Examples with Title org.orcid.jaxb.model.message.Title used on opensource projects

Example 26 with Title

use of org.orcid.jaxb.model.message.Title in project ORCID-Source by ORCID.

the class OrcidProfileManagerImplTest method testUpdatePersonalInformationRemovesOrcidIndexFields.

@Test
@Transactional
@Rollback(true)
public void testUpdatePersonalInformationRemovesOrcidIndexFields() throws Exception {
    // re-use the createFull method but add some extra criteria so we can
    // use our specific orcidAllSolrFieldsPopulatedForSave matcher
    OrcidProfile profile = createFullOrcidProfile();
    OtherNames otherNames = new OtherNames();
    otherNames.getOtherName().add(new OtherName("Stan", null));
    otherNames.getOtherName().add(new OtherName("Willis", null));
    profile.getOrcidBio().getPersonalDetails().setOtherNames(otherNames);
    OrcidWorks orcidWorks = new OrcidWorks();
    profile.setOrcidWorks(orcidWorks);
    WorkTitle singleWorkTitle = new WorkTitle();
    singleWorkTitle.setTitle(new Title("Single works"));
    singleWorkTitle.setSubtitle(new Subtitle("Single works"));
    OrcidWork orcidWork = createWork1(singleWorkTitle);
    // TODO JB some doi testing here?
    // orcidWork.getElectronicResourceNum().add(new
    // ElectronicResourceNum("10.1016/S0021-8502(00)90373-2",
    // ElectronicResourceNumType.DOI));
    orcidWorks.getOrcidWork().add(orcidWork);
    orcidProfileManager.createOrcidProfile(profile, false, false);
    // now negate all fields that form part of a solr query, leaving only
    // the orcid itself
    // we do this by passing through an orcid missing the fields from an
    // OrcidSolrDocument
    OrcidProfile negatedProfile = createBasicProfile();
    negatedProfile.getOrcidBio().getPersonalDetails().setFamilyName(null);
    negatedProfile.getOrcidBio().getPersonalDetails().setGivenNames(null);
    negatedProfile.getOrcidBio().getPersonalDetails().setCreditName(null);
    negatedProfile.getOrcidBio().getPersonalDetails().setOtherNames(null);
    negatedProfile.getOrcidActivities().setAffiliations(null);
    orcidProfileManager.updateOrcidBio(negatedProfile);
    assertEquals(IndexingStatus.PENDING, profileDao.find(TEST_ORCID).getIndexingStatus());
}

Example 27 with Title

use of org.orcid.jaxb.model.message.Title in project ORCID-Source by ORCID.

the class OrcidProfileManagerImplTest method testAddOrcidWorksWhenDefaultVisibilityIsLimited.

@Test
@Transactional
@Rollback(true)
public void testAddOrcidWorksWhenDefaultVisibilityIsLimited() {
    OrcidProfile profile1 = createBasicProfile();
    OrcidHistory history = new OrcidHistory();
    history.setSubmissionDate(new SubmissionDate(DateUtils.convertToXMLGregorianCalendar(new Date())));
    profile1.setOrcidHistory(history);
    history.setClaimed(new Claimed(true));
    profile1.getOrcidInternal().getPreferences().setActivitiesVisibilityDefault(new ActivitiesVisibilityDefault(Visibility.LIMITED));
    orcidProfileManager.createOrcidProfile(profile1, false, false);
    OrcidProfile profile2 = new OrcidProfile();
    profile2.setOrcidIdentifier(TEST_ORCID);
    OrcidWorks orcidWorks = new OrcidWorks();
    profile2.setOrcidWorks(orcidWorks);
    WorkTitle workTitle1 = new WorkTitle();
    workTitle1.setTitle(new Title("Another Title"));
    workTitle1.setSubtitle(new Subtitle("Journal of Cloud Spotting"));
    OrcidWork work1 = createWork1(workTitle1);
    Source source = new Source(TEST_ORCID);
    work1.setSource(source);
    orcidWorks.getOrcidWork().add(work1);
    WorkTitle workTitle2 = new WorkTitle();
    workTitle2.setTitle(new Title("New Title"));
    workTitle2.setSubtitle(new Subtitle("Another New subtitle"));
    OrcidWork work2 = createWork2(workTitle2);
    orcidWorks.getOrcidWork().add(work2);
    // Try to add a duplicate
    WorkTitle workTitle3 = new WorkTitle();
    workTitle3.setTitle(new Title("Further Title"));
    workTitle3.setSubtitle(new Subtitle("Further subtitle"));
    OrcidWork work3 = createWork3(workTitle3);
    work3.setVisibility(Visibility.LIMITED);
    orcidWorks.getOrcidWork().add(work3);
    orcidProfileManager.addOrcidWorks(profile2);
    OrcidProfile resultProfile = orcidProfileManager.retrieveOrcidProfile(TEST_ORCID);
    assertEquals("Will", resultProfile.getOrcidBio().getPersonalDetails().getGivenNames().getContent());
    List<OrcidWork> works = resultProfile.retrieveOrcidWorks().getOrcidWork();
    assertEquals(4, works.size());
    assertEquals("Another Title", works.get(0).getWorkTitle().getTitle().getContent());
    assertEquals("Journal of Cloud Spotting", works.get(0).getWorkTitle().getSubtitle().getContent());
    for (OrcidWork work : works) {
        if ("Test Title".equals(work.getWorkTitle().getTitle().getContent()))
            assertEquals(Visibility.PRIVATE, work.getVisibility());
        else
            assertEquals(Visibility.LIMITED, work.getVisibility());
    }
}

