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Example 1 with ApiGcpBigQueryDatasetUpdateParameters

use of bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters in project terra-workspace-manager by DataBiosphere.

the class ControlledResourceServiceTest method updateBqDatasetUndo.

@Test
@DisabledIfEnvironmentVariable(named = "TEST_ENV", matches = BUFFER_SERVICE_DISABLED_ENVS_REG_EX)
void updateBqDatasetUndo() throws Exception {
    // create the dataset
    String datasetId = ControlledResourceFixtures.uniqueDatasetId();
    String location = "us-central1";
    Integer initialDefaultTableLifetime = 4800;
    Integer initialDefaultPartitionLifetime = 4801;
    ApiGcpBigQueryDatasetCreationParameters creationParameters = new ApiGcpBigQueryDatasetCreationParameters().datasetId(datasetId).location(location).defaultTableLifetime(initialDefaultTableLifetime).defaultPartitionLifetime(initialDefaultPartitionLifetime);
    ControlledBigQueryDatasetResource resource = ControlledResourceFixtures.makeDefaultControlledBigQueryBuilder(workspace.getWorkspaceId()).datasetName(datasetId).build();
    ControlledBigQueryDatasetResource createdDataset = controlledResourceService.createControlledResourceSync(resource, null, user.getAuthenticatedRequest(), creationParameters).castByEnum(WsmResourceType.CONTROLLED_GCP_BIG_QUERY_DATASET);
    assertEquals(resource, createdDataset);
    // Test idempotency of dataset-specific steps by retrying them once.
    Map<String, StepStatus> retrySteps = new HashMap<>();
    retrySteps.put(RetrieveBigQueryDatasetCloudAttributesStep.class.getName(), StepStatus.STEP_RESULT_FAILURE_RETRY);
    retrySteps.put(UpdateBigQueryDatasetStep.class.getName(), StepStatus.STEP_RESULT_FAILURE_RETRY);
    jobService.setFlightDebugInfoForTest(FlightDebugInfo.newBuilder().lastStepFailure(true).undoStepFailures(retrySteps).build());
    // update the dataset
    ApiGcpBigQueryDatasetUpdateParameters updateParameters = new ApiGcpBigQueryDatasetUpdateParameters().defaultTableLifetime(3600).defaultPartitionLifetime(3601);
    // Service methods which wait for a flight to complete will throw an
    // InvalidResultStateException when that flight fails without a cause, which occurs when a
    // flight fails via debugInfo.
    assertThrows(InvalidResultStateException.class, () -> controlledResourceService.updateBqDataset(resource, updateParameters, user.getAuthenticatedRequest(), "NEW_updateBqDatasetUndo", "new resource description"));
    // check the properties stored on the cloud were not updated
    validateBigQueryDatasetCloudMetadata(projectId, createdDataset.getDatasetName(), location, initialDefaultTableLifetime, initialDefaultPartitionLifetime);
    // check the properties stored in WSM were not updated
    ControlledBigQueryDatasetResource fetchedResource = controlledResourceService.getControlledResource(workspace.getWorkspaceId(), resource.getResourceId(), user.getAuthenticatedRequest()).castByEnum(WsmResourceType.CONTROLLED_GCP_BIG_QUERY_DATASET);
    assertEquals(resource.getName(), fetchedResource.getName());
    assertEquals(resource.getDescription(), fetchedResource.getDescription());
}
Also used : HashMap(java.util.HashMap) ApiGcpBigQueryDatasetUpdateParameters(bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters) ApiGcpBigQueryDatasetCreationParameters(bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetCreationParameters) StepStatus(bio.terra.stairway.StepStatus) ControlledBigQueryDatasetResource(bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.ControlledBigQueryDatasetResource) UpdateBigQueryDatasetStep(bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.UpdateBigQueryDatasetStep) RetrieveBigQueryDatasetCloudAttributesStep(bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.RetrieveBigQueryDatasetCloudAttributesStep) Test(org.junit.jupiter.api.Test) BaseConnectedTest(bio.terra.workspace.common.BaseConnectedTest) DisabledIfEnvironmentVariable(org.junit.jupiter.api.condition.DisabledIfEnvironmentVariable)

Example 2 with ApiGcpBigQueryDatasetUpdateParameters

use of bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters in project terra-workspace-manager by DataBiosphere.

the class ControlledResourceServiceTest method createGetUpdateDeleteBqDataset.

