Examples with PeerReviews org.orcid.jaxb.model.record.summary_rc1.PeerReviews used on opensource projects

Example 21 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class PeerReviewManagerTest method testGroupPeerReviews_groupOnlyPublicPeerReviews2.

@Test
public void testGroupPeerReviews_groupOnlyPublicPeerReviews2() {
    PeerReviewSummary s1 = getPeerReviewSummary("public-peer-review-group-id-1", "ext-id-1", Visibility.PUBLIC);
    PeerReviewSummary s2 = getPeerReviewSummary("limited-peer-review-group-id-1", "ext-id-2", Visibility.LIMITED);
    PeerReviewSummary s3 = getPeerReviewSummary("private-peer-review-group-id-1", "ext-id-3", Visibility.PRIVATE);
    PeerReviewSummary s4 = getPeerReviewSummary("public-peer-review-group-id-1", "ext-id-4", Visibility.PUBLIC);
    PeerReviewSummary s5 = getPeerReviewSummary("limited-peer-review-group-id-1", "ext-id-5", Visibility.LIMITED);
    PeerReviewSummary s6 = getPeerReviewSummary("private-peer-review-group-id-1", "ext-id-6", Visibility.PRIVATE);
    PeerReviewSummary s7 = getPeerReviewSummary("public-peer-review-group-id-2", "ext-id-7", Visibility.PUBLIC);
    PeerReviewSummary s8 = getPeerReviewSummary("limited-peer-review-group-id-2", "ext-id-8", Visibility.LIMITED);
    PeerReviewSummary s9 = getPeerReviewSummary("private-peer-review-group-id-2", "ext-id-9", Visibility.PRIVATE);
    List<PeerReviewSummary> peerReviewList = Arrays.asList(s1, s2, s3, s4, s5, s6, s7, s8, s9);
    /**
         * They should be grouped as
         * 
         * Group 1: ext-id-1 + ext-id-4
         * Group 2: ext-id-7
         * */
    PeerReviews peerReviews = peerReviewManager.groupPeerReviews(peerReviewList, true);
    assertNotNull(peerReviews);
    assertEquals(2, peerReviews.getPeerReviewGroup().size());
    assertEquals(1, peerReviews.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("public-peer-review-group-id-1", peerReviews.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    assertEquals(2, peerReviews.getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertThat(peerReviews.getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getValue(), anyOf(is("ext-id-1"), is("ext-id-4")));
    assertThat(peerReviews.getPeerReviewGroup().get(0).getPeerReviewSummary().get(1).getExternalIdentifiers().getExternalIdentifier().get(0).getValue(), anyOf(is("ext-id-1"), is("ext-id-4")));
    assertEquals(1, peerReviews.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().size());
    assertEquals("public-peer-review-group-id-2", peerReviews.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().get(0).getValue());
    assertEquals(1, peerReviews.getPeerReviewGroup().get(1).getPeerReviewSummary().size());
    assertEquals("ext-id-7", peerReviews.getPeerReviewGroup().get(1).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getValue());
}

Example 22 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class PeerReviewManagerTest method testGroupPeerReviews.

