094BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "CAUSE OF DEATH FROM DEATH CERTIFICATE", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("105848BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "CAUSE DU DÉCÈS SUR CERTIFICAT DE DÉCÈS", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).mapping(new ConceptMapBuilder("2af0667b-3a89-4aac-a873-5a2900c2240b").type(sameAs).ensureTerm(pih, "9713").build()).mapping(new ConceptMapBuilder("cc260f30-e152-49a3-ac29-b85c4845e25b").type(sameAs).ensureTerm(ciel, "1814").build()).mapping(new ConceptMapBuilder("141593ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(sameAs).ensureTerm(snomedMvp, "18141000105007").build()).mapping(new ConceptMapBuilder("137578ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(narrowerThan).ensureTerm(snomedNp, "184305005").build()).build());
    Concept probableCauseOfDeath = install(new ConceptBuilder("160218AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA").datatype(text).conceptClass(question).name("108120BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Probable cause of death (text)", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).mapping(new ConceptMapBuilder("caa6e803-c410-47cc-846b-8f84eb0b400e").type(sameAs).ensureTerm(pih, "9715").build()).mapping(new ConceptMapBuilder("217351ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(sameAs).ensureTerm(ciel, "160218").build()).mapping(new ConceptMapBuilder("144080ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(narrowerThan).ensureTerm(snomedNp, "184305005").build()).build());
    install(new ConceptBuilder("1816AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA").datatype(notApplicable).conceptClass(convSet).name("2096BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "CAUSES OF DEATH FROM DEATH CERTIFICATE", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("105850BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "CAUSES DU DÉCÈS SUR CERTIFICAT DE DÉCÈS", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("1626FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF", "Ordered list of causes of death from death certificate", Locale.ENGLISH).mapping(new ConceptMapBuilder("5111c9c3-0894-4b9f-9c03-92f3d8da6156").type(sameAs).ensureTerm(pih, "9714").build()).mapping(new ConceptMapBuilder("70211dda-7985-4489-be51-e19c58e7ae88").type(sameAs).ensureTerm(ciel, "1816").build()).mapping(new ConceptMapBuilder("137579ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(narrowerThan).ensureTerm(snomedNp, "184305005").build()).mapping(new ConceptMapBuilder("141594ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(sameAs).ensureTerm(snomedMvp, "18161000105006").build()).setMembers(diagnosisSequenceNumber, causeOfDeathFromCertificate, probableCauseOfDeath).build());
    install(new ConceptBuilder("9cb08a8b-19f2-49df-85f1-57c66ea63832").datatype(coded).conceptClass(question).name("11109d13-834c-4d94-9895-14d44d41e6ce", "Visited provider during illness", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("69d27c06-165e-4de3-a122-4e980d112749", "Visité un personnel de santé au cours de maladie", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("f2006f9f-2ea3-41ba-a2ca-c24150f0ff0d", "Did the person visit a provider during the sickness?", Locale.ENGLISH).mapping(new ConceptMapBuilder("d9a47600-36bb-4644-817c-8593d7051ad7").type(sameAs).ensureTerm(pih, "9671").build()).mapping(new ConceptMapBuilder("b9509e02-4b12-41bd-9e36-824548b3e85c").type(sameAs).ensureTerm(pih, "Visited provider during illness").build()).answers(yes, no).build());
