Examples with AssociationEventView uk.ac.ebi.spot.goci.curation.model.AssociationEventView used on opensource projects

Example 1 with AssociationEventView

use of uk.ac.ebi.spot.goci.curation.model.AssociationEventView in project goci by EBISPOT.

the class AssociationEventsViewService method createViews.

@Override
public List<EventView> createViews(Long studyId) {
    List<EventView> views = new ArrayList<>();
    Collection<Association> associations = studyRepository.findOne(studyId).getAssociations();
    if (!associations.isEmpty()) {
        // For each association gather up the events into a collection of views
        associations.forEach(association -> {
            Collection<Event> events = association.getEvents();
            Long associationId = association.getId();
            Collection<SingleNucleotidePolymorphism> snps = singleNucleotidePolymorphismRepository.findByRiskAllelesLociAssociationId(associationId);
            String associationSummary;
            StringJoiner snpJoiner = new StringJoiner(", ");
            snps.forEach(singleNucleotidePolymorphism -> {
                snpJoiner.add(singleNucleotidePolymorphism.getRsId());
            });
            associationSummary = snpJoiner.toString();
            events.forEach(event -> {
                String eventName = eventTypeService.translateEventByEventType(event.getEventType());
                EventView eventView = new AssociationEventView(eventName, event.getEventDate(), associationId, event.getUser().getEmail(), associationSummary);
                views.add(eventView);
            });
        });
    }
    return views;
}