@Test
@DisabledIfEnvironmentVariable(named = "TEST_ENV", matches = BUFFER_SERVICE_DISABLED_ENVS_REG_EX)
void createGetUpdateDeleteBqDataset() throws Exception {
    String datasetId = "my_test_dataset";
    String location = "us-central1";
    ApiGcpBigQueryDatasetCreationParameters creationParameters = new ApiGcpBigQueryDatasetCreationParameters().datasetId(datasetId).location(location);
    ControlledBigQueryDatasetResource resource = ControlledResourceFixtures.makeDefaultControlledBigQueryBuilder(workspace.getWorkspaceId()).datasetName(datasetId).build();
    ControlledBigQueryDatasetResource createdDataset = controlledResourceService.createControlledResourceSync(resource, null, user.getAuthenticatedRequest(), creationParameters).castByEnum(WsmResourceType.CONTROLLED_GCP_BIG_QUERY_DATASET);
    assertEquals(resource, createdDataset);
    ControlledBigQueryDatasetResource fetchedDataset = controlledResourceService.getControlledResource(workspace.getWorkspaceId(), resource.getResourceId(), user.getAuthenticatedRequest()).castByEnum(WsmResourceType.CONTROLLED_GCP_BIG_QUERY_DATASET);
    assertEquals(resource, fetchedDataset);
    String newName = "NEW_createGetUpdateDeleteBqDataset";
    String newDescription = "new resource description";
    Integer newDefaultTableLifetime = 3600;
    Integer newDefaultPartitionLifetime = 3601;
    ApiGcpBigQueryDatasetUpdateParameters updateParameters = new ApiGcpBigQueryDatasetUpdateParameters().defaultTableLifetime(newDefaultTableLifetime).defaultPartitionLifetime(newDefaultPartitionLifetime);
    controlledResourceService.updateBqDataset(fetchedDataset, updateParameters, user.getAuthenticatedRequest(), newName, newDescription);
    ControlledBigQueryDatasetResource updatedResource = controlledResourceService.getControlledResource(workspace.getWorkspaceId(), resource.getResourceId(), user.getAuthenticatedRequest()).castByEnum(WsmResourceType.CONTROLLED_GCP_BIG_QUERY_DATASET);
    assertEquals(newName, updatedResource.getName());
    assertEquals(newDescription, updatedResource.getDescription());
    Dataset updatedDatasetFromCloud = crlService.createWsmSaBigQueryCow().datasets().get(projectId, datasetId).execute();
    assertEquals(newDefaultTableLifetime * 1000L, updatedDatasetFromCloud.getDefaultTableExpirationMs());
    assertEquals(newDefaultPartitionLifetime * 1000L, updatedDatasetFromCloud.getDefaultPartitionExpirationMs());
    controlledResourceService.deleteControlledResourceSync(resource.getWorkspaceId(), resource.getResourceId(), user.getAuthenticatedRequest());
    assertThrows(ResourceNotFoundException.class, () -> controlledResourceService.getControlledResource(workspace.getWorkspaceId(), resource.getResourceId(), user.getAuthenticatedRequest()));
    features.setAlpha1Enabled(true);
    StairwayTestUtils.enumerateJobsDump(alpha1Service, workspace.getWorkspaceId(), user.getAuthenticatedRequest());
}
Also used : ApiGcpBigQueryDatasetUpdateParameters(bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters) Dataset(com.google.api.services.bigquery.model.Dataset) ApiGcpBigQueryDatasetCreationParameters(bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetCreationParameters) ControlledBigQueryDatasetResource(bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.ControlledBigQueryDatasetResource) Test(org.junit.jupiter.api.Test) BaseConnectedTest(bio.terra.workspace.common.BaseConnectedTest) DisabledIfEnvironmentVariable(org.junit.jupiter.api.condition.DisabledIfEnvironmentVariable)

Example 3 with ApiGcpBigQueryDatasetUpdateParameters

use of bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters in project terra-workspace-manager by DataBiosphere.

the class ControlledResourceServiceTest method updateBqDatasetDo.