    Concept mortician = install(new ConceptBuilder("0b725999-8fa0-40e0-b140-a5dfac05403c").datatype(notApplicable).conceptClass(misc).name("111496ab-31cc-4e9a-8bdb-b6f629fe13a3", "Mortician", Locale.ENGLISH, // locale-preferred
    null).name("473f645d-cb32-490d-b306-560774d54dd7", "Funeral home staff", Locale.ENGLISH, null).name("78f45753-4148-43a1-b904-aa9ef5773a96", "Undertaker", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("a98c1ca2-fef3-4818-9f82-2e614daa35f2", "Funeral director", Locale.ENGLISH, null).name("3c72ec96-42ac-46ae-a8e7-c36f1895af18", "Pompe funèbres", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).mapping(new ConceptMapBuilder("d64695ce-a749-4ff8-894f-b0aba79c8431").type(sameAs).ensureTerm(pih, "Undertaker").build()).mapping(new ConceptMapBuilder("d0f017dc-0f18-4941-8f41-bd5769f49237").type(sameAs).ensureTerm(pih, "9673").build()).build());
    install(new ConceptBuilder("5112fbab-db4a-4e67-aa96-be1bfbc0c2d1").datatype(coded).conceptClass(question).name("db2b86a9-d43c-458c-a985-327a814a67d0", "Source of information", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("b25ec3ad-8fc1-482a-b79d-8f5fab3feccd", "Source d'information", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).mapping(new ConceptMapBuilder("048b6945-c09d-4715-8984-e00b6ed78cca").type(sameAs).ensureTerm(pih, "9672").build()).mapping(new ConceptMapBuilder("9ef74eb4-d9e7-4a05-84bc-d1918113841e").type(sameAs).ensureTerm(pih, "Source of information").build()).answers(familyMember, police, mortician, otherNonCoded).build());
    install(new ConceptBuilder("cf68b8c0-5d4d-4835-a40d-bc30e0cf5d95").datatype(text).conceptClass(question).name("61b214fb-888f-4fa0-9edb-44fd872309be", "Burial certificate number", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("9d8755e8-be55-4749-bafe-b67974cb01a3", "Burial permit", Locale.ENGLISH, null).name("6cfb0bea-d4bf-4e81-be3f-1a83000cf26a", "Burial certificate", Locale.ENGLISH, null).name("d6f2eeb0-cc9e-4c22-abef-f40ddffad5ce", "Permit d'inhumer", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).mapping(new ConceptMapBuilder("3be725fb-2988-4415-b71f-89b30dcb75bb").type(sameAs).ensureTerm(pih, "Burial certificate").build()).mapping(new ConceptMapBuilder("b13384e0-fa9b-46b7-a57e-af989a606f45").type(sameAs).ensureTerm(pih, "9680").build()).build());
    install(new ConceptBuilder("fa03343d-2143-4769-b421-a018717cd13b").datatype(coded).conceptClass(diagnosis).name("c8f588cc-133c-4c62-a04b-c347d8f31d68", "Condition contributing to the death", Locale.ENGLISH, // locale-preferred
    null).name("75a26b39-c8e0-4b65-83ef-9b1f2be7161d", "Condition contributing to the death but not related to the disease or morbid condition", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).description("b6f07641-b175-437f-adde-438547a78981", "Condition contributing to the death but not related to the disease or morbid condition", Locale.ENGLISH).mapping(new ConceptMapBuilder("cac289be-04e3-4dff-9f4d-d2201945f42d").type(sameAs).ensureTerm(pih, "9678").build()).mapping(new ConceptMapBuilder("1526b421-e9ab-4493-9682-6a620bf2bfb6").type(sameAs).ensureTerm(pih, "Condition contributing to the death").build()).build());
