Examples with PeerReviews org.orcid.jaxb.model.record.summary_rc1.PeerReviews used on opensource projects

Example 1 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class PeerReviewManagerReadOnlyImpl method groupPeerReviews.

/**
     * Generate a grouped list of peer reviews with the given list of peer reviews
     * 
     * @param peerReviews
     *          The list of peer reviews to group
     * @param justPublic
     *          Specify if we want to group only the public elements in the given list
     * @return PeerReviews element with the PeerReviewSummary elements grouped                  
     * */
@Override
public PeerReviews groupPeerReviews(List<PeerReviewSummary> peerReviews, boolean justPublic) {
    ActivitiesGroupGenerator groupGenerator = new ActivitiesGroupGenerator();
    PeerReviews result = new PeerReviews();
    for (PeerReviewSummary peerReview : peerReviews) {
        if (justPublic && !peerReview.getVisibility().equals(org.orcid.jaxb.model.common_v2.Visibility.PUBLIC)) {
        // If it is just public and the funding is not public, just
        // ignore it
        } else {
            groupGenerator.group(peerReview);
        }
    }
    List<ActivitiesGroup> groups = groupGenerator.getGroups();
    for (ActivitiesGroup group : groups) {
        Set<GroupAble> groupKeys = group.getGroupKeys();
        Set<GroupableActivity> activities = group.getActivities();
        PeerReviewGroup peerReviewGroup = new PeerReviewGroup();
        // Fill the peer review groups with the external identifiers
        if (groupKeys == null || groupKeys.isEmpty()) {
            // Initialize the ids as an empty list
            peerReviewGroup.getIdentifiers().getExternalIdentifier();
        } else {
            for (GroupAble groupKey : groupKeys) {
                PeerReviewGroupKey key = (PeerReviewGroupKey) groupKey;
                ExternalID id = new ExternalID();
                //TODO: this is not nice
                id.setType(PeerReviewGroupKey.KEY_NAME);
                id.setValue(key.getGroupId());
                peerReviewGroup.getIdentifiers().getExternalIdentifier().add(id);
            }
        }
        // Fill the peer review group with the list of activities
        for (GroupableActivity activity : activities) {
            PeerReviewSummary peerReviewSummary = (PeerReviewSummary) activity;
            peerReviewGroup.getPeerReviewSummary().add(peerReviewSummary);
        }
        // Sort the peer reviews
        Collections.sort(peerReviewGroup.getPeerReviewSummary(), new GroupableActivityComparator());
        result.getPeerReviewGroup().add(peerReviewGroup);
    }
    return result;
}

Example 2 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class RecordTest method testViewRecordFromPublicAPI.

