Examples with BoxSize uk.ac.bbsrc.tgac.miso.core.data.BoxSize used on opensource projects

Example 1 with BoxSize

use of uk.ac.bbsrc.tgac.miso.core.data.BoxSize in project miso-lims by miso-lims.

the class Dtos method to.

public static BoxSize to(@Nonnull BoxSizeDto from) {
    BoxSize to = new BoxSize();
    setLong(to::setId, from.getId(), false);
    setInteger(to::setRows, from.getRows(), true);
    setInteger(to::setColumns, from.getColumns(), true);
    setBoolean(to::setScannable, from.isScannable(), false);
    setObject(to::setBoxType, from.getBoxType(), BoxType::valueOf);
    return to;
}

Example 2 with BoxSize

use of uk.ac.bbsrc.tgac.miso.core.data.BoxSize in project miso-lims by miso-lims.

the class Dtos method to.

public static Box to(@Nonnull BoxDto from) {
    Box to = new BoxImpl();
    setLong(to::setId, from.getId(), false);
    setString(to::setAlias, from.getAlias());
    setString(to::setDescription, from.getDescription());
    setString(to::setIdentificationBarcode, from.getIdentificationBarcode());
    setString(to::setLocationBarcode, from.getLocationBarcode());
    setObject(to::setUse, BoxUse::new, from.getUseId());
    setObject(to::setSize, BoxSize::new, from.getSizeId());
    setObject(to::setStorageLocation, StorageLocation::new, from.getStorageLocationId());
    if (!isStringEmptyOrNull(from.getStorageLocationBarcode())) {
        if (to.getStorageLocation() == null) {
            to.setStorageLocation(new StorageLocation());
        }
        StorageLocation storageLocation = to.getStorageLocation();
        setString(storageLocation::setIdentificationBarcode, from.getStorageLocationBarcode());
    }
    return to;
}

Example 3 with BoxSize

use of uk.ac.bbsrc.tgac.miso.core.data.BoxSize in project miso-lims by miso-lims.

the class DefaultBoxSizeService method validateChange.

private void validateChange(BoxSize boxSize, BoxSize beforeChange) throws IOException {
    List<ValidationError> errors = new ArrayList<>();
    long usage = 0L;
    if (beforeChange != null) {
        usage = boxSizeDao.getUsage(beforeChange);
    }
    if (usage > 0L) {
        if (ValidationUtils.isSetAndChanged(BoxSize::getRows, boxSize, beforeChange)) {
            errors.add(new ValidationError("rows", "Cannot resize because box size is already used by " + usage + " " + Pluralizer.boxes(usage)));
        }
        if (ValidationUtils.isSetAndChanged(BoxSize::getColumns, boxSize, beforeChange)) {
            errors.add(new ValidationError("columns", "Cannot resize because box size is already used by " + usage + " " + Pluralizer.boxes(usage)));
        }
    }
    if (!errors.isEmpty()) {
        throw new ValidationException(errors);
    }
}

Example 4 with BoxSize

use of uk.ac.bbsrc.tgac.miso.core.data.BoxSize in project miso-lims by miso-lims.

the class DefaultBoxSizeService method update.

@Override
public long update(BoxSize boxSize) throws IOException {
    authorizationManager.throwIfNonAdmin();
    BoxSize managed = get(boxSize.getId());
    validateChange(boxSize, managed);
    applyChanges(managed, boxSize);
    return boxSizeDao.update(managed);
}

Example 5 with BoxSize

use of uk.ac.bbsrc.tgac.miso.core.data.BoxSize in project miso-lims by miso-lims.

the class HibernateBoxSizeDaoIT method testGet.

@Test
public void testGet() throws IOException {
    long id = 1L;
    BoxSize stain = sut.get(id);
    assertNotNull(stain);
    assertEquals(id, stain.getId());
}