Examples with GroupAccessSome org.vcell.util.document.GroupAccessSome used on opensource projects

Example 1 with GroupAccessSome

use of org.vcell.util.document.GroupAccessSome in project vcell by virtualcell.

the class XmlReader method getGroupAccess.

/**
 * This method returns a GroupAccess object from an XML format.
 * Creation date: (5/23/2003 7:27:10 PM)
 * @return cbit.vcell.server.GroupAccess
 * @param xmlGroup org.jdom.Element
 */
private GroupAccess getGroupAccess(Element xmlGroup) {
    // guess the type of group
    String temp = xmlGroup.getAttributeValue(XMLTags.TypeAttrTag);
    java.math.BigDecimal type = new java.math.BigDecimal(temp);
    if (type.equals(GroupAccess.GROUPACCESS_ALL)) {
        // Type ALL
        return new GroupAccessAll();
    } else if (type.equals(GroupAccess.GROUPACCESS_NONE)) {
        // Type NONE
        return new GroupAccessNone();
    } else {
        // Type SOME
        // Read attributes
        // *groupid
        temp = xmlGroup.getAttributeValue(XMLTags.TypeAttrTag);
        java.math.BigDecimal groupid = new java.math.BigDecimal(temp);
        // *hash
        temp = xmlGroup.getAttributeValue(XMLTags.HashAttrTag);
        java.math.BigDecimal hashcode = new java.math.BigDecimal(temp);
        // *users
        List<Element> userlist = xmlGroup.getChildren(XMLTags.UserTag, vcNamespace);
        User[] userArray = new User[userlist.size()];
        boolean[] booleanArray = new boolean[userlist.size()];
        int counter = 0;
        for (Element userElement : userlist) {
            String userid = unMangle(userElement.getAttributeValue(XMLTags.NameAttrTag));
            KeyValue key = new KeyValue(userElement.getAttributeValue(XMLTags.KeyValueAttrTag));
            boolean hidden = Boolean.valueOf(userElement.getAttributeValue(XMLTags.HiddenTag)).booleanValue();
            userArray[counter] = new User(userid, key);
            booleanArray[counter] = hidden;
            counter++;
        }
        // create and return the GroupAccess
        return new GroupAccessSome(groupid, hashcode, userArray, booleanArray);
    }
}

Example 2 with GroupAccessSome

use of org.vcell.util.document.GroupAccessSome in project vcell by virtualcell.

the class DatabaseWindowManager method accessPermissions.

/**
 * Insert the method's description here.
 * Creation date: (5/14/2004 5:35:55 PM)
 */
public void accessPermissions(final Component requester, final VersionInfo selectedVersionInfo) {
    final GroupAccess groupAccess = selectedVersionInfo.getVersion().getGroupAccess();
    final DocumentManager docManager = getRequestManager().getDocumentManager();
    AsynchClientTask task1 = new AsynchClientTask("show dialog", AsynchClientTask.TASKTYPE_SWING_BLOCKING) {

        @Override
        public void run(Hashtable<String, Object> hashTable) throws Exception {
            getAclEditor().clearACLList();
            getAclEditor().setACLState(new ACLEditor.ACLState(groupAccess));
            Object choice = showAccessPermissionDialog(getAclEditor(), requester);
            if (choice != null) {
                hashTable.put("choice", choice);
            }
        }
    };
    AsynchClientTask task2 = new AsynchClientTask("access permission", AsynchClientTask.TASKTYPE_NONSWING_BLOCKING) {