@Test
public void testGroupPeerReviews() {
    /**
         * They should be grouped as
         * 
         * Group 1: ext-id-1 + ext-id-4
         * Group 2: ext-id-2 + ext-id-5
         * Group 3: ext-id-3 
         * Group 4: ext-id-6
         * */
    PeerReviewSummary s1 = getPeerReviewSummary("peer-review-group-id-1", "ext-id-1", Visibility.PUBLIC);
    PeerReviewSummary s2 = getPeerReviewSummary("peer-review-group-id-2", "ext-id-2", Visibility.LIMITED);
    PeerReviewSummary s3 = getPeerReviewSummary("peer-review-group-id-3", "ext-id-3", Visibility.PRIVATE);
    PeerReviewSummary s4 = getPeerReviewSummary("peer-review-group-id-1", "ext-id-4", Visibility.PRIVATE);
    PeerReviewSummary s5 = getPeerReviewSummary("peer-review-group-id-2", "ext-id-5", Visibility.PUBLIC);
    PeerReviewSummary s6 = getPeerReviewSummary("peer-review-group-id-4", "ext-id-6", Visibility.PRIVATE);
    List<PeerReviewSummary> peerReviewList1 = Arrays.asList(s1, s2, s3, s4, s5, s6);
    PeerReviews peerReviews1 = peerReviewManager.groupPeerReviews(peerReviewList1, false);
    assertNotNull(peerReviews1);
    assertEquals(4, peerReviews1.getPeerReviewGroup().size());
    //Group 1 have group1
    assertEquals(2, peerReviews1.getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-1", peerReviews1.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 2 have group2
    assertEquals(2, peerReviews1.getPeerReviewGroup().get(1).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-2", peerReviews1.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 3 have group3
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-3", peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 4 have group4
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-4", peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().get(0).getValue());
    PeerReviewSummary s7 = getPeerReviewSummary("peer-review-group-id-1", "ext-id-7", Visibility.PRIVATE);
    /**
         * Now, they should be grouped as
         * 
         * Group 1: ext-id-1 + ext-id-4 + ext-id-7
         * Group 2: ext-id-2 + ext-id-5
         * Group 3: ext-id-3 
         * Group 4: ext-id-6
         * */
    List<PeerReviewSummary> peerReviewList2 = Arrays.asList(s1, s2, s3, s4, s5, s6, s7);
    PeerReviews peerReviews2 = peerReviewManager.groupPeerReviews(peerReviewList2, false);
    assertNotNull(peerReviews2);
    assertEquals(4, peerReviews2.getPeerReviewGroup().size());
    //Group 1 have peer-review-group-id-1, so, it will now have 1 more
    assertEquals(3, peerReviews2.getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertEquals(1, peerReviews2.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-1", peerReviews2.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 2 have peer-review-group-id-2
    assertEquals(2, peerReviews2.getPeerReviewGroup().get(1).getPeerReviewSummary().size());
    assertEquals(1, peerReviews2.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-2", peerReviews2.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 3 have peer-review-group-id-3
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-3", peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 4 have peer-review-group-id-4
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-4", peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().get(0).getValue());
}

Example 23 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class MemberV2ApiServiceDelegatorImpl method viewPeerReviews.

@Override
public Response viewPeerReviews(String orcid) {
    List<PeerReviewSummary> peerReviewList = peerReviewManagerReadOnly.getPeerReviewSummaryList(orcid, getLastModifiedTime(orcid));
    // Lets copy the list so we don't modify the cached collection
    List<PeerReviewSummary> filteredList = null;
    if (peerReviewList != null) {
        filteredList = new ArrayList<PeerReviewSummary>(peerReviewList);
    }
    peerReviewList = filteredList;
    orcidSecurityManager.checkAndFilter(orcid, peerReviewList, ScopePathType.PEER_REVIEW_READ_LIMITED);
    PeerReviews peerReviews = peerReviewManager.groupPeerReviews(peerReviewList, false);
    ActivityUtils.setPathToPeerReviews(peerReviews, orcid);
    Api2_0_LastModifiedDatesHelper.calculateLastModified(peerReviews);
    sourceUtils.setSourceName(peerReviews);
    return Response.ok(peerReviews).build();
}

Example 24 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class ConvertVrc4ToV2Test method upgradePeerReviewsToVrc3Test.

@Test
public void upgradePeerReviewsToVrc3Test() throws JAXBException {
    JAXBContext jaxbContext1 = JAXBContext.newInstance(PeerReviews.class);
    JAXBContext jaxbContext2 = JAXBContext.newInstance(org.orcid.jaxb.model.record.summary_v2.PeerReviews.class);
    Unmarshaller jaxbUnmarshaller = jaxbContext1.createUnmarshaller();
    InputStream rc3Stream = ConvertVrc4ToV2Test.class.getClassLoader().getResourceAsStream("test-peer-reviews-2.0_rc4.xml");
    InputStream rc4Stream = ConvertVrc4ToV2Test.class.getClassLoader().getResourceAsStream("test-peer-reviews-2.0.xml");
    PeerReviews rc4PeerReviews = (PeerReviews) jaxbUnmarshaller.unmarshal(rc3Stream);
    jaxbUnmarshaller = jaxbContext2.createUnmarshaller();
    org.orcid.jaxb.model.record.summary_v2.PeerReviews rc4PeerReviews1 = (org.orcid.jaxb.model.record.summary_v2.PeerReviews) jaxbUnmarshaller.unmarshal(rc4Stream);
    V2Convertible result = versionConverterV2_0_rc4ToV2_0.upgrade(new V2Convertible(rc4PeerReviews, "v2_rc4"));
    org.orcid.jaxb.model.record.summary_v2.PeerReviews rc4PeerReviews2 = (org.orcid.jaxb.model.record.summary_v2.PeerReviews) result.getObjectToConvert();
    assertEquals(rc4PeerReviews1, rc4PeerReviews2);
}

Example 25 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class RecordTest method testViewRecordFromMemberAPI.