    Concept autopsy = install(new ConceptBuilder("7198e4f4-8bf0-4816-92cb-569b62bc2fef").datatype(notApplicable).conceptClass(misc).name("e767ddbb-53fa-44f8-97b7-ed47e1c97e61", "Autopsy", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("0f3edffb-88cd-40f1-b9ab-9b960e9067b3", "Obduction", Locale.ENGLISH, null).name("76943508-c269-4d73-8158-3e34964a1a49", "Post-mortem examination", Locale.ENGLISH, null).name("d4db623c-55f8-4f0f-99a5-296423f19808", "Autopsia cadaverum", Locale.ENGLISH, null).name("cee5fea8-93b5-4da1-8fc7-5d3343be03a0", "Autopsie", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("206bea47-900d-4393-8804-b629a442bccb", "An autopsy is a highly specialized surgical procedure that consists of a thorough examination of a corpse to determine the cause and manner of death and to evaluate any disease or injury that may be present. It is usually performed by a specialized medical doctor called a pathologist.", Locale.ENGLISH).mapping(new ConceptMapBuilder("8197c3be-2399-423d-81a0-4dc05d926f5c").type(sameAs).ensureTerm(pih, "Autopsy").build()).mapping(new ConceptMapBuilder("1aaa2d94-250b-4f3b-b3ac-fce9af8a4cf0").type(sameAs).ensureTerm(pih, "9682").build()).build());
    install(new ConceptBuilder("b3f04355-1e38-477e-9664-feda30c0aedb").datatype(coded).conceptClass(question).name("e028e91c-3498-45b7-a2e5-f0fc0731e821", "Method of confirming death", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("00f0132f-4ef3-4ba9-bb35-c396777d673f", "Moyen de confirmation du diagnostic", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("a18206ce-c93b-4f5e-9cb9-f2d85f27ee89", "How was the cause of death confirmed?", Locale.ENGLISH).mapping(new ConceptMapBuilder("a9752950-23bd-442a-bd8e-5bba63f44464").type(sameAs).ensureTerm(pih, "Method of confirming death").build()).mapping(new ConceptMapBuilder("5d355151-550e-4207-aa0a-b4dff5d15e82").type(sameAs).ensureTerm(pih, "9681").build()).answers(autopsy, surgery).build());
    install(new ConceptBuilder("eeb48585-432a-48be-af84-c2f2b8c5b541").datatype(text).conceptClass(question).name("9ff10896-e6c3-4c7c-9249-b430c1747031", "Circumstances of death", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("08bbc806-32dd-44fe-8e75-62310a912ab2", "Description of death by non-clinician", Locale.ENGLISH, null).name("e7607abd-c2e6-44b2-980e-004759df2c20", "Circonstances du décès", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("ee223551-4f65-4f79-aab2-cfca818f691d", "Description of death from a non-medical background", Locale.ENGLISH).mapping(new ConceptMapBuilder("349807f4-57b6-4351-bb09-292f547bdfd5").type(sameAs).ensureTerm(pih, "Circumstances of death").build()).mapping(new ConceptMapBuilder("b8f0135c-4d68-41b9-b8c5-eff1096e4108").type(sameAs).ensureTerm(pih, "9675").build()).build());
    install(new ConceptBuilder("c983f4d2-7e8d-4336-ac56-f4bec4f4cfc9").datatype(coded).conceptClass(question).name("d1bea751-68b8-4b7f-830d-567456eb26ed", "Underlying cause of death", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("25582932-056b-4739-abbd-341bec6d5f0d", "Cause sous-jacente de la mort", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("304e9546-d0f7-4330-b980-45c3d7a09b02", "Line 4 of the death certificate", Locale.ENGLISH).mapping(new ConceptMapBuilder("9c522d02-d6ac-4b19-b845-60ad844cda89").type(sameAs).ensureTerm(pih, "9679").build()).mapping(new ConceptMapBuilder("9d64cd23-866d-49d5-b52b-70112776b331").type(sameAs).ensureTerm(pih, "Underlying cause of death").build()).build());
    install(new ConceptBuilder("12a8fbd6-8ac9-4bb1-ac25-b3c25661ba85").datatype(coded).conceptClass(diagnosis).name("c4b4dc79-72e4-45bd-b1d6-4da66939bc9e", "Condition causing the final disease", Locale.ENGLISH, // locale-preferred