        @Override
        public void run(Hashtable<String, Object> hashTable) throws Exception {
            Object choice = hashTable.get("choice");
            if (choice != null && choice.equals("OK")) {
                ACLEditor.ACLState aclState = getAclEditor().getACLState();
                if (aclState != null) {
                    if (aclState.isAccessPrivate() || (aclState.getAccessList() != null && aclState.getAccessList().length == 0)) {
                        VersionInfo vInfo = null;
                        if (selectedVersionInfo instanceof BioModelInfo) {
                            vInfo = docManager.setGroupPrivate((BioModelInfo) selectedVersionInfo);
                        } else if (selectedVersionInfo instanceof MathModelInfo) {
                            vInfo = docManager.setGroupPrivate((MathModelInfo) selectedVersionInfo);
                        } else if (selectedVersionInfo instanceof GeometryInfo) {
                            vInfo = docManager.setGroupPrivate((GeometryInfo) selectedVersionInfo);
                        } else if (selectedVersionInfo instanceof VCImageInfo) {
                            vInfo = docManager.setGroupPrivate((VCImageInfo) selectedVersionInfo);
                        }
                    } else if (aclState.isAccessPublic()) {
                        VersionInfo vInfo = null;
                        if (selectedVersionInfo instanceof BioModelInfo) {
                            vInfo = docManager.setGroupPublic((BioModelInfo) selectedVersionInfo);
                        } else if (selectedVersionInfo instanceof MathModelInfo) {
                            vInfo = docManager.setGroupPublic((MathModelInfo) selectedVersionInfo);
                        } else if (selectedVersionInfo instanceof GeometryInfo) {
                            vInfo = docManager.setGroupPublic((GeometryInfo) selectedVersionInfo);
                        } else if (selectedVersionInfo instanceof VCImageInfo) {
                            vInfo = docManager.setGroupPublic((VCImageInfo) selectedVersionInfo);
                        }
                    } else {
                        String[] aclUserNames = aclState.getAccessList();
                        String[] originalGroupAccesNames = new String[0];
                        // Turn User[] into String[]
                        if (groupAccess instanceof GroupAccessSome) {
                            GroupAccessSome gas = (GroupAccessSome) groupAccess;
                            User[] originalUsers = gas.getNormalGroupMembers();
                            for (int i = 0; i < originalUsers.length; i += 1) {
                                originalGroupAccesNames = (String[]) BeanUtils.addElement(originalGroupAccesNames, originalUsers[i].getName());
                            }
                        }
                        // Determine users needing adding
                        String[] needToAddUsers = new String[0];
                        for (int i = 0; i < aclUserNames.length; i += 1) {
                            if (!BeanUtils.arrayContains(originalGroupAccesNames, aclUserNames[i])) {
                                System.out.println("Added user=" + aclUserNames[i]);
                                needToAddUsers = (String[]) BeanUtils.addElement(needToAddUsers, aclUserNames[i]);
                            }
                        }
                        // Determine users needing removing
                        String[] needToRemoveUsers = new String[0];
                        for (int i = 0; i < originalGroupAccesNames.length; i += 1) {
                            if (!BeanUtils.arrayContains(aclUserNames, originalGroupAccesNames[i])) {
                                System.out.println("Removed user=" + originalGroupAccesNames[i]);
                                needToRemoveUsers = (String[]) BeanUtils.addElement(needToRemoveUsers, originalGroupAccesNames[i]);