Example 28 with Title

use of org.orcid.jaxb.model.message.Title in project ORCID-Source by ORCID.

the class OrcidProfileManagerImplTest method getWorkInsideOrcidProfile.

private OrcidProfile getWorkInsideOrcidProfile(String defaultTitle, String orcid) {
    OrcidWork orcidWork = new OrcidWork();
    //Set title
    WorkTitle title = new WorkTitle();
    if (defaultTitle != null)
        title.setTitle(new Title(defaultTitle));
    else
        title.setTitle(new Title("Title"));
    orcidWork.setWorkTitle(title);
    //Set external identifiers
    WorkExternalIdentifier extId1 = new WorkExternalIdentifier();
    extId1.setWorkExternalIdentifierId(new WorkExternalIdentifierId("doi-" + defaultTitle));
    extId1.setWorkExternalIdentifierType(WorkExternalIdentifierType.DOI);
    WorkExternalIdentifier extId2 = new WorkExternalIdentifier();
    if (defaultTitle != null)
        extId2.setWorkExternalIdentifierId(new WorkExternalIdentifierId("issn-" + defaultTitle));
    else
        extId2.setWorkExternalIdentifierId(new WorkExternalIdentifierId("issn-" + System.currentTimeMillis()));
    extId2.setWorkExternalIdentifierType(WorkExternalIdentifierType.ISSN);
    WorkExternalIdentifiers extIds = new WorkExternalIdentifiers();
    extIds.getWorkExternalIdentifier().add(extId1);
    extIds.getWorkExternalIdentifier().add(extId2);
    orcidWork.setWorkExternalIdentifiers(extIds);
    orcidWork.setWorkType(WorkType.ARTISTIC_PERFORMANCE);
    OrcidProfile profile = new OrcidProfile();
    profile.setOrcidIdentifier(orcid);
    List<OrcidWork> workList = new ArrayList<OrcidWork>();
    workList.add(orcidWork);
    OrcidWorks orcidWorks = new OrcidWorks();
    orcidWorks.setOrcidWork(workList);
    profile.setOrcidWorks(orcidWorks);
    return profile;
}

Example 29 with Title

use of org.orcid.jaxb.model.message.Title in project ORCID-Source by ORCID.

the class OrcidProfileManagerImpl method checkWorkExternalIdentifiersAreNotDuplicated.