    null).name("3e5204bb-fabd-4c96-9ac1-c57b8258d150", "Condition which caused the final disease or condition", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("b9ff3a12-8bc9-4c45-9575-2e48da83b573", "Affectations morbides ayant éventuellement conduit a l'état préciser l'affectation initiale étant indiquée en dernier lieu", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("68bb8153-da6d-4e19-a4ad-2169f8896857", "Conditions qui causent des maladies finale", Locale.FRENCH, null).description("700f71f8-336d-4b08-b648-b8baecfd96cc", "The 2nd line on the death certificate", Locale.ENGLISH).mapping(new ConceptMapBuilder("366d1dc5-3d60-492c-8823-3ca6c03d26fd").type(sameAs).ensureTerm(pih, "9677").build()).mapping(new ConceptMapBuilder("c500e3a2-2252-4efd-85c7-ce2ae1a792fa").type(sameAs).ensureTerm(pih, "Condition causing the final disease").build()).build());
    install(new ConceptNumericBuilder("6e656477-72e2-4ecf-a777-0c488c4a14e2").units("days").precise(false).datatype(numeric).conceptClass(question).name("c2424b53-cc4b-415c-998a-1c5365c3af9d", "Duration of hospitalization during which patient died, in days", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("da7384c7-29fa-4806-af62-5a3681cfa34a", "If the patient died while hospitalized, then this concept represents the duration of that hospitalization, in days", Locale.ENGLISH).mapping(new ConceptMapBuilder("ce3e74e7-53d8-4e73-88ab-8191ab5c1aa1").type(sameAs).ensureTerm(pih, "Duration of hospitalization when patient died").build()).mapping(new ConceptMapBuilder("8334471b-ba18-453a-8ce8-747911c01e06").type(sameAs).ensureTerm(pih, "9710").build()).build());
    // Update Death-related Global Properties
    setGlobalProperty("concept.causeOfDeath", causeOfDeathFromCertificate.getId().toString());
}

Example 2 with ConceptNumericBuilder

use of org.openmrs.module.metadatadeploy.builder.ConceptNumericBuilder in project openmrs-module-pihcore by PIH.

the class TestOrderConcepts method installNewVersion.

@Override
protected void installNewVersion() throws Exception {
    install(new ConceptNumericBuilder(Concepts.HEMATOCRIT).units("%").precise(true).hiNormal(50.0).lowAbsolute(0.0).lowNormal(35.0).datatype(numeric).conceptClass(test).name("3e148d20-26fe-102b-80cb-0017a47871b2", "Hematocrit", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("94b8dc5a-07d4-102c-b5fa-0017a47871b2", "Packed cell volume", Locale.ENGLISH, null).name("0b7ba816-15f5-102d-96e4-000c29c2a5d7", "Hct", Locale.ENGLISH, ConceptNameType.SHORT).name("93f3926a-07d4-102c-b5fa-0017a47871b2", "CRIT", Locale.ENGLISH, null).name("0b851fb8-15f5-102d-96e4-000c29c2a5d7", "HCT", Locale.ENGLISH, null).name("9562d11a-07d4-102c-b5fa-0017a47871b2", "PCV", Locale.ENGLISH, null).name("e552c9d0-a77e-4d89-8936-522d9fa0f06c", "Hématocrite", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("ece3785c-07fe-102c-b5fa-0017a47871b2", "Percent of whole blood that is composed of red blood cells.", Locale.ENGLISH).mapping(new ConceptMapBuilder("b20c2adc-4864-102e-96e9-000c29c2a5d7").type(sameAs).ensureTerm(pih, "1015").build()).mapping(new ConceptMapBuilder("75683d52-4943-102e-96e9-000c29c2a5d7").type(sameAs).ensureTerm(pih, "HEMATOCRIT").build()).mapping(new ConceptMapBuilder("c8d1d90d-ac94-4a03-8515-664fcd1d9f89").type(sameAs).ensureTerm(loinc, "20570-8").build()).build());
