Examples with VersionInfo org.vcell.util.document.VersionInfo used on opensource projects

Example 6 with VersionInfo

use of org.vcell.util.document.VersionInfo in project vcell by virtualcell.

the class MathModelDbTreePanel method treeSelection.

/**
 * Comment
 */
protected void treeSelection() {
    TreePath treePath = getJTree1().getSelectionPath();
    if (treePath == null) {
        setSelectedVersionInfo(null);
        return;
    }
    BioModelNode bioModelNode = (BioModelNode) treePath.getLastPathComponent();
    Object object = bioModelNode.getUserObject();
    if (object instanceof VersionInfo) {
        setSelectedVersionInfo((VersionInfo) object);
    } else if (object instanceof VCDocumentInfoNode && bioModelNode.getChildCount() > 0 && ((BioModelNode) bioModelNode.getChildAt(0)).getUserObject() instanceof MathModelInfo) {
        MathModelInfo mathModelInfo = (MathModelInfo) ((BioModelNode) bioModelNode.getChildAt(0)).getUserObject();
        setSelectedVersionInfo(mathModelInfo);
    } else {
        setSelectedVersionInfo(null);
    }
}

Example 7 with VersionInfo

use of org.vcell.util.document.VersionInfo in project vcell by virtualcell.

the class GeometryTreePanel method treeSelection.

/**
 * Comment
 */
protected void treeSelection() {
    TreePath treePath = getJTree1().getSelectionPath();
    if (treePath == null) {
        setSelectedVersionInfo(null);
        return;
    }
    BioModelNode bioModelNode = (BioModelNode) treePath.getLastPathComponent();
    Object object = bioModelNode.getUserObject();
    try {
        BeanUtils.setCursorThroughout(this, java.awt.Cursor.getPredefinedCursor(java.awt.Cursor.WAIT_CURSOR));
        if (object instanceof VersionInfo) {
            setSelectedVersionInfo((VersionInfo) object);
        } else if (object instanceof VCDocumentInfoNode && bioModelNode.getChildCount() > 0 && ((BioModelNode) bioModelNode.getChildAt(0)).getUserObject() instanceof GeometryInfo) {
            GeometryInfo geometryInfo = (GeometryInfo) ((BioModelNode) bioModelNode.getChildAt(0)).getUserObject();
            setSelectedVersionInfo(geometryInfo);
        } else {
            setSelectedVersionInfo(null);
        }
    } catch (Exception exc) {
        handleException(exc);
    } finally {
        BeanUtils.setCursorThroughout(this, java.awt.Cursor.getPredefinedCursor(java.awt.Cursor.DEFAULT_CURSOR));
    }
}

Example 8 with VersionInfo

use of org.vcell.util.document.VersionInfo in project vcell by virtualcell.

the class ImageDbTreePanel method treeSelection.

/**
 * Comment
 */
private void treeSelection() {
    TreeSelectionModel treeSelectionModel = getselectionModel1();
    TreePath treePath = treeSelectionModel.getSelectionPath();
    if (treePath == null) {
        setSelectedVersionInfo(null);
        return;
    }
    BioModelNode bioModelNode = (BioModelNode) treePath.getLastPathComponent();
    Object object = bioModelNode.getUserObject();
    if (object instanceof VersionInfo) {
        setSelectedVersionInfo((VersionInfo) object);
    // 
    // if selected parent of VCImageInfo, setSelection as it's SimulationInfo
    // 
    } else if (object instanceof String && bioModelNode.getChildCount() > 0 && ((BioModelNode) bioModelNode.getChildAt(0)).getUserObject() instanceof VCImageInfo) {
        VCImageInfo imgInfo = (VCImageInfo) ((BioModelNode) bioModelNode.getChildAt(0)).getUserObject();
        setSelectedVersionInfo(imgInfo);
    } else {
        setSelectedVersionInfo(null);
    }
}

Example 9 with VersionInfo

use of org.vcell.util.document.VersionInfo in project vcell by virtualcell.

the class DatabaseServerImpl method getVersionInfos.