@Test
public void testViewRecordFromMemberAPI() throws InterruptedException, JSONException {
    String accessToken = getAccessToken();
    assertNotNull(accessToken);
    ClientResponse response = memberV2ApiClient.viewRecord(getUser1OrcidId(), accessToken);
    assertNotNull(response);
    assertEquals("invalid " + response, 200, response.getStatus());
    Record record = response.getEntity(Record.class);
    assertNotNull(record);
    assertNotNull(record.getOrcidIdentifier());
    assertEquals(getUser1OrcidId(), record.getOrcidIdentifier().getPath());
    //Check the visibility of every activity that exists
    if (record.getActivitiesSummary() != null) {
        //Educations
        if (record.getActivitiesSummary().getEducations() != null) {
            Educations e = record.getActivitiesSummary().getEducations();
            if (e.getSummaries() != null) {
                for (EducationSummary s : e.getSummaries()) {
                    assertNotNull(s.getSource());
                    assertNotNull(s.getVisibility());
                    Visibility v = s.getVisibility();
                    //If the visibility is PRIVATE the client should be the owner
                    if (Visibility.PRIVATE.equals(v)) {
                        assertEquals(getClient1ClientId(), s.getSource().retrieveSourcePath());
                    }
                }
            }
        }
        //Employments
        if (record.getActivitiesSummary().getEmployments() != null) {
            Employments e = record.getActivitiesSummary().getEmployments();
            if (e.getSummaries() != null) {
                for (EmploymentSummary s : e.getSummaries()) {
                    assertNotNull(s.getSource());
                    assertNotNull(s.getVisibility());
                    Visibility v = s.getVisibility();
                    //If the visibility is PRIVATE the client should be the owner
                    if (Visibility.PRIVATE.equals(v)) {
                        assertEquals(getClient1ClientId(), s.getSource().retrieveSourcePath());
                    }
                }
            }
        }
        //Fundings
        if (record.getActivitiesSummary().getFundings() != null) {
            Fundings f = record.getActivitiesSummary().getFundings();
            List<FundingGroup> groups = f.getFundingGroup();
            if (groups != null) {
                for (FundingGroup fGroup : groups) {
                    List<FundingSummary> summaries = fGroup.getFundingSummary();
                    if (summaries != null) {
                        for (FundingSummary s : summaries) {
                            assertNotNull(s.getSource());
                            assertNotNull(s.getVisibility());
                            Visibility v = s.getVisibility();
                            //If the visibility is PRIVATE the client should be the owner
                            if (Visibility.PRIVATE.equals(v)) {
                                assertEquals(getClient1ClientId(), s.getSource().retrieveSourcePath());
                            }
                        }
                    }
                }
            }
        }
        //PeerReviews
        if (record.getActivitiesSummary().getPeerReviews() != null) {
            PeerReviews p = record.getActivitiesSummary().getPeerReviews();
            List<PeerReviewGroup> groups = p.getPeerReviewGroup();
            if (groups != null) {
                for (PeerReviewGroup pGroup : groups) {
                    List<PeerReviewSummary> summaries = pGroup.getPeerReviewSummary();
                    if (summaries != null) {
                        for (PeerReviewSummary s : summaries) {
                            assertNotNull(s.getSource());
                            assertNotNull(s.getVisibility());
                            Visibility v = s.getVisibility();
                            //If the visibility is PRIVATE the client should be the owner
                            if (Visibility.PRIVATE.equals(v)) {
                                assertEquals(getClient1ClientId(), s.getSource().retrieveSourcePath());
                            }
                        }
                    }
                }
            }
        }
        //Works
        if (record.getActivitiesSummary().getWorks() != null) {
            Works w = record.getActivitiesSummary().getWorks();
            List<WorkGroup> groups = w.getWorkGroup();
            if (groups != null) {
                for (WorkGroup wGroup : groups) {
                    List<WorkSummary> summaries = wGroup.getWorkSummary();
                    if (summaries != null) {
                        for (WorkSummary s : summaries) {
                            assertNotNull(s.getSource());
                            assertNotNull(s.getVisibility());