/**
     * Checks if the list of updated works contains any duplicated external
     * identifier, if so, it will throw an exception The newOrcidWorksList MUST
     * be deduped before getting into this method
     * 
     * @param updatedOrcidWorksList
     *            the deduped list of works
     * @throws IllegalArgumentException
     *             if there is a duplicated external identifier
     * */
public void checkWorkExternalIdentifiersAreNotDuplicated(List<OrcidWork> newOrcidWorksList, List<OrcidWork> existingWorkList) {
    // from the same source, so, we can skip the work source comparison
    if (newOrcidWorksList != null) {
        for (int i = 0; i < newOrcidWorksList.size(); i++) {
            OrcidWork newWork = newOrcidWorksList.get(i);
            for (int j = 0; j < newOrcidWorksList.size(); j++) {
                // If they are not the same work
                if (i != j) {
                    OrcidWork newWorkToCompare = newOrcidWorksList.get(j);
                    // If newWork have external identifiers
                    if (newWork.getWorkExternalIdentifiers() != null && newWork.getWorkExternalIdentifiers().getWorkExternalIdentifier() != null && !newWork.getWorkExternalIdentifiers().getWorkExternalIdentifier().isEmpty()) {
                        // For each external id on the outer work
                        for (WorkExternalIdentifier workExtId : newWork.getWorkExternalIdentifiers().getWorkExternalIdentifier()) {
                            if (newWorkToCompare.getWorkExternalIdentifiers() != null && newWorkToCompare.getWorkExternalIdentifiers().getWorkExternalIdentifier() != null && !newWorkToCompare.getWorkExternalIdentifiers().getWorkExternalIdentifier().isEmpty()) {
                                // the inner work
                                for (WorkExternalIdentifier workExtIdToCompare : newWorkToCompare.getWorkExternalIdentifiers().getWorkExternalIdentifier()) {
                                    // If the ext ids are the same
                                    if (workExtId.equals(workExtIdToCompare)) {
                                        Title title = (newWork.getWorkTitle() == null || newWork.getWorkTitle().getTitle() == null) ? null : newWork.getWorkTitle().getTitle();
                                        Title titleToCompare = (newWorkToCompare.getWorkTitle() == null || newWorkToCompare.getWorkTitle().getTitle() == null) ? null : newWorkToCompare.getWorkTitle().getTitle();
                                        if (!isTheSameTitle(title, titleToCompare) && !areBothExtIdsPartOf(newWork.getWorkType(), workExtId, workExtIdToCompare)) {
                                            String extIdContent = (workExtId.getWorkExternalIdentifierId() == null || PojoUtil.isEmpty(workExtId.getWorkExternalIdentifierId().getContent())) ? "" : workExtId.getWorkExternalIdentifierId().getContent();
                                            String title1 = (title == null) ? "" : title.getContent();
                                            String title2 = (titleToCompare == null) ? "" : titleToCompare.getContent();
                                            String errorMessage = String.format("Works \"%s\" and \"%s\" have the same external id \"%s\"", title1, title2, extIdContent);
                                            throw new IllegalArgumentException(errorMessage);
                                        }
                                    }
                                }
                            }
                        }
                    }
                }
            }
        }
    }
    // Then, if it already have works
    if (existingWorkList != null && existingWorkList.size() > 0) {
        // Check for duplicates in existing works, if any is found, log it
        for (int i = 0; i < existingWorkList.size(); i++) {
            OrcidWork existingWork = existingWorkList.get(i);
            Source workSource = existingWork.getSource();
            for (int j = 0; j < existingWorkList.size(); j++) {
                // If it is not the same index
                if (i != j) {
                    OrcidWork existingWorkToCompare = existingWorkList.get(j);
                    Source workSourceToCompare = existingWorkToCompare.getSource();
                    // If both works have the same source
                    if (isTheSameSource(workSource, workSourceToCompare)) {
                        // If the work have external identifiers
                        if (existingWork.getWorkExternalIdentifiers() != null && existingWork.getWorkExternalIdentifiers().getWorkExternalIdentifier() != null && !existingWork.getWorkExternalIdentifiers().getWorkExternalIdentifier().isEmpty()) {
                            // Compare each external identifier
                            for (WorkExternalIdentifier workExtId : existingWork.getWorkExternalIdentifiers().getWorkExternalIdentifier()) {
                                // If the workToCompare have ext ids
                                if (existingWorkToCompare.getWorkExternalIdentifiers() != null && existingWorkToCompare.getWorkExternalIdentifiers().getWorkExternalIdentifier() != null && !existingWorkToCompare.getWorkExternalIdentifiers().getWorkExternalIdentifier().isEmpty()) {
                                    // rules:
