Examples with Resource org.openrdf.model.Resource used on opensource projects

Example 51 with Resource

use of org.openrdf.model.Resource in project vcell by virtualcell.

the class OntologyInfo method writeSuperClasses.

public static void writeSuperClasses(Graph graph, PrintStream out, Resource resource) {
    Iterator<Statement> iter = graph.match(resource, RDFS.SUBCLASSOF, null);
    Set<Resource> resources = new HashSet<Resource>();
    while (iter.hasNext()) {
        Value superClassNode = iter.next().getObject();
        if (superClassNode instanceof Resource) {
            resources.add((Resource) superClassNode);
        }
    }
    if (resources.size() > 0) {
        out.println("  Is sub class of: " + resourcesToString(resources));
    }
}

Example 52 with Resource

use of org.openrdf.model.Resource in project vcell by virtualcell.

the class OntSpecUtil method findMissingComment.

public static Set<Resource> findMissingComment(Graph schema) {
    Set<Resource> resources = new HashSet<Resource>();
    for (Statement statement : schema) {
        Resource subject = statement.getSubject();
        if (isMissingComment(schema, subject)) {
            resources.add(subject);
        }
        URI predicate = statement.getPredicate();
        if (isMissingComment(schema, predicate)) {
            resources.add(predicate);
        }
        ;
        Value object = statement.getObject();
        if (isMissingComment(schema, object)) {
            resources.add((Resource) object);
        }
    }
    return resources;
}

Example 53 with Resource

use of org.openrdf.model.Resource in project vcell by virtualcell.

the class Model2JDOM method addModel.

public void addModel(Graph model, String baseURI) {
    for (Statement statement : model) {
        Resource subject = statement.getSubject();
        Element elementS = addSubjectElement(model, subject, root);
        URI predicate = statement.getPredicate();
        Element elementP = createPredicateElement(predicate);
        Value object = statement.getObject();
        if (object instanceof Resource) {
            Resource objectR = (Resource) object;
            if (!isTypeSetAsName(elementS, subject, predicate, object)) {
                elementS.addContent(elementP);
                addObjectElement(model, objectR, elementP);
            }
        } else {
            elementS.addContent(elementP);
            Literal objectL = (Literal) object;
            elementP.addContent(new Text(objectL.stringValue()));
            URI dataTypeURI = objectL.getDatatype();
            if (dataTypeURI != null) {
                elementP.setAttribute("datatype", dataTypeURI.stringValue(), nsRDF);
            }
            String languageTag = objectL.getLanguage();
            if (languageTag != null) {
                elementP.setAttribute("lang", languageTag, Namespace.XML_NAMESPACE);
            }
        }
    }
}

Example 54 with Resource

use of org.openrdf.model.Resource in project vcell by virtualcell.

the class MIRIAMizer method newRefGroup.

public RefGroup newRefGroup(Graph graph, Resource resource, MIRIAMQualifier qualifier) {
    Resource bag = graph.getValueFactory().createBNode();
    graph.add(bag, RDF.TYPE, RDF.BAG);
    graph.add(resource, qualifier.getProperty(), bag);
    RefGroup group = new RefGroup(bag);
    return group;
}

Example 55 with Resource

use of org.openrdf.model.Resource in project vcell by virtualcell.

the class MIRIAMizer method getRefGroups.

public Set<RefGroup> getRefGroups(Graph graph, Resource resource, MIRIAMQualifier qualifier) {
    Set<RefGroup> groups = new HashSet<RefGroup>();
    Iterator<Statement> iter = graph.match(resource, qualifier.getProperty(), null);
    while (iter.hasNext()) {
        Statement statement = iter.next();
        Value node = statement.getObject();
        if (node instanceof Resource) {
            groups.add(new RefGroup((Resource) node));
        }
    }
    return groups;
}