Examples with PeerReview org.orcid.jaxb.model.v3.dev1.record.PeerReview used on opensource projects

Example 56 with PeerReview

use of org.orcid.jaxb.model.v3.dev1.record.PeerReview in project ORCID-Source by ORCID.

the class GetMyDataControllerTest method testDownload.

@Test
public void testDownload() throws JAXBException, IOException {
    SecurityContextHolder.getContext().setAuthentication(getAuthentication());
    MockHttpServletResponse response = new MockHttpServletResponse();
    getMyDataController.getMyData(response);
    byte[] content = response.getContentAsByteArray();
    ByteArrayInputStream is = new ByteArrayInputStream(content);
    ZipInputStream zip = new ZipInputStream(is);
    ZipEntry zipEntry = zip.getNextEntry();
    JAXBContext jaxbContext1 = JAXBContext.newInstance(Person.class, Distinction.class, Education.class, Employment.class, InvitedPosition.class, Membership.class, Qualification.class, Service.class, Funding.class, PeerReview.class, Work.class);
    Unmarshaller u = jaxbContext1.createUnmarshaller();
    boolean personFound = false;
    boolean distinctionFound = false;
    boolean educationFound = false;
    boolean employmentFound = false;
    boolean invitedPositionFound = false;
    boolean membershipFound = false;
    boolean qualificationFound = false;
    boolean serviceFound = false;
    boolean fundingFound = false;
    boolean peerReviewFound = false;
    boolean workFound = false;
    while (zipEntry != null) {
        String fileName = zipEntry.getName();
        byte[] buffer = new byte[1024];
        ByteArrayOutputStream out = new ByteArrayOutputStream();
        int len;
        while ((len = zip.read(buffer)) > 0) {
            out.write(buffer, 0, len);
        }
        ByteArrayInputStream in = new ByteArrayInputStream(out.toByteArray());
        if (fileName.equals("person.xml")) {
            Person x = (Person) u.unmarshal(in);
            assertNotNull(x);
            assertEquals("Biography", x.getBiography().getContent());
            assertEquals(Visibility.LIMITED, x.getBiography().getVisibility());
            personFound = true;
        } else if (fileName.startsWith("affiliations/distinctions")) {
            assertEquals("affiliations/distinctions/1.xml", fileName);
            Distinction x = (Distinction) u.unmarshal(in);
            assertNotNull(x);
            assertEquals("distinction", x.getDepartmentName());
            assertEquals(Long.valueOf(1), x.getPutCode());
            validateOrg(x);
            distinctionFound = true;
        } else if (fileName.startsWith("affiliations/educations")) {
            assertEquals("affiliations/educations/2.xml", fileName);
            Education x = (Education) u.unmarshal(in);
            assertNotNull(x);
            assertEquals("education", x.getDepartmentName());
            assertEquals(Long.valueOf(2), x.getPutCode());
            validateOrg(x);
            educationFound = true;
        } else if (fileName.startsWith("affiliations/employments")) {
            assertEquals("affiliations/employments/3.xml", fileName);
            Employment x = (Employment) u.unmarshal(in);
            assertNotNull(x);
            assertEquals("employment", x.getDepartmentName());
            assertEquals(Long.valueOf(3), x.getPutCode());
            validateOrg(x);
            employmentFound = true;
        } else if (fileName.startsWith("affiliations/invited_positions")) {
            assertEquals("affiliations/invited_positions/4.xml", fileName);
            InvitedPosition x = (InvitedPosition) u.unmarshal(in);
            assertNotNull(x);
            assertEquals("invited position", x.getDepartmentName());
            assertEquals(Long.valueOf(4), x.getPutCode());
            validateOrg(x);
            invitedPositionFound = true;
        } else if (fileName.startsWith("affiliations/memberships")) {
            assertEquals("affiliations/memberships/5.xml", fileName);
            Membership x = (Membership) u.unmarshal(in);
            assertNotNull(x);
            assertEquals("membership", x.getDepartmentName());
            assertEquals(Long.valueOf(5), x.getPutCode());
            validateOrg(x);
            membershipFound = true;
        } else if (fileName.startsWith("affiliations/qualifications")) {
            assertEquals("affiliations/qualifications/6.xml", fileName);
            Qualification x = (Qualification) u.unmarshal(in);
            assertNotNull(x);
            assertEquals("qualification", x.getDepartmentName());
            assertEquals(Long.valueOf(6), x.getPutCode());
            validateOrg(x);
            qualificationFound = true;
        } else if (fileName.startsWith("affiliations/services")) {
            assertEquals("affiliations/services/7.xml", fileName);
            Service x = (Service) u.unmarshal(in);
            assertNotNull(x);
            assertEquals("service", x.getDepartmentName());
            assertEquals(Long.valueOf(7), x.getPutCode());
            validateOrg(x);
            serviceFound = true;
        } else if (fileName.startsWith("fundings")) {
            assertEquals("fundings/1.xml", fileName);
            Funding x = (Funding) u.unmarshal(in);
            assertNotNull(x);
            assertEquals("title", x.getTitle().getTitle().getContent());
            assertEquals("1000", x.getAmount().getContent());
            assertEquals("$", x.getAmount().getCurrencyCode());
            assertEquals(Long.valueOf(1), x.getPutCode());
            validateOrg(x);
            fundingFound = true;
        } else if (fileName.startsWith("peer_reviews")) {
            assertEquals("peer_reviews/1.xml", fileName);
            PeerReview x = (PeerReview) u.unmarshal(in);
            assertNotNull(x);
            validateOrg(x);
            assertEquals(Long.valueOf(1), x.getPutCode());
            peerReviewFound = true;
        } else if (fileName.startsWith("works")) {
            assertEquals("works/1.xml", fileName);
            Work x = (Work) u.unmarshal(in);
            assertNotNull(x);
            assertEquals(Long.valueOf(1), x.getPutCode());
            workFound = true;
        }
        zipEntry = zip.getNextEntry();
    }
    assertTrue(personFound);
    assertTrue(distinctionFound);
    assertTrue(educationFound);
    assertTrue(employmentFound);
    assertTrue(invitedPositionFound);
    assertTrue(membershipFound);
    assertTrue(qualificationFound);
    assertTrue(serviceFound);
    assertTrue(fundingFound);
    assertTrue(peerReviewFound);
    assertTrue(workFound);
    zip.closeEntry();
    zip.close();
}

