Examples with DetailedLibraryTemplate uk.ac.bbsrc.tgac.miso.core.data.impl.DetailedLibraryTemplate used on opensource projects

Example 1 with DetailedLibraryTemplate

use of uk.ac.bbsrc.tgac.miso.core.data.impl.DetailedLibraryTemplate in project miso-lims by miso-lims.

the class EditLibraryTemplateController method create.

@GetMapping("/new")
public ModelAndView create(@RequestParam(name = "projectId", required = false) Long projectId, ModelMap model) throws IOException {
    LibraryTemplate template = isDetailedSampleEnabled() ? new DetailedLibraryTemplate() : new LibraryTemplate();
    if (projectId != null) {
        Project project = projectService.get(projectId);
        if (project == null) {
            throw new ClientErrorException("No project found with ID: " + projectId);
        }
        template.getProjects().add(project);
    }
    model.put(PageMode.PROPERTY, PageMode.CREATE.getLabel());
    model.put("title", "New Library Template");
    return libraryTemplatePage(template, model);
}

Example 2 with DetailedLibraryTemplate

use of uk.ac.bbsrc.tgac.miso.core.data.impl.DetailedLibraryTemplate in project miso-lims by miso-lims.

the class DefaultLibraryTemplateService method applyChanges.

@Override
protected void applyChanges(LibraryTemplate target, LibraryTemplate source) {
    target.setAlias(source.getAlias());
    target.setPlatformType(source.getPlatformType());
    target.setLibraryType(source.getLibraryType());
    target.setLibrarySelectionType(source.getLibrarySelectionType());
    target.setLibraryStrategyType(source.getLibraryStrategyType());
    target.setKitDescriptor(source.getKitDescriptor());
    target.setIndexFamily(source.getIndexFamily());
    target.setDefaultVolume(source.getDefaultVolume());
    target.setVolumeUnits(source.getVolumeUnits());
    applyProjectChanges(target.getProjects(), source.getProjects());
    if (target instanceof DetailedLibraryTemplate) {
        DetailedLibraryTemplate dSource = (DetailedLibraryTemplate) source;
        DetailedLibraryTemplate dTarget = (DetailedLibraryTemplate) target;
        dTarget.setLibraryDesign(dSource.getLibraryDesign());
        dTarget.setLibraryDesignCode(dSource.getLibraryDesignCode());
    }
    applyIndexChanges(target.getIndexOnes(), source.getIndexOnes());
    applyIndexChanges(target.getIndexTwos(), source.getIndexTwos());
}

Example 3 with DetailedLibraryTemplate

use of uk.ac.bbsrc.tgac.miso.core.data.impl.DetailedLibraryTemplate in project miso-lims by miso-lims.

the class Dtos method toDetailedLibraryTemplate.

public static DetailedLibraryTemplate toDetailedLibraryTemplate(DetailedLibraryTemplateDto from) {
    if (from == null)
        return null;
    DetailedLibraryTemplate to = new DetailedLibraryTemplate();
    setObject(to::setLibraryDesign, LibraryDesign::new, from.getDesignId());
    setObject(to::setLibraryDesignCode, LibraryDesignCode::new, from.getDesignCodeId());
    return to;
}