/**
 * This method was created in VisualAge.
 * @return GeometryInfo
 * @param key KeyValue
 * @exception org.vcell.util.DataAccessException The exception description.
 * @exception java.rmi.RemoteException The exception description.
 */
private VersionInfo[] getVersionInfos(User user, KeyValue key, VersionableType vType, boolean bAll, boolean bCheckPermission) throws DataAccessException {
    try {
        if (lg.isTraceEnabled())
            lg.trace("DatabaseServerImpl.getVersionInfos(User=" + user + ",vType=" + vType + ",bAll=" + bAll + ")");
        Vector<VersionInfo> vector = dbTop.getVersionableInfos(user, key, vType, bAll, bCheckPermission, true);
        if (vType.equals(VersionableType.BioModelMetaData)) {
            BioModelInfo[] bioModelInfos = new BioModelInfo[vector.size()];
            vector.copyInto(bioModelInfos);
            return bioModelInfos;
        } else if (vType.equals(VersionableType.Geometry)) {
            GeometryInfo[] geoInfos = new GeometryInfo[vector.size()];
            vector.copyInto(geoInfos);
            return geoInfos;
        } else if (vType.equals(VersionableType.MathModelMetaData)) {
            MathModelInfo[] mathInfos = new MathModelInfo[vector.size()];
            vector.copyInto(mathInfos);
            return mathInfos;
        } else if (vType.equals(VersionableType.VCImage)) {
            VCImageInfo[] imgInfos = new VCImageInfo[vector.size()];
            vector.copyInto(imgInfos);
            return imgInfos;
        } else if (vType.equals(VersionableType.Simulation)) {
            SimulationInfo[] simInfos = new SimulationInfo[vector.size()];
            vector.copyInto(simInfos);
            return simInfos;
        } else {
            throw new IllegalArgumentException("Wrong VersinableType vType:" + vType);
        }
    } catch (SQLException e) {
        lg.error(e.getMessage(), e);
        throw new DataAccessException(e.getMessage());
    } catch (ObjectNotFoundException e) {
        lg.error(e.getMessage(), e);
        throw new ObjectNotFoundException(e.getMessage());
    } catch (Throwable e) {
        lg.error(e.getMessage(), e);
        throw new DataAccessException(e.getMessage());
    }
}

Example 10 with VersionInfo

use of org.vcell.util.document.VersionInfo in project vcell by virtualcell.

the class DatabaseServerImpl method groupAddUser.

/**
 * This method was created in VisualAge.
 * @return void
 * @param key KeyValue
 * @exception org.vcell.util.DataAccessException The exception description.
 * @exception java.rmi.RemoteException The exception description.
 */
public VersionInfo groupAddUser(User user, VersionableType vType, KeyValue key, String addUserToGroup, boolean isHidden) throws DataAccessException, ObjectNotFoundException {
    try {
        if (lg.isTraceEnabled())
            lg.trace("DatabaseServerImpl.groupAddUser(vType=" + vType.getTypeName() + ", Key=" + key + ", userToAdd=" + addUserToGroup + ", isHidden=" + isHidden + ")");
        dbTop.groupAddUser(user, vType, key, true, addUserToGroup, isHidden);
        VersionInfo newVersionInfo = (VersionInfo) (dbTop.getVersionableInfos(user, key, vType, false, true, true).elementAt(0));
        return newVersionInfo;
    } catch (SQLException e) {
        lg.error(e.getMessage(), e);
        throw new DataAccessException(e.getMessage());
    } catch (ObjectNotFoundException e) {
        lg.error(e.getMessage(), e);
        throw new ObjectNotFoundException(e.getMessage());
    } catch (Throwable e) {
        lg.error(e.getMessage(), e);
        throw new DataAccessException(e.getMessage());
    }
}