Example 57 with PeerReview

use of org.orcid.jaxb.model.v3.dev1.record.PeerReview in project ORCID-Source by ORCID.

the class PeerReviewsController method addPeerReview.

private PeerReviewForm addPeerReview(PeerReviewForm peerReviewForm) {
    String userOrcid = getEffectiveUserOrcid();
    PeerReview peerReview = peerReviewForm.toPeerReview();
    peerReview = peerReviewManager.createPeerReview(userOrcid, peerReview, false);
    peerReviewForm = PeerReviewForm.valueOf(peerReview);
    return peerReviewForm;
}

Example 58 with PeerReview

use of org.orcid.jaxb.model.v3.dev1.record.PeerReview in project ORCID-Source by ORCID.

the class OrcidInfo method getPeerReviewsJson.

@RequestMapping(value = "/{orcid:(?:\\d{4}-){3,}\\d{3}[\\dX]}/peer-reviews.json")
@ResponseBody
public List<PeerReviewForm> getPeerReviewsJson(HttpServletRequest request, @PathVariable("orcid") String orcid, @RequestParam(value = "peerReviewIds") String peerReviewIdsStr) {
    Map<String, String> languages = lm.buildLanguageMap(localeManager.getLocale(), false);
    List<PeerReviewForm> peerReviews = new ArrayList<PeerReviewForm>();
    Map<Long, PeerReview> peerReviewMap = activityManager.pubPeerReviewsMap(orcid);
    String[] peerReviewIds = peerReviewIdsStr.split(",");
    for (String id : peerReviewIds) {
        PeerReview peerReview = peerReviewMap.get(Long.valueOf(id));
        validateVisibility(peerReview.getVisibility());
        sourceUtils.setSourceName(peerReview);
        PeerReviewForm form = PeerReviewForm.valueOf(peerReview);
        // Set language name
        form.setCountryForDisplay(getMessage(buildInternationalizationKey(CountryIsoEntity.class, peerReview.getOrganization().getAddress().getCountry().name())));
        if (!PojoUtil.isEmpty(form.getTranslatedSubjectName())) {
            // Set translated title language name
            if (!StringUtils.isEmpty(form.getTranslatedSubjectName().getLanguageCode())) {
                String languageName = languages.get(form.getTranslatedSubjectName().getLanguageCode());
                form.getTranslatedSubjectName().setLanguageName(languageName);
            }
        }
        // the group id
        if (form.getGroupId() != null && !PojoUtil.isEmpty(form.getGroupId().getValue())) {
            GroupIdRecord groupId = groupIdRecordManager.findByGroupId(form.getGroupId().getValue()).get();
            form.setGroupIdPutCode(Text.valueOf(groupId.getPutCode()));
        }
        peerReviews.add(form);
    }
    return peerReviews;
}