@Test
@DisabledIfEnvironmentVariable(named = "TEST_ENV", matches = BUFFER_SERVICE_DISABLED_ENVS_REG_EX)
void updateBqDatasetDo() throws Exception {
    // create the dataset
    String datasetId = ControlledResourceFixtures.uniqueDatasetId();
    String location = "us-central1";
    ApiGcpBigQueryDatasetCreationParameters creationParameters = new ApiGcpBigQueryDatasetCreationParameters().datasetId(datasetId).location(location);
    ControlledBigQueryDatasetResource resource = ControlledResourceFixtures.makeDefaultControlledBigQueryBuilder(workspace.getWorkspaceId()).datasetName(datasetId).build();
    ControlledBigQueryDatasetResource createdDataset = controlledResourceService.createControlledResourceSync(resource, null, user.getAuthenticatedRequest(), creationParameters).castByEnum(WsmResourceType.CONTROLLED_GCP_BIG_QUERY_DATASET);
    assertEquals(resource, createdDataset);
    // Test idempotency of dataset-specific steps by retrying them once.
    Map<String, StepStatus> retrySteps = new HashMap<>();
    retrySteps.put(RetrieveBigQueryDatasetCloudAttributesStep.class.getName(), StepStatus.STEP_RESULT_FAILURE_RETRY);
    retrySteps.put(UpdateBigQueryDatasetStep.class.getName(), StepStatus.STEP_RESULT_FAILURE_RETRY);
    jobService.setFlightDebugInfoForTest(FlightDebugInfo.newBuilder().doStepFailures(retrySteps).build());
    // update the dataset
    String newName = "NEW_updateBqDatasetDo";
    String newDescription = "new resource description";
    Integer newDefaultTableLifetime = 3600;
    Integer newDefaultPartitionLifetime = 3601;
    ApiGcpBigQueryDatasetUpdateParameters updateParameters = new ApiGcpBigQueryDatasetUpdateParameters().defaultTableLifetime(newDefaultTableLifetime).defaultPartitionLifetime(newDefaultPartitionLifetime);
    controlledResourceService.updateBqDataset(resource, updateParameters, user.getAuthenticatedRequest(), newName, newDescription);
    // check the properties stored on the cloud were updated
    validateBigQueryDatasetCloudMetadata(projectId, createdDataset.getDatasetName(), location, newDefaultTableLifetime, newDefaultPartitionLifetime);
    // check the properties stored in WSM were updated
    ControlledBigQueryDatasetResource fetchedResource = controlledResourceService.getControlledResource(workspace.getWorkspaceId(), resource.getResourceId(), user.getAuthenticatedRequest()).castByEnum(WsmResourceType.CONTROLLED_GCP_BIG_QUERY_DATASET);
    assertEquals(newName, fetchedResource.getName());
    assertEquals(newDescription, fetchedResource.getDescription());
}
Also used : HashMap(java.util.HashMap) ApiGcpBigQueryDatasetUpdateParameters(bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters) ApiGcpBigQueryDatasetCreationParameters(bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetCreationParameters) StepStatus(bio.terra.stairway.StepStatus) ControlledBigQueryDatasetResource(bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.ControlledBigQueryDatasetResource) UpdateBigQueryDatasetStep(bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.UpdateBigQueryDatasetStep) RetrieveBigQueryDatasetCloudAttributesStep(bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.RetrieveBigQueryDatasetCloudAttributesStep) Test(org.junit.jupiter.api.Test) BaseConnectedTest(bio.terra.workspace.common.BaseConnectedTest) DisabledIfEnvironmentVariable(org.junit.jupiter.api.condition.DisabledIfEnvironmentVariable)

Example 4 with ApiGcpBigQueryDatasetUpdateParameters

use of bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters in project terra-workspace-manager by DataBiosphere.

the class ControlledResourceServiceTest method updateBqDatasetWithInvalidExpirationTimes.

@Test
@DisabledIfEnvironmentVariable(named = "TEST_ENV", matches = BUFFER_SERVICