Examples with Transport org.vcell.pathway.Transport used on opensource projects

Example 6 with Transport

use of org.vcell.pathway.Transport in project vcell by virtualcell.

the class PathwayReader method addObjectTransport.

private Transport addObjectTransport(Element element) {
    Transport transport = new TransportImpl();
    addAttributes(transport, element);
    for (Object child : element.getChildren()) {
        if (child instanceof Element) {
            Element childElement = (Element) child;
            if (!addContentTransport(transport, element, childElement)) {
                showUnexpected(childElement, transport);
            }
        }
    }
    pathwayModel.add(transport);
    return transport;
}