@Test
public void testViewRecordFromPublicAPI() {
    ClientResponse response = publicV2ApiClient.viewRecordXML(getUser1OrcidId());
    assertNotNull(response);
    assertEquals("invalid " + response, 200, response.getStatus());
    Record record = response.getEntity(Record.class);
    assertNotNull(record);
    assertNotNull(record.getOrcidIdentifier());
    assertEquals(getUser1OrcidId(), record.getOrcidIdentifier().getPath());
    //Check the visibility of every activity that exists
    if (record.getActivitiesSummary() != null) {
        if (record.getActivitiesSummary() != null) {
            //Educations
            if (record.getActivitiesSummary().getEducations() != null) {
                Educations e = record.getActivitiesSummary().getEducations();
                if (e.getSummaries() != null) {
                    for (EducationSummary s : e.getSummaries()) {
                        assertNotNull(s.getSource());
                        assertEquals(Visibility.PUBLIC, s.getVisibility());
                    }
                }
            }
            //Employments
            if (record.getActivitiesSummary().getEmployments() != null) {
                Employments e = record.getActivitiesSummary().getEmployments();
                if (e.getSummaries() != null) {
                    for (EmploymentSummary s : e.getSummaries()) {
                        assertNotNull(s.getSource());
                        assertEquals(Visibility.PUBLIC, s.getVisibility());
                    }
                }
            }
            //Fundings
            if (record.getActivitiesSummary().getFundings() != null) {
                Fundings f = record.getActivitiesSummary().getFundings();
                List<FundingGroup> groups = f.getFundingGroup();
                if (groups != null) {
                    for (FundingGroup fGroup : groups) {
                        List<FundingSummary> summaries = fGroup.getFundingSummary();
                        if (summaries != null) {
                            for (FundingSummary s : summaries) {
                                assertNotNull(s.getSource());
                                assertEquals(Visibility.PUBLIC, s.getVisibility());
                            }
                        }
                    }
                }
            }
            //PeerReviews
            if (record.getActivitiesSummary().getPeerReviews() != null) {
                PeerReviews p = record.getActivitiesSummary().getPeerReviews();
                List<PeerReviewGroup> groups = p.getPeerReviewGroup();
                if (groups != null) {
                    for (PeerReviewGroup pGroup : groups) {
                        List<PeerReviewSummary> summaries = pGroup.getPeerReviewSummary();
                        if (summaries != null) {
                            for (PeerReviewSummary s : summaries) {
                                assertNotNull(s.getSource());
                                assertEquals(Visibility.PUBLIC, s.getVisibility());
                            }
                        }
                    }
                }
            }
            //Works
            if (record.getActivitiesSummary().getWorks() != null) {
                Works w = record.getActivitiesSummary().getWorks();
                List<WorkGroup> groups = w.getWorkGroup();
                if (groups != null) {
                    for (WorkGroup wGroup : groups) {
                        List<WorkSummary> summaries = wGroup.getWorkSummary();
                        if (summaries != null) {
                            for (WorkSummary s : summaries) {
                                assertNotNull(s.getSource());
                                assertEquals(Visibility.PUBLIC, s.getVisibility());
                            }
                        }
                    }
                }
            }
        }
    }
    //Check the visibility of every biography elements that exists
    if (record.getPerson() != null) {
        //Address
        if (record.getPerson().getAddresses() != null) {
            Addresses addresses = record.getPerson().getAddresses();
            List<Address> list = addresses.getAddress();
            if (list != null) {
                for (Address o : list) {
                    assertNotNull(o.getSource());
                    assertEquals(Visibility.PUBLIC, o.getVisibility());
                }
            }
        }
        //Biography
        if (record.getPerson().getBiography() != null) {
            Biography b = record.getPerson().getBiography();
            if (b != null) {
                assertNotNull(b.getVisibility());
                assertEquals(Visibility.PUBLIC, b.getVisibility());
            }
        }
        //Emails
        if (record.getPerson().getEmails() != null) {
            Emails emails = record.getPerson().getEmails();
            List<Email> list = emails.getEmails();
            if (list != null) {
                for (Email e : list) {
                    assertNotNull(e.getVisibility());
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
        //External identifiers
        if (record.getPerson().getExternalIdentifiers() != null) {
            PersonExternalIdentifiers extIds = record.getPerson().getExternalIdentifiers();
            List<PersonExternalIdentifier> list = extIds.getExternalIdentifiers();
            if (list != null) {
                for (PersonExternalIdentifier e : list) {
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
        //Keywords
        if (record.getPerson().getKeywords() != null) {
            Keywords keywords = record.getPerson().getKeywords();
            List<Keyword> list = keywords.getKeywords();
            if (list != null) {
                for (Keyword e : list) {
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
        //Name
        if (record.getPerson().getName() != null) {
            Name name = record.getPerson().getName();
            assertEquals(Visibility.PUBLIC, name.getVisibility());
        }
        //Other names
        if (record.getPerson().getOtherNames() != null) {
            OtherNames otherNames = record.getPerson().getOtherNames();
            List<OtherName> list = otherNames.getOtherNames();
            if (list != null) {
                for (OtherName e : list) {
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
        //Researcher urls
        if (record.getPerson().getResearcherUrls() != null) {
            ResearcherUrls rUrls = record.getPerson().getResearcherUrls();
            List<ResearcherUrl> list = rUrls.getResearcherUrls();
            if (list != null) {
                for (ResearcherUrl e : list) {
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
    }
}

Example 3 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class RecordTest method testViewRecordFromPublicAPI.

