Examples with ParticipantCohortAnnotation org.pmiops.workbench.db.model.ParticipantCohortAnnotation used on opensource projects

Example 6 with ParticipantCohortAnnotation

use of org.pmiops.workbench.db.model.ParticipantCohortAnnotation in project workbench by all-of-us.

the class ParticipantCohortAnnotationDaoTest method findByAnnotationIdAndCohortReviewIdAndParticipantId.

@Test
public void findByAnnotationIdAndCohortReviewIdAndParticipantId() throws Exception {
    ParticipantCohortAnnotation expectedPCA = new ParticipantCohortAnnotation().annotationId(annotationId).cohortAnnotationDefinitionId(cohortAnnotationDefinitionId).cohortReviewId(cohortReviewId).participantId(participantId).annotationValueBoolean(Boolean.TRUE);
    ParticipantCohortAnnotation actualPCA = participantCohortAnnotationDao.findByAnnotationIdAndCohortReviewIdAndParticipantId(annotationId, cohortReviewId, participantId);
    assertEquals(expectedPCA, actualPCA);
}

Example 7 with ParticipantCohortAnnotation

use of org.pmiops.workbench.db.model.ParticipantCohortAnnotation in project workbench by all-of-us.

the class ParticipantCohortAnnotationDaoTest method findByCohortReviewIdAndParticipantIdEnum.

@Test
public void findByCohortReviewIdAndParticipantIdEnum() throws Exception {
    ParticipantCohortAnnotation expectedPCA = new ParticipantCohortAnnotation().annotationId(annotationId).cohortAnnotationDefinitionId(cohortAnnotationDefinitionId1).cohortReviewId(cohortReviewId).participantId(participantId).annotationValueEnum("test");
    List<ParticipantCohortAnnotation> annotations = participantCohortAnnotationDao.findByCohortReviewIdAndParticipantId(cohortReviewId, participantId);
    assertEquals(2, annotations.size());
    assertEquals(expectedPCA, annotations.get(1));
    assertEquals(new CohortAnnotationEnumValue().name("z").order(0), annotations.get(1).getCohortAnnotationEnumValue());
}

Example 8 with ParticipantCohortAnnotation

use of org.pmiops.workbench.db.model.ParticipantCohortAnnotation in project workbench by all-of-us.

the class ParticipantCohortAnnotationDaoTest method findByCohortReviewIdAndParticipantId.

@Test
public void findByCohortReviewIdAndParticipantId() throws Exception {
    ParticipantCohortAnnotation expectedPCA = new ParticipantCohortAnnotation().annotationId(annotationId).cohortAnnotationDefinitionId(cohortAnnotationDefinitionId).cohortReviewId(cohortReviewId).participantId(participantId).annotationValueBoolean(Boolean.TRUE);
    List<ParticipantCohortAnnotation> annotations = participantCohortAnnotationDao.findByCohortReviewIdAndParticipantId(cohortReviewId, participantId);
    assertEquals(2, annotations.size());
    assertEquals(expectedPCA, annotations.get(0));
}

Example 9 with ParticipantCohortAnnotation

use of org.pmiops.workbench.db.model.ParticipantCohortAnnotation in project workbench by all-of-us.

the class ParticipantCohortAnnotationDaoTest method setUp.

@Before
public void setUp() throws Exception {
    CohortAnnotationDefinition cohortAnnotationDefinition = new CohortAnnotationDefinition().cohortId(COHORT_ID).columnName("enum").annotationType(AnnotationType.ENUM);
    CohortAnnotationEnumValue enumValue1 = new CohortAnnotationEnumValue().name("z").order(0).cohortAnnotationDefinition(cohortAnnotationDefinition);
    CohortAnnotationEnumValue enumValue2 = new CohortAnnotationEnumValue().name("r").order(1).cohortAnnotationDefinition(cohortAnnotationDefinition);
    CohortAnnotationEnumValue enumValue3 = new CohortAnnotationEnumValue().name("a").order(2).cohortAnnotationDefinition(cohortAnnotationDefinition);
    cohortAnnotationDefinition.getEnumValues().add(enumValue1);
    cohortAnnotationDefinition.getEnumValues().add(enumValue2);
    cohortAnnotationDefinition.getEnumValues().add(enumValue3);
    cohortAnnotationDefinitionDao.save(cohortAnnotationDefinition);
    ParticipantCohortAnnotation pca = new ParticipantCohortAnnotation().cohortAnnotationDefinitionId(cohortAnnotationDefinitionId).cohortReviewId(cohortReviewId).participantId(participantId).annotationValueBoolean(Boolean.TRUE);
    ParticipantCohortAnnotation pca1 = new ParticipantCohortAnnotation().cohortAnnotationDefinitionId(cohortAnnotationDefinitionId1).cohortReviewId(cohortReviewId).participantId(participantId).annotationValueEnum("test");
    pca1.setCohortAnnotationEnumValue(enumValue1);
    annotationId = participantCohortAnnotationDao.save(pca).getAnnotationId();
    participantCohortAnnotationDao.save(pca1);
}

Example 10 with ParticipantCohortAnnotation

use of org.pmiops.workbench.db.model.ParticipantCohortAnnotation in project workbench by all-of-us.

the class CohortReviewServiceImplTest method saveParticipantCohortAnnotationModifyBadRequest.

@Test
public void saveParticipantCohortAnnotationModifyBadRequest() throws Exception {
    long annotationId = 1;
    long cohortAnnotationDefinitionId = 1;
    long cohortReviewId = 1;
    long participantId = 1;
    ParticipantCohortAnnotation participantCohortAnnotation = new ParticipantCohortAnnotation().cohortAnnotationDefinitionId(cohortAnnotationDefinitionId).cohortReviewId(cohortReviewId).participantId(participantId);
    assertParticipantCohortAnnotationModifyBadRequest(annotationId, participantCohortAnnotation, AnnotationType.BOOLEAN);
    assertParticipantCohortAnnotationModifyBadRequest(annotationId, participantCohortAnnotation, AnnotationType.INTEGER);
    assertParticipantCohortAnnotationModifyBadRequest(annotationId, participantCohortAnnotation, AnnotationType.STRING);
    assertParticipantCohortAnnotationModifyBadRequest(annotationId, participantCohortAnnotation, AnnotationType.ENUM);
    assertParticipantCohortAnnotationModifyBadRequest(annotationId, participantCohortAnnotation, AnnotationType.DATE);
}