Examples with PatientIdSet org.openmrs.module.reporting.cohort.PatientIdSet used on opensource projects

Example 1 with PatientIdSet

use of org.openmrs.module.reporting.cohort.PatientIdSet in project openmrs-module-pihcore by PIH.

the class MultipleObsForEncounterDataEvaluatorTest method shouldCalculateSymptomPresentAndAbsent.

@Test
public void shouldCalculateSymptomPresentAndAbsent() throws Exception {
    EncounterBuilder eb = data.encounter();
    eb.patient(createPatient());
    eb.encounterDatetime(DateUtil.getDateTime(2015, 4, 15));
    eb.location(locationService.getLocation("CDI Klinik Ekstèn Jeneral"));
    eb.encounterType(getVitalsEncounterType());
    // We'll simulate "symptom present" by using the diagnosis concept, "symptom absent" with "reason for visit" concept
    Concept diagnosisConcept = Metadata.getConcept("PIH:DIAGNOSIS");
    Concept reasonForVisitConcept = Metadata.getConcept("Reason for HUM visit");
    Concept malariaConcept = Metadata.getConcept("PIH:MALARIA");
    Concept dengueConcept = Metadata.getConcept("PIH:Dengue");
    Concept typhoidConcept = Metadata.getConcept("PIH:TYPHOID FEVER");
    Concept tbConcept = Metadata.getConcept("PIH:TUBERCULOSIS");
    eb.obs(diagnosisConcept, malariaConcept);
    eb.obs(diagnosisConcept, dengueConcept);
    eb.obs(reasonForVisitConcept, typhoidConcept);
    Encounter enc = eb.save();
    EvaluationContext context = new EvaluationContext();
    context.setBaseCohort(new PatientIdSet(enc.getPatient().getPatientId()));
    EncounterDataSetDefinition dsd = new EncounterDataSetDefinition();
    addSymptomPresentOrAbsentColumn(dsd, "malaria", "PIH:DIAGNOSIS", "PIH:Reason for HUM Visit", "PIH:MALARIA", "Diagnosis", "Reason");
    addSymptomPresentOrAbsentColumn(dsd, "dengue", "PIH:DIAGNOSIS", "PIH:Reason for HUM Visit", "PIH:Dengue", "Diagnosis", "Reason");
    addSymptomPresentOrAbsentColumn(dsd, "typhoid", "PIH:DIAGNOSIS", "PIH:Reason for HUM Visit", "PIH:TYPHOID FEVER", "Diagnosis", "Reason");
    addSymptomPresentOrAbsentColumn(dsd, "tb", "PIH:DIAGNOSIS", "PIH:Reason for HUM Visit", "PIH:TUBERCULOSIS", "Diagnosis", "Reason");
    SimpleDataSet ds = (SimpleDataSet) dataSetDefinitionService.evaluate(dsd, context);
    DataSetRow row = ds.getRows().get(0);
    assertThat(row.getColumnValue("malaria"), is("Diagnosis"));
    assertThat(row.getColumnValue("dengue"), is("Diagnosis"));
    assertThat(row.getColumnValue("typhoid"), is("Reason"));
    assertNull(row.getColumnValue("tb"));
}