    install(new ConceptNumericBuilder(Concepts.HEMOGLOBIN).units("g/dl").precise(true).hiAbsolute(20.0).lowAbsolute(2.0).lowNormal(11.5).datatype(numeric).conceptClass(test).name("3e09b800-26fe-102b-80cb-0017a47871b2", "Hemoglobin", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("0b853dd6-15f5-102d-96e4-000c29c2a5d7", "HGB", Locale.ENGLISH, null).name("94aa1e22-07d4-102c-b5fa-0017a47871b2", "Hb", Locale.ENGLISH, null).name("0b7b1982-15f5-102d-96e4-000c29c2a5d7", "Hb", Locale.ENGLISH, ConceptNameType.SHORT).name("c90bd06f-0bda-48b9-8968-0614743602e8", "Hémoglobine", Locale.FRENCH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).description("ecd675d0-07fe-102c-b5fa-0017a47871b2", "The iron-containing respiratory pigment in red blood cells of vertebrates, consisting of about 6 percent heme and 94 percent globin.", Locale.ENGLISH).mapping(new ConceptMapBuilder("b1c14288-4864-102e-96e9-000c29c2a5d7").type(sameAs).ensureTerm(pih, "21").build()).mapping(new ConceptMapBuilder("c3e2d313-086e-445f-9fe5-2e5715903a1e").type(sameAs).ensureTerm(loinc, "718-7").build()).mapping(new ConceptMapBuilder("73800682-4943-102e-96e9-000c29c2a5d7").type(sameAs).ensureTerm(pih, "HEMOGLOBIN").build()).build());
}

Example 3 with ConceptNumericBuilder

use of org.openmrs.module.metadatadeploy.builder.ConceptNumericBuilder in project openmrs-module-pihcore by PIH.

the class VaccinationConcepts method installNewVersion.

@Override
protected void installNewVersion() throws Exception {
    Concept vaccinationGiven = install(new ConceptBuilder("2dc6c690-a5fe-4cc4-97cc-32c70200a2eb").conceptClass(convSet).datatype(coded).name("1034BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Immunizations", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("107784BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Vaccinations", Locale.ENGLISH, null).description("986FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF", "Captures an immunization that has been administered to the patient, either before or during the encounter containing an observation of this concept.", Locale.ENGLISH).mapping(new ConceptMapBuilder("133795ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(sameAs).ensureTerm(snomedCt, "33879002").build()).mapping(new ConceptMapBuilder("171250ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(sameAs).ensureTerm(ciel, "984").build()).build());
    Concept vaccinationDate = install(new ConceptBuilder("1410AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA").conceptClass(finding).datatype(date).name("1565BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Vaccination date", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("107781BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Immunization date", Locale.ENGLISH, null).name("86865BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Vaccination date", Locale.ENGLISH, ConceptNameType.SHORT).name("1566BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Date de vaccination", Locale.FRENCH, ConceptNameType.FULLY_SPECIFIED).name("1567BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "tarehe ya kupewa chanjo/Kinga", locale_SWAHILI, ConceptNameType.FULLY_SPECIFIED).description("1379FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF", "The full date of a vaccination", Locale.ENGLISH).mapping(new ConceptMapBuilder("171662ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(sameAs).ensureTerm(ciel, "1410").build()).build());
    Concept vaccinationSequenceNumber = install(// our copy of CIEL:1418