                                    for (WorkExternalIdentifier workToCompareExtId : existingWorkToCompare.getWorkExternalIdentifiers().getWorkExternalIdentifier()) {
                                        // If the ext ids are the same
                                        if (workExtId.equals(workToCompareExtId)) {
                                            // Compare the titles, if they
                                            // are different, set it as
                                            // duplicated
                                            Title title = (existingWork.getWorkTitle() == null || existingWork.getWorkTitle().getTitle() == null) ? null : existingWork.getWorkTitle().getTitle();
                                            Title titleToCompare = (existingWorkToCompare.getWorkTitle() == null || existingWorkToCompare.getWorkTitle().getTitle() == null) ? null : existingWorkToCompare.getWorkTitle().getTitle();
                                            if (!isTheSameTitle(title, titleToCompare)) {
                                                String extIdContent = (workExtId.getWorkExternalIdentifierId() == null || PojoUtil.isEmpty(workExtId.getWorkExternalIdentifierId().getContent())) ? "" : workExtId.getWorkExternalIdentifierId().getContent();
                                                LOG.error("Works {} and {} have the same external identifier {}", new Object[] { existingWork.getPutCode(), existingWorkToCompare.getPutCode(), extIdContent });
                                            }
                                        }
                                    }
                                }
                            }
                        }
                    }
                }
            }
        }
        // Check for duplicates between the existing works and the new works
        if (newOrcidWorksList != null) {
            for (OrcidWork orcidWork : newOrcidWorksList) {
                Source workSource = orcidWork.getSource();
                for (OrcidWork existingWork : existingWorkList) {
                    Source existingWorkSource = existingWork.getSource();
                    // If both works have the same source
                    if (isTheSameSource(workSource, existingWorkSource)) {
                        // If the new work have external identifiers
                        if (orcidWork.getWorkExternalIdentifiers() != null && orcidWork.getWorkExternalIdentifiers().getWorkExternalIdentifier() != null && !orcidWork.getWorkExternalIdentifiers().getWorkExternalIdentifier().isEmpty()) {
                            // For each external identifier in the new work
                            for (WorkExternalIdentifier newExternalIdentifier : orcidWork.getWorkExternalIdentifiers().getWorkExternalIdentifier()) {
                                if (existingWork.getWorkExternalIdentifiers() != null && existingWork.getWorkExternalIdentifiers().getWorkExternalIdentifier() != null && !existingWork.getWorkExternalIdentifiers().getWorkExternalIdentifier().isEmpty()) {
                                    // identifiers
                                    for (WorkExternalIdentifier existingExternalIdentifier : existingWork.getWorkExternalIdentifiers().getWorkExternalIdentifier()) {
                                        // If the ext ids are the same
                                        if (newExternalIdentifier.equals(existingExternalIdentifier)) {
                                            // Compare the titles, if they
                                            // are different, set it as
                                            // duplicated
                                            Title title = (orcidWork.getWorkTitle() == null || orcidWork.getWorkTitle().getTitle() == null) ? null : orcidWork.getWorkTitle().getTitle();
                                            Title titleToCompare = (existingWork.getWorkTitle() == null || existingWork.getWorkTitle().getTitle() == null) ? null : existingWork.getWorkTitle().getTitle();
                                            if (!isTheSameTitle(title, titleToCompare) && !areBothExtIdsPartOf(orcidWork.getWorkType(), existingExternalIdentifier, newExternalIdentifier)) {
                                                String extIdContent = (existingExternalIdentifier.getWorkExternalIdentifierId() == null || PojoUtil.isEmpty(existingExternalIdentifier.getWorkExternalIdentifierId().getContent())) ? "" : existingExternalIdentifier.getWorkExternalIdentifierId().getContent();
                                                String title1 = (title == null) ? "" : title.getContent();
                                                String title2 = (titleToCompare == null) ? "" : titleToCompare.getContent();
                                                String errorMessage = String.format("Works \"%s\" and \"%s\"(put-code '%s') have the same external id \"%s\"", title1, title2, existingWork.getPutCode(), extIdContent);
                                                throw new IllegalArgumentException(errorMessage);
                                            }
                                        }
                                    }
                                }
                            }
                        }
                    }
                }
            }
        }
    }
}