                            }
                        }
                        VersionInfo vInfo = null;
                        String errorNames = "";
                        // Add Users to Group Access List
                        for (int i = 0; i < needToAddUsers.length; i++) {
                            try {
                                if (selectedVersionInfo instanceof BioModelInfo) {
                                    vInfo = docManager.addUserToGroup((BioModelInfo) selectedVersionInfo, needToAddUsers[i]);
                                } else if (selectedVersionInfo instanceof MathModelInfo) {
                                    vInfo = docManager.addUserToGroup((MathModelInfo) selectedVersionInfo, needToAddUsers[i]);
                                } else if (selectedVersionInfo instanceof GeometryInfo) {
                                    vInfo = docManager.addUserToGroup((GeometryInfo) selectedVersionInfo, needToAddUsers[i]);
                                } else if (selectedVersionInfo instanceof VCImageInfo) {
                                    vInfo = docManager.addUserToGroup((VCImageInfo) selectedVersionInfo, needToAddUsers[i]);
                                }
                            } catch (ObjectNotFoundException e) {
                                errorNames += "Error changing permissions.\n" + selectedVersionInfo.getVersionType().getTypeName() + " \"" + selectedVersionInfo.getVersion().getName() + "\" edition (" + selectedVersionInfo.getVersion().getDate() + ")\nnot found, " + "your model list may be out of date, please go to menu Server->Reconnect to refresh the model list" + "\n";
                                break;
                            } catch (DataAccessException e) {
                                errorNames += "Error adding user '" + needToAddUsers[i] + "' : " + e.getMessage() + "\n";
                            }
                        }
                        // Remove users from Group Access List
                        for (int i = 0; i < needToRemoveUsers.length; i++) {
                            try {
                                if (selectedVersionInfo instanceof BioModelInfo) {
                                    vInfo = docManager.removeUserFromGroup((BioModelInfo) selectedVersionInfo, needToRemoveUsers[i]);
                                } else if (selectedVersionInfo instanceof MathModelInfo) {
                                    vInfo = docManager.removeUserFromGroup((MathModelInfo) selectedVersionInfo, needToRemoveUsers[i]);
                                } else if (selectedVersionInfo instanceof GeometryInfo) {
                                    vInfo = docManager.removeUserFromGroup((GeometryInfo) selectedVersionInfo, needToRemoveUsers[i]);
                                } else if (selectedVersionInfo instanceof VCImageInfo) {
                                    vInfo = docManager.removeUserFromGroup((VCImageInfo) selectedVersionInfo, needToRemoveUsers[i]);
                                }
                            } catch (DataAccessException e) {
                                errorNames += "Error Removing user '" + needToRemoveUsers[i] + "'\n  -----" + e.getMessage() + "\n";
                            }
                        }
                        if (errorNames.length() > 0) {
                            if (DatabaseWindowManager.this.getComponent() != null) {
                                PopupGenerator.showErrorDialog(DatabaseWindowManager.this, errorNames);
                            } else {
                                DialogUtils.showErrorDialog(requester, errorNames);
                            }
                            accessPermissions(requester, selectedVersionInfo);
                        }
                    }
                }
            }
        }
    };
    ClientTaskDispatcher.dispatch(requester, new Hashtable<String, Object>(), new AsynchClientTask[] { task1, task2 });
}

Example 3 with GroupAccessSome

use of org.vcell.util.document.GroupAccessSome in project vcell by virtualcell.

the class DbDriver method groupAddUser.

/**
 * This method was created in VisualAge.
 * @return cbit.sql.Versionable
 * @param user cbit.vcell.server.User
 * @param versionable cbit.sql.Versionable
 */
public static void groupAddUser(Connection con, KeyFactory keyFactory, User owner, VersionableType vType, KeyValue vKey, String userAddToGroupString, boolean isHiddenFromOwner, DatabaseSyntax dbSyntax) throws SQLException, ObjectNotFoundException, DataAccessException {
    User userAddToGroup = getUserFromUserid(con, userAddToGroupString);
    if (userAddToGroup == null) {
        throw new IllegalArgumentException("User name " + userAddToGroupString + " not found");
    }
    // 
    if ((con == null) || (vType == null) || (owner == null) || (vKey == null) || (userAddToGroup == null)) {
        throw new IllegalArgumentException("Improper parameters for groupAddUser userAddToGroupString=" + (userAddToGroupString == null ? "NULL" : userAddToGroupString));
    }
    // 
    Version currentVersion = permissionInit(con, vType, vKey, owner);
    // If userAddToGroup is already in group it is an error
    // ----- Also can't add members to GroupAccessAll(Public) (CHANGED!!!) -----
    boolean bExists = false;
    if (currentVersion.getGroupAccess() instanceof GroupAccessSome) {
        bExists = (((GroupAccessSome) currentVersion.getGroupAccess()).isNormalMember(userAddToGroup) && !isHiddenFromOwner) || (((GroupAccessSome) currentVersion.getGroupAccess()).isHiddenMember(userAddToGroup) && isHiddenFromOwner);
    }
    // }
    if (currentVersion.getOwner().compareEqual(userAddToGroup) || bExists) {
        throw new DataAccessException(userAddToGroup + " Already a member of group");
    }
    if (lg.isTraceEnabled())
        lg.trace("DbDriver.groupAddUser(user=" + owner + ", type =" + vType + ", key=" + vKey + ")");
    VersionTable vTable = VersionTable.getVersionTable(vType);
    // 
    // 
    BigDecimal newHash = null;
    // 
    if (currentVersion.getGroupAccess() instanceof GroupAccessSome) {
        // Calculate the hash of the currentVersion's group plus a new user
        GroupAccessSome currentGroup = (GroupAccessSome) currentVersion.getGroupAccess();
        newHash = currentGroup.calculateHashWithNewMember(userAddToGroup, isHiddenFromOwner);
    } else if (currentVersion.getGroupAccess() instanceof GroupAccessNone || currentVersion.getGroupAccess() instanceof GroupAccessAll) {
        // Calculate hash for a new group with only userAddToGroup in it
        KeyValue[] kvArr = new KeyValue[1];
        boolean[] hiddenArr = new boolean[1];
        kvArr[0] = userAddToGroup.getID();
        hiddenArr[0] = isHiddenFromOwner;
        newHash = GroupAccess.calculateHash(kvArr, hiddenArr);
    }
    // 
    BigDecimal updatedGroupID = null;
    // 
    // See if the newly calculated hash is present in the database GroupTable
    // indicating a group we can reuse by reference
    // 
    String sql = "SELECT groupid FROM " + GroupTable.table.getTableName() + " WHERE groupMemberHash = " + newHash.toString();
    java.sql.Statement stmt = con.createStatement();
    try {
        java.sql.ResultSet rset = stmt.executeQuery(sql);
        if (rset.next()) {
            // There may be more than one, just get the first, all have the same groupid and hash
            // Group already exists,Re-Use the groupid, we don't have to make a new group
            updatedGroupID = rset.getBigDecimal(GroupTable.table.groupid.toString());
        }
    } finally {
        stmt.close();
    }
    // 
    if (updatedGroupID == null) {
        // Create new Group id
        updatedGroupID = getNewGroupID(con, keyFactory);
        int groupMemberCount = 1;
        // Get all the members of the currentVersion Group or skip if currentVersion group is GroupAccessNone
        // Don't worry about GroupAccessAll, we couldn't have gotten this far
        // 
        // Add new User
        // 
        sql = "INSERT INTO " + GroupTable.table.getTableName() + " VALUES ( " + keyFactory.getNewKey(con).toString() + "," + updatedGroupID + "," + userAddToGroup.getID().toString() + "," + (isHiddenFromOwner ? "1" : "0") + "," + newHash + " )";
        updateCleanSQL(con, sql);
        if (currentVersion.getGroupAccess() instanceof GroupAccessSome) {
            // Add all the old Normal Users
            User[] normalUsers = ((GroupAccessSome) currentVersion.getGroupAccess()).getNormalGroupMembers();
            for (int i = 0; normalUsers != null && i < normalUsers.length; i += 1) {
                String userRef = normalUsers[i].getID().toString();
                sql = "INSERT INTO " + GroupTable.table.getTableName() + " VALUES ( " + keyFactory.getNewKey(con).toString() + "," + updatedGroupID + "," + userRef + "," + (false ? "1" : "0") + "," + newHash + " )";
                updateCleanSQL(con, sql);
            }
            // Add all the old Hidden Users
            User[] hiddenUsers = ((GroupAccessSome) currentVersion.getGroupAccess()).getHiddenGroupMembers();
            for (int i = 0; hiddenUsers != null && i < hiddenUsers.length; i += 1) {
                String userRef = hiddenUsers[i].getID().toString();
                sql = "INSERT INTO " + GroupTable.table.getTableName() + " VALUES ( " + keyFactory.getNewKey(con).toString() + "," + updatedGroupID + "," + userRef + "," + (true ? "1" : "0") + "," + newHash + " )";
                updateCleanSQL(con, sql);
            }
        }
    }
    // Update the vTable to point to the new Group
    String set = vTable.privacy.getQualifiedColName() + " = " + updatedGroupID;
    String cond = vTable.id.getQualifiedColName() + " = " + vKey;
    // " AND " + vTable.ownerRef.getQualifiedColName() + " = " + owner.getID();
    sql = DatabasePolicySQL.enforceOwnershipUpdate(owner, vTable, set, cond);
    // System.out.println(sql);
    int numRowsProcessed = updateCleanSQL(con, sql);
    if (numRowsProcessed != 1) {
        // 
        // check if update failed
        // 
        Vector<VersionInfo> versionInfoList = getVersionableInfos(con, owner, vType, false, vKey, true, dbSyntax);
        if (versionInfoList.size() == 0) {
            throw new DataAccessException("Add User " + userAddToGroup + " Permission to access failed, " + vType.getTypeName() + "(" + vKey + ") record not found");
        } else {
            throw new DataAccessException("Add User " + userAddToGroup + " Permission to access failed " + vType.getTypeName() + "(" + vKey + ")");
        }
    }
}

Example 4 with GroupAccessSome

use of org.vcell.util.document.GroupAccessSome in project vcell by virtualcell.

the class DbDriver method groupRemoveUser.

/**
 * This method was created in VisualAge.
 * @return cbit.sql.Versionable
 * @param user cbit.vcell.server.User
 * @param versionable cbit.sql.Versionable
 */
public static void groupRemoveUser(Connection con, KeyFactory keyFactory, User owner, VersionableType vType, KeyValue vKey, String userRemoveFromGroupString, boolean isHiddenFromOwner, DatabaseSyntax dbSyntax) throws SQLException, ObjectNotFoundException, DataAccessException {
    User userRemoveFromGroup = getUserFromUserid(con, userRemoveFromGroupString);
    if (userRemoveFromGroup == null) {
        throw new IllegalArgumentException("User name " + userRemoveFromGroupString + " not found");
    }
    // 
    if ((con == null) || (vType == null) || (owner == null) || (vKey == null) || (userRemoveFromGroup == null)) {
        throw new IllegalArgumentException("Improper parameters for groupRemoveUser userRemoveFromGroupString=" + (userRemoveFromGroupString == null ? "NULL" : userRemoveFromGroupString));
    }
    // 
    Version currentVersion = permissionInit(con, vType, vKey, owner);
    // If userRemoveFromGroup is not in group it is an error, or if not a "real" group
    boolean bExists = false;
    if (currentVersion.getGroupAccess() instanceof GroupAccessSome) {
        bExists = (((GroupAccessSome) currentVersion.getGroupAccess()).isNormalMember(userRemoveFromGroup) && !isHiddenFromOwner) || (((GroupAccessSome) currentVersion.getGroupAccess()).isHiddenMember(userRemoveFromGroup) && isHiddenFromOwner);
    }
    if (!bExists) {
        throw new DataAccessException(userRemoveFromGroup + " not a member of group");
    }
    if (lg.isTraceEnabled())
        lg.trace("DbDriver.groupAccessRemoveUser(user=" + owner + ", type =" + vType + ", key=" + vKey + ")");
    GroupAccessSome currentGroup = (GroupAccessSome) currentVersion.getGroupAccess();
    VersionTable vTable = VersionTable.getVersionTable(vType);
    // 
    // calculate hash after removing user (null if last user in group)
    // 
    BigDecimal newHash = null;
    int count = (currentGroup.getNormalGroupMembers() != null ? currentGroup.getNormalGroupMembers().length : 0) + (currentGroup.getHiddenGroupMembers() != null ? currentGroup.getHiddenGroupMembers().length : 0);
    if (count > 1) {
        // See if group already exists without member and get it's ID
        newHash = currentGroup.calculateHashWithoutMember(userRemoveFromGroup, isHiddenFromOwner);
    }
    // 
    BigDecimal updatedGroupID = null;
    String sql = null;
    // 
    if (newHash != null) {
        sql = "SELECT groupid FROM " + GroupTable.table.getTableName() + " WHERE groupMemberHash = " + newHash.toString();
        java.sql.Statement stmt = con.createStatement();
        try {
            java.sql.ResultSet rset = stmt.executeQuery(sql);
            if (rset.next()) {
                // Group already exists,Re-Use
                updatedGroupID = rset.getBigDecimal(GroupTable.table.groupid.toString());
            }
        } finally {
            stmt.close();
        }
    } else {
        // 
        // user was last user in group, new group is the Private Group (AccessNone), groupID is predefined.
        // 
        updatedGroupID = GroupAccess.GROUPACCESS_NONE;
    }
    // 
    if (updatedGroupID == null) {
        updatedGroupID = getNewGroupID(con, keyFactory);
        // 
        // Re-Add Normal users not removed
        // 
        User[] normalUsers = currentGroup.getNormalGroupMembers();
        for (int i = 0; normalUsers != null && i < normalUsers.length; i += 1) {
            if (!(normalUsers[i].compareEqual(userRemoveFromGroup)) || isHiddenFromOwner) {
                String userRef = normalUsers[i].getID().toString();
                sql = "INSERT INTO " + GroupTable.table.getTableName() + " VALUES ( " + keyFactory.getNewKey(con).toString() + "," + updatedGroupID + "," + userRef + "," + (false ? "1" : "0") + "," + newHash + " )";
                updateCleanSQL(con, sql);
            }
        }
        // 
        // Re-Add Hidden users not removed
        // 
        User[] hiddenUsers = currentGroup.getHiddenGroupMembers();
        for (int i = 0; hiddenUsers != null && i < hiddenUsers.length; i += 1) {
            if (!(hiddenUsers[i].compareEqual(userRemoveFromGroup)) || !isHiddenFromOwner) {
                String userRef = hiddenUsers[i].getID().toString();
                sql = "INSERT INTO " + GroupTable.table.getTableName() + " VALUES ( " + keyFactory.getNewKey(con).toString() + "," + updatedGroupID + "," + userRef + "," + (true ? "1" : "0") + "," + newHash + " )";
                updateCleanSQL(con, sql);
            }
        }
    }
    // 
    String set = vTable.privacy.getQualifiedColName() + " = " + updatedGroupID;
    String cond = vTable.id.getQualifiedColName() + " = " + vKey;
    // " AND " + vTable.ownerRef.getQualifiedColName() + " = " + owner.getID();
    sql = DatabasePolicySQL.enforceOwnershipUpdate(owner, vTable, set, cond);
    // System.out.println(sql);
    int numRowsProcessed = updateCleanSQL(con, sql);
    if (numRowsProcessed != 1) {
        // 
        // check if update failed, or just already updated
        // 
        Vector<VersionInfo> versionInfoList = getVersionableInfos(con, owner, vType, false, vKey, true, dbSyntax);
        if (versionInfoList.size() == 0) {
            throw new DataAccessException("Remove User " + userRemoveFromGroup + " Permission to access failed, " + vType.getTypeName() + "(" + vKey + ") record not found");
        } else {
            throw new DataAccessException("Remove User " + userRemoveFromGroup + " Permission to access failed " + vType.getTypeName() + "(" + vKey + ")");
        }
    }
}