    new ConceptNumericBuilder("ef6b45b4-525e-4d74-bf81-a65a41f3feb9").conceptClass(finding).datatype(numeric).lowAbsolute(0d).precise(false).name("1577BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Immunization sequence number", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("107783BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Vaccination sequence number", Locale.ENGLISH, null).name("86873BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "immunization no", Locale.ENGLISH, ConceptNameType.SHORT).name("1578BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Numéro des vaccinations", Locale.FRENCH, ConceptNameType.FULLY_SPECIFIED).mapping(new ConceptMapBuilder("171670ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(sameAs).ensureTerm(ciel, "1418").build()).build());
    Concept vaccinationConstruct = install(// CIEL:1421, but with fewer answers
    new ConceptBuilder("74260088-9c83-41d5-b92b-03a41654daaf").conceptClass(finding).datatype(notApplicable).name("1585BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Immunization history", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("107785BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "vaccination history", Locale.ENGLISH, null).name("107786BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "vaccination hx", Locale.ENGLISH, null).name("86876BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "immunization hx", Locale.ENGLISH, ConceptNameType.SHORT).name("1586BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Historique vaccinale", Locale.FRENCH, ConceptNameType.FULLY_SPECIFIED).name("110133BBBBBBBBBBBBBBBBBBBBBBBBBBBBBB", "Historia ya Chanjo", locale_SWAHILI, ConceptNameType.FULLY_SPECIFIED).description("921f5876-a0fc-47a0-bd0f-ff818c5c1c9c", "Vaccations that this patient has already received (in the past or in the current visit)", Locale.ENGLISH).setMembers(vaccinationGiven, vaccinationSequenceNumber, vaccinationDate).mapping(new ConceptMapBuilder("136923ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(sameAs).ensureTerm(snomedCt, "425457005").build()).mapping(new ConceptMapBuilder("171673ABBBBBBBBBBBBBBBBBBBBBBBBBBBBB").type(sameAs).ensureTerm(ciel, "1421").build()).build());
    install(new ConceptBuilder("3cd4e004-26fe-102b-80cb-0017a47871b2").datatype(notApplicable).conceptClass(procedure).name("93ee06ce-07d4-102c-b5fa-0017a47871b2", "BCG vaccine", Locale.ENGLISH, // locale-preferred
    null).name("3e12ca08-26fe-102b-80cb-0017a47871b2", "BACILLE CAMILE-GUERIN VACCINATION", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("9388e7c6-07d4-102c-b5fa-0017a47871b2", "BCG", Locale.ENGLISH, ConceptNameType.SHORT).name("93edfd82-07d4-102c-b5fa-0017a47871b2", "BCG", Locale.ENGLISH, null).name("f5b02afa-d5db-102d-ad2a-000c29c2a5d7", "VACCINATION DU BACILLE DE CALMETTE-GUÉRIN", Locale.FRENCH, // locale-preferred
    null).description("ece17228-07fe-102c-b5fa-0017a47871b2", "Deactivated tuberculous agent as basis for tuberculosis vaccination.", Locale.ENGLISH).mapping(new ConceptMapBuilder("b20a68dc-4864-102e-96e9-000c29c2a5d7").type(sameAs).ensureTerm(pih, "886").build()).mapping(new ConceptMapBuilder("753c8888-4943-102e-96e9-000c29c2a5d7").type(sameAs).ensureTerm(pih, "BACILLE CAMILE-GUERIN VACCINATION").build()).build());
    install(new ConceptBuilder("3cd42c36-26fe-102b-80cb-0017a47871b2").datatype(notApplicable).conceptClass(procedure).name("3e11e7dc-26fe-102b-80cb-0017a47871b2", "Oral polio vaccination", Locale.ENGLISH, // locale-preferred