@Test
public void testViewRecordFromPublicAPI() {
    ClientResponse response = publicV2ApiClient.viewRecordXML(getUser1OrcidId());
    assertNotNull(response);
    assertEquals("invalid " + response, 200, response.getStatus());
    Record record = response.getEntity(Record.class);
    assertNotNull(record);
    assertNotNull(record.getOrcidIdentifier());
    assertEquals(getUser1OrcidId(), record.getOrcidIdentifier().getPath());
    //Check the visibility of every activity that exists
    if (record.getActivitiesSummary() != null) {
        if (record.getActivitiesSummary() != null) {
            //Educations
            if (record.getActivitiesSummary().getEducations() != null) {
                Educations e = record.getActivitiesSummary().getEducations();
                if (e.getSummaries() != null) {
                    for (EducationSummary s : e.getSummaries()) {
                        assertNotNull(s.getSource());
                        assertEquals(Visibility.PUBLIC, s.getVisibility());
                    }
                }
            }
            //Employments
            if (record.getActivitiesSummary().getEmployments() != null) {
                Employments e = record.getActivitiesSummary().getEmployments();
                if (e.getSummaries() != null) {
                    for (EmploymentSummary s : e.getSummaries()) {
                        assertNotNull(s.getSource());
                        assertEquals(Visibility.PUBLIC, s.getVisibility());
                    }
                }
            }
            //Fundings
            if (record.getActivitiesSummary().getFundings() != null) {
                Fundings f = record.getActivitiesSummary().getFundings();
                List<FundingGroup> groups = f.getFundingGroup();
                if (groups != null) {
                    for (FundingGroup fGroup : groups) {
                        List<FundingSummary> summaries = fGroup.getFundingSummary();
                        if (summaries != null) {
                            for (FundingSummary s : summaries) {
                                assertNotNull(s.getSource());
                                assertEquals(Visibility.PUBLIC, s.getVisibility());
                            }
                        }
                    }
                }
            }
            //PeerReviews
            if (record.getActivitiesSummary().getPeerReviews() != null) {
                PeerReviews p = record.getActivitiesSummary().getPeerReviews();
                List<PeerReviewGroup> groups = p.getPeerReviewGroup();
                if (groups != null) {
                    for (PeerReviewGroup pGroup : groups) {
                        List<PeerReviewSummary> summaries = pGroup.getPeerReviewSummary();
                        if (summaries != null) {
                            for (PeerReviewSummary s : summaries) {
                                assertNotNull(s.getSource());
                                assertEquals(Visibility.PUBLIC, s.getVisibility());
                            }
                        }
                    }
                }
            }
            //Works
            if (record.getActivitiesSummary().getWorks() != null) {
                Works w = record.getActivitiesSummary().getWorks();
                List<WorkGroup> groups = w.getWorkGroup();
                if (groups != null) {
                    for (WorkGroup wGroup : groups) {
                        List<WorkSummary> summaries = wGroup.getWorkSummary();
                        if (summaries != null) {
                            for (WorkSummary s : summaries) {
                                assertNotNull(s.getSource());
                                assertEquals(Visibility.PUBLIC, s.getVisibility());
                            }
                        }
                    }
                }
            }
        }
    }
    //Check the visibility of every biography elements that exists
    if (record.getPerson() != null) {
        //Address
        if (record.getPerson().getAddresses() != null) {
            Addresses addresses = record.getPerson().getAddresses();
            List<Address> list = addresses.getAddress();
            if (list != null) {
                for (Address o : list) {
                    assertNotNull(o.getSource());
                    assertEquals(Visibility.PUBLIC, o.getVisibility());
                }
            }
        }
        //Biography
        if (record.getPerson().getBiography() != null) {
            Biography b = record.getPerson().getBiography();
            if (b != null) {
                assertNotNull(b.getVisibility());
                assertEquals(Visibility.PUBLIC, b.getVisibility());
            }
        }
        //Emails
        if (record.getPerson().getEmails() != null) {
            Emails emails = record.getPerson().getEmails();
            List<Email> list = emails.getEmails();
            if (list != null) {
                for (Email e : list) {
                    assertNotNull(e.getVisibility());
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
        //External identifiers
        if (record.getPerson().getExternalIdentifiers() != null) {
            PersonExternalIdentifiers extIds = record.getPerson().getExternalIdentifiers();
            List<PersonExternalIdentifier> list = extIds.getExternalIdentifiers();
            if (list != null) {
                for (PersonExternalIdentifier e : list) {
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
        //Keywords
        if (record.getPerson().getKeywords() != null) {
            Keywords keywords = record.getPerson().getKeywords();
            List<Keyword> list = keywords.getKeywords();
            if (list != null) {
                for (Keyword e : list) {
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
        //Name
        if (record.getPerson().getName() != null) {
            Name name = record.getPerson().getName();
            assertEquals(Visibility.PUBLIC, name.getVisibility());
        }
        //Other names
        if (record.getPerson().getOtherNames() != null) {
            OtherNames otherNames = record.getPerson().getOtherNames();
            List<OtherName> list = otherNames.getOtherNames();
            if (list != null) {
                for (OtherName e : list) {
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
        //Researcher urls
        if (record.getPerson().getResearcherUrls() != null) {
            ResearcherUrls rUrls = record.getPerson().getResearcherUrls();
            List<ResearcherUrl> list = rUrls.getResearcherUrls();
            if (list != null) {
                for (ResearcherUrl e : list) {
                    assertEquals(Visibility.PUBLIC, e.getVisibility());
                }
            }
        }
    }
}

