Examples with FlightFilter bio.terra.stairway.FlightFilter used on opensource projects

Example 1 with FlightFilter

use of bio.terra.stairway.FlightFilter in project terra-workspace-manager by DataBiosphere.

the class JobService method enumerateJobs.

public List<ApiJobReport> enumerateJobs(int offset, int limit, AuthenticatedUserRequest userRequest) {
    List<FlightState> flightStateList;
    try {
        FlightFilter filter = new FlightFilter();
        filter.addFilterInputParameter(JobMapKeys.SUBJECT_ID.getKeyName(), FlightFilterOp.EQUAL, userRequest.getSubjectId());
        flightStateList = stairwayComponent.get().getFlights(offset, limit, filter);
    } catch (StairwayException | InterruptedException stairwayEx) {
        throw new InternalStairwayException(stairwayEx);
    }
    List<ApiJobReport> jobReportList = new ArrayList<>();
    for (FlightState flightState : flightStateList) {
        ApiJobReport jobReport = mapFlightStateToApiJobReport(flightState);
        jobReportList.add(jobReport);
    }
    return jobReportList;
}

Example 2 with FlightFilter

use of bio.terra.stairway.FlightFilter in project terra-workspace-manager by DataBiosphere.

the class Alpha1Service method buildFlightFilter.

private FlightFilter buildFlightFilter(UUID workspaceId, @Nullable WsmResourceFamily cloudResourceType, @Nullable StewardshipType stewardshipType, @Nullable String resourceName, @Nullable JobStateFilter jobStateFilter) {
    FlightFilter filter = new FlightFilter();
    // Always filter by workspace
    filter.addFilterInputParameter(WorkspaceFlightMapKeys.WORKSPACE_ID, FlightFilterOp.EQUAL, workspaceId.toString());
    // Add optional filters
    Optional.ofNullable(cloudResourceType).map(t -> filter.addFilterInputParameter(ResourceKeys.RESOURCE_TYPE, FlightFilterOp.EQUAL, t));
    Optional.ofNullable(stewardshipType).map(t -> filter.addFilterInputParameter(ResourceKeys.STEWARDSHIP_TYPE, FlightFilterOp.EQUAL, t));
    Optional.ofNullable(resourceName).map(t -> filter.addFilterInputParameter(ResourceKeys.RESOURCE_NAME, FlightFilterOp.EQUAL, t));
    Optional.ofNullable(jobStateFilter).map(t -> addStateFilter(filter, t));
    return filter;
}

Example 3 with FlightFilter

use of bio.terra.stairway.FlightFilter in project terra-workspace-manager by DataBiosphere.

the class Alpha1Service method enumerateJobs.

/**
 * List Stairway flights related to a workspace. These inputs are translated into inputs to
 * Stairway's getFlights calls. The resulting flights are translated into enumerated jobs. The
 * jobs are ordered by submit time.
 *
 * @param workspaceId workspace we are listing in
 * @param userRequest authenticated user
 * @param limit max number of jobs to return
 * @param pageToken optional starting place in the result set; start at beginning if missing
 * @param cloudResourceType optional filter by cloud resource type
 * @param stewardshipType optional filter by stewardship type
 * @param resourceName optional filter by resource name
 * @param jobStateFilter optional filter by job state
 * @return POJO containing the results
 */
public EnumeratedJobs enumerateJobs(UUID workspaceId, AuthenticatedUserRequest userRequest, int limit, @Nullable String pageToken, @Nullable WsmResourceFamily cloudResourceType, @Nullable StewardshipType stewardshipType, @Nullable String resourceName, @Nullable JobStateFilter jobStateFilter) {
    features.alpha1EnabledCheck();
    // Readers can see the workspace jobs list
    workspaceService.validateWorkspaceAndAction(userRequest, workspaceId, SamConstants.SamWorkspaceAction.READ);
    FlightEnumeration flightEnumeration;
    try {
        FlightFilter filter = buildFlightFilter(workspaceId, cloudResourceType, stewardshipType, resourceName, jobStateFilter);
        flightEnumeration = stairwayComponent.get().getFlights(pageToken, limit, filter);
    } catch (StairwayException | InterruptedException stairwayEx) {
        throw new InternalStairwayException(stairwayEx);
    }
    List<EnumeratedJob> jobList = new ArrayList<>();
    for (FlightState state : flightEnumeration.getFlightStateList()) {
        FlightMap inputMap = state.getInputParameters();
        OperationType operationType = (inputMap.containsKey(WorkspaceFlightMapKeys.OPERATION_TYPE)) ? inputMap.get(WorkspaceFlightMapKeys.OPERATION_TYPE, OperationType.class) : OperationType.UNKNOWN;
        WsmResource wsmResource = (inputMap.containsKey(ResourceKeys.RESOURCE)) ? inputMap.get(ResourceKeys.RESOURCE, new TypeReference<>() {
        }) : null;
        String jobDescription = (inputMap.containsKey(JobMapKeys.DESCRIPTION.getKeyName())) ? inputMap.get(JobMapKeys.DESCRIPTION.getKeyName(), String.class) : StringUtils.EMPTY;
        EnumeratedJob enumeratedJob = new EnumeratedJob().flightState(state).jobDescription(jobDescription).operationType(operationType).resource(wsmResource);
        jobList.add(enumeratedJob);
    }
    return new EnumeratedJobs().pageToken(flightEnumeration.getNextPageToken()).totalResults(flightEnumeration.getTotalFlights()).results(jobList);
}

Example 4 with FlightFilter

use of bio.terra.stairway.FlightFilter in project jade-data-repo by DataBiosphere.

the class JobService method enumerateJobs.

public List<JobModel> enumerateJobs(int offset, int limit, AuthenticatedUserRequest userReq) {
    boolean canListAnyJob = checkUserCanListAnyJob(userReq);
    // if the user has access to all jobs, then fetch everything
    // otherwise, filter the jobs on the user
    List<FlightState> flightStateList;
    try {
        FlightFilter filter = new FlightFilter();
        if (!canListAnyJob) {
            filter.addFilterInputParameter(JobMapKeys.SUBJECT_ID.getKeyName(), FlightFilterOp.EQUAL, userReq.getSubjectId());
        }
        flightStateList = stairway.getFlights(offset, limit, filter);
    } catch (StairwayException stairwayEx) {
        throw new InternalStairwayException(stairwayEx);
    } catch (InterruptedException ex) {
        throw new JobServiceShutdownException("Job service interrupted", ex);
    }
    List<JobModel> jobModelList = new ArrayList<>();
    for (FlightState flightState : flightStateList) {
        JobModel jobModel = mapFlightStateToJobModel(flightState);
        jobModelList.add(jobModel);
    }
    return jobModelList;
}