    ConceptNameType.FULLY_SPECIFIED).name("94b884e4-07d4-102c-b5fa-0017a47871b2", "ORAL POLIO VAX NO.3", Locale.ENGLISH, null).name("95636e22-07d4-102c-b5fa-0017a47871b2", "POLIO VAX NO.0", Locale.ENGLISH, null).name("95637ad4-07d4-102c-b5fa-0017a47871b2", "POLIO VAX NO.3", Locale.ENGLISH, null).name("9563721e-07d4-102c-b5fa-0017a47871b2", "POLIO VAX NO.1", Locale.ENGLISH, null).name("95637692-07d4-102c-b5fa-0017a47871b2", "POLIO VAX NO.2", Locale.ENGLISH, null).name("94b877d8-07d4-102c-b5fa-0017a47871b2", "ORAL POLIO VAX NO.0", Locale.ENGLISH, null).name("94b88048-07d4-102c-b5fa-0017a47871b2", "ORAL POLIO VAX NO.2", Locale.ENGLISH, null).name("94b87c1a-07d4-102c-b5fa-0017a47871b2", "ORAL POLIO VAX NO.1", Locale.ENGLISH, null).name("f5a682a2-d5db-102d-ad2a-000c29c2a5d7", "VACCINATION ORALE ANTIPOLIOMYÉLITE", Locale.FRENCH, // locale-preferred
    null).description("ece065ae-07fe-102c-b5fa-0017a47871b2", "Vaccination given for polio.", Locale.ENGLISH).mapping(new ConceptMapBuilder("8ad98af3-e438-4b7a-b667-922854aad62e").type(sameAs).ensureTerm(pih, "ORAL POLIO VACCINATION").build()).mapping(new ConceptMapBuilder("b2094e98-4864-102e-96e9-000c29c2a5d7").type(sameAs).ensureTerm(pih, "783").build()).build());
    // from OCL
    install(new ConceptBuilder("1423AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA").datatype(notApplicable).conceptClass(drug).name("8ab170aa2be7433ab50e0e9ccd81369a", "PENTAVALENT PNEUMOVAX", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("878025f9e4d7428b9cbea96d8cf62558", "pneumovax", Locale.ENGLISH, ConceptNameType.SHORT).name("af7039b37b384238b51dca3446a506f5", "IMMUNIZATION, PENTAVALENT PNEUMOVAX", Locale.ENGLISH, null).name("73a0cb5b858d4234a8073704233c5efe", "VACCINATION, PENTAVALENT PNEUMOVAX", Locale.ENGLISH, null).mapping(new ConceptMapBuilder("553069d350d61b02e14f3c77").type(sameAs).ensureTerm(ciel, "1423").build()).mapping(new ConceptMapBuilder("19e25e62-cf4e-324e-9c07-0c0d56de6274").type(sameAs).ensureTerm(snomedCt, "12866006").build()).build());
    // from OCL
    install(new ConceptBuilder("83531AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA").datatype(notApplicable).conceptClass(drug).name("9ea2957f48e645c48e95795db69130e1", "ROTAVIRUS VACCINE, LIVE", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).mapping(new ConceptMapBuilder("55306ca550d61b02e14f6cf7").type(sameAs).ensureTerm(ciel, "83531").build()).mapping(new ConceptMapBuilder("39edda7a-16fc-3e5a-ab41-38cb4874bed1").type(sameAs).ensureTerm(rxNorm, "253199").build()).build());
    // from OCL
    install(new ConceptBuilder("162586AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA").datatype(notApplicable).conceptClass(drug).name("406627b252a9401a86b143fa53f323f1", "Measles-Rubella vaccine", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("b0cb25bd523746998434cf4ad6751d2c", "rubeole-rougeole vaccine", Locale.FRENCH, ConceptNameType.FULLY_SPECIFIED).mapping(new ConceptMapBuilder("5530b2fd50d61b02e150bc8d").type(sameAs).ensureTerm(ciel, "162586").build()).build());
    install(new ConceptBuilder("3ccc6b7c-26fe-102b-80cb-0017a47871b2").datatype(notApplicable).conceptClass(drug).name("956a4d6e-07d4-102c-b5fa-0017a47871b2", "TD BOOSTER", Locale.ENGLISH, null).name("3e09b26a-26fe-102b-80cb-0017a47871b2", "DIPTHERIA TETANUS BOOSTER", Locale.ENGLISH, ConceptNameType.FULLY_SPECIFIED).name("f560f962-d5db-102d-ad2a-000c29c2a5d7", "INJECTION DE RAPPEL: DIPTHÉRIE TÉTANOS ", Locale.FRENCH, // locale-preferred
    null).description("ecd66e50-07fe-102c-b5fa-0017a47871b2", "Vaccination against diptheria and tetanus (IM).", Locale.ENGLISH).mapping(new ConceptMapBuilder("b1c13504-4864-102e-96e9-000c29c2a5d7").type(sameAs).ensureTerm(pih, "17").build()).mapping(new ConceptMapBuilder("737fedbe-4943-102e-96e9-000c29c2a5d7").type(sameAs).ensureTerm(pih, "DIPTHERIA TETANUS BOOSTER").build()).build());
// how to handle "Others" for vaccinations
}