Example 59 with PeerReview

use of org.orcid.jaxb.model.v3.dev1.record.PeerReview in project ORCID-Source by ORCID.

the class MapperFacadeFactory method getPeerReviewMapperFacade.

public MapperFacade getPeerReviewMapperFacade() {
    MapperFactory mapperFactory = new DefaultMapperFactory.Builder().build();
    ConverterFactory converterFactory = mapperFactory.getConverterFactory();
    converterFactory.registerConverter("workExternalIdentifiersConverterId", new JSONWorkExternalIdentifiersConverterV3(norm, localeManager));
    converterFactory.registerConverter("workExternalIdentifierConverterId", new JSONPeerReviewWorkExternalIdentifierConverterV3());
    // do same as work
    ClassMapBuilder<PeerReview, PeerReviewEntity> classMap = mapperFactory.classMap(PeerReview.class, PeerReviewEntity.class);
    addV3CommonFields(classMap);
    registerSourceConverters(mapperFactory, classMap);
    classMap.field("url.value", "url");
    classMap.field("organization.name", "org.name");
    classMap.field("organization.address.city", "org.city");
    classMap.field("organization.address.region", "org.region");
    classMap.field("organization.address.country", "org.country");
    classMap.field("organization.disambiguatedOrganization.disambiguatedOrganizationIdentifier", "org.orgDisambiguated.sourceId");
    classMap.field("organization.disambiguatedOrganization.disambiguationSource", "org.orgDisambiguated.sourceType");
    classMap.field("groupId", "groupId");
    classMap.field("subjectType", "subjectType");
    classMap.field("subjectUrl.value", "subjectUrl");
    classMap.field("subjectName.title.content", "subjectName");
    classMap.field("subjectName.translatedTitle.content", "subjectTranslatedName");
    classMap.field("subjectName.translatedTitle.languageCode", "subjectTranslatedNameLanguageCode");
    classMap.field("subjectContainerName.content", "subjectContainerName");
    classMap.fieldMap("externalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    classMap.fieldMap("subjectExternalIdentifier", "subjectExternalIdentifiersJson").converter("workExternalIdentifierConverterId").add();
    classMap.register();
    ClassMapBuilder<PeerReviewSummary, PeerReviewEntity> peerReviewSummaryClassMap = mapperFactory.classMap(PeerReviewSummary.class, PeerReviewEntity.class);
    addV3CommonFields(peerReviewSummaryClassMap);
    registerSourceConverters(mapperFactory, peerReviewSummaryClassMap);
    peerReviewSummaryClassMap.fieldMap("externalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    peerReviewSummaryClassMap.field("organization.name", "org.name");
    peerReviewSummaryClassMap.field("organization.address.city", "org.city");
    peerReviewSummaryClassMap.field("organization.address.region", "org.region");
    peerReviewSummaryClassMap.field("organization.address.country", "org.country");
    peerReviewSummaryClassMap.field("organization.disambiguatedOrganization.disambiguatedOrganizationIdentifier", "org.orgDisambiguated.sourceId");
    peerReviewSummaryClassMap.field("organization.disambiguatedOrganization.disambiguationSource", "org.orgDisambiguated.sourceType");
    peerReviewSummaryClassMap.register();
    mapperFactory.classMap(FuzzyDate.class, CompletionDateEntity.class).field("year.value", "year").field("month.value", "month").field("day.value", "day").register();
    return mapperFactory.getMapperFacade();
}

Example 60 with PeerReview

use of org.orcid.jaxb.model.v3.dev1.record.PeerReview in project ORCID-Source by ORCID.

the class ActivityValidatorTest method validatePeerReviewWithoutDisambiguatedOrgId.

@Test(expected = InvalidDisambiguatedOrgException.class)
public void validatePeerReviewWithoutDisambiguatedOrgId() {
    PeerReview pr = getPeerReview();
    pr.getOrganization().getDisambiguatedOrganization().setDisambiguatedOrganizationIdentifier(null);
    activityValidator.validatePeerReview(pr, null, false, true, Visibility.PUBLIC);
}