Example 4 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class PublicV2ApiServiceDelegatorImpl method viewPeerReviews.

@Override
public Response viewPeerReviews(String orcid) {
    List<PeerReviewSummary> peerReviews = peerReviewManagerReadOnly.getPeerReviewSummaryList(orcid, getLastModifiedTime(orcid));
    PeerReviews publicPeerReviews = peerReviewManagerReadOnly.groupPeerReviews(peerReviews, true);
    publicAPISecurityManagerV2.filter(publicPeerReviews);
    ActivityUtils.setPathToPeerReviews(publicPeerReviews, orcid);
    Api2_0_LastModifiedDatesHelper.calculateLastModified(publicPeerReviews);
    sourceUtilsReadOnly.setSourceName(publicPeerReviews);
    return Response.ok(publicPeerReviews).build();
}

Example 5 with PeerReviews

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviews in project ORCID-Source by ORCID.

the class MemberV2ApiServiceDelegator_PeerReviewsTest method testViewPeerReviews.

@Test
public void testViewPeerReviews() {
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    Response r = serviceDelegator.viewPeerReviews(ORCID);
    assertNotNull(r);
    PeerReviews peerReviews = (PeerReviews) r.getEntity();
    assertNotNull(peerReviews);
    assertEquals("/0000-0000-0000-0003/peer-reviews", peerReviews.getPath());
    Utils.verifyLastModified(peerReviews.getLastModifiedDate());
    assertNotNull(peerReviews.getPeerReviewGroup());
    assertEquals(4, peerReviews.getPeerReviewGroup().size());
    boolean found1 = false, found2 = false, found3 = false, found4 = false;
    for (PeerReviewGroup group : peerReviews.getPeerReviewGroup()) {
        Utils.verifyLastModified(group.getLastModifiedDate());
        assertNotNull(group.getIdentifiers());
        assertNotNull(group.getIdentifiers().getExternalIdentifier());
        assertEquals(1, group.getIdentifiers().getExternalIdentifier().size());
        assertNotNull(group.getPeerReviewSummary());
        assertEquals(1, group.getPeerReviewSummary().size());
        PeerReviewSummary summary = group.getPeerReviewSummary().get(0);
        Utils.verifyLastModified(summary.getLastModifiedDate());
        switch(group.getIdentifiers().getExternalIdentifier().get(0).getValue()) {
            case "issn:0000009":
                assertEquals("issn:0000009", summary.getGroupId());
                assertEquals(Long.valueOf(9), summary.getPutCode());
                found1 = true;
                break;
            case "issn:0000010":
                assertEquals("issn:0000010", summary.getGroupId());
                assertEquals(Long.valueOf(10), summary.getPutCode());
                found2 = true;
                break;
            case "issn:0000011":
                assertEquals("issn:0000011", summary.getGroupId());
                assertEquals(Long.valueOf(11), summary.getPutCode());
                found3 = true;
                break;
            case "issn:0000012":
                assertEquals("issn:0000012", summary.getGroupId());
                assertEquals(Long.valueOf(12), summary.getPutCode());
                found4 = true;
                break;
            default:
                fail("Invalid group id found: " + group.getIdentifiers().getExternalIdentifier().get(0).getValue());
                break;
        }
    }
    assertTrue(found1);
    assertTrue(found2);
    assertTrue(found3);
    assertTrue(found4);
}