                            Visibility v = s.getVisibility();
                            //If the visibility is PRIVATE the client should be the owner
                            if (Visibility.PRIVATE.equals(v)) {
                                assertEquals(getClient1ClientId(), s.getSource().retrieveSourcePath());
                            }
                        }
                    }
                }
            }
        }
    }
    //Check the visibility of every biography elements that exists
    if (record.getPerson() != null) {
        //Address
        if (record.getPerson().getAddresses() != null) {
            Addresses addresses = record.getPerson().getAddresses();
            List<Address> list = addresses.getAddress();
            if (list != null) {
                for (Address o : list) {
                    assertNotNull(o.getSource());
                    assertNotNull(o.getVisibility());
                    Visibility v = o.getVisibility();
                    //If the visibility is PRIVATE the client should be the owner
                    if (Visibility.PRIVATE.equals(v)) {
                        assertEquals(getClient1ClientId(), o.getSource().retrieveSourcePath());
                    }
                }
            }
        }
        //Biography
        if (record.getPerson().getBiography() != null) {
            Biography b = record.getPerson().getBiography();
            if (b != null) {
                assertNotNull(b.getVisibility());
                if (Visibility.PRIVATE.equals(b.getVisibility())) {
                    fail("Visibility is private");
                }
            }
        }
        //Emails
        if (record.getPerson().getEmails() != null) {
            Emails emails = record.getPerson().getEmails();
            List<Email> list = emails.getEmails();
            if (list != null) {
                for (Email e : list) {
                    assertNotNull(e.getVisibility());
                    if (Visibility.PRIVATE.equals(e.getVisibility())) {
                        fail("Email " + e.getEmail() + " is private");
                    }
                }
            }
        }
        //External identifiers
        if (record.getPerson().getExternalIdentifiers() != null) {
            PersonExternalIdentifiers extIds = record.getPerson().getExternalIdentifiers();
            List<PersonExternalIdentifier> list = extIds.getExternalIdentifiers();
            if (list != null) {
                for (PersonExternalIdentifier e : list) {
                    assertNotNull(e.getVisibility());
                    if (Visibility.PRIVATE.equals(e.getVisibility())) {
                        assertEquals(getClient1ClientId(), e.getSource().retrieveSourcePath());
                    }
                }
            }
        }
        //Keywords
        if (record.getPerson().getKeywords() != null) {
            Keywords keywords = record.getPerson().getKeywords();
            List<Keyword> list = keywords.getKeywords();
            if (list != null) {
                for (Keyword e : list) {
                    assertNotNull(e.getVisibility());
                    if (Visibility.PRIVATE.equals(e.getVisibility())) {
                        assertEquals(getClient1ClientId(), e.getSource().retrieveSourcePath());
                    }
                }
            }
        }
        //Name
        if (record.getPerson().getName() != null) {
            Name name = record.getPerson().getName();
            if (Visibility.PRIVATE.equals(name.getVisibility())) {
                fail("Name is private");
            }
        }
        //Other names
        if (record.getPerson().getOtherNames() != null) {
            OtherNames otherNames = record.getPerson().getOtherNames();
            List<OtherName> list = otherNames.getOtherNames();
            if (list != null) {
                for (OtherName e : list) {
                    assertNotNull(e.getVisibility());
                    if (Visibility.PRIVATE.equals(e.getVisibility())) {
                        assertEquals(getClient1ClientId(), e.getSource().retrieveSourcePath());
                    }
                }
            }
        }
        //Researcher urls
        if (record.getPerson().getResearcherUrls() != null) {
            ResearcherUrls rUrls = record.getPerson().getResearcherUrls();
            List<ResearcherUrl> list = rUrls.getResearcherUrls();
            if (list != null) {
                for (ResearcherUrl e : list) {
                    assertNotNull(e.getVisibility());
                    if (Visibility.PRIVATE.equals(e.getVisibility())) {
                        assertEquals(getClient1ClientId(), e.getSource().retrieveSourcePath());
                    }
                }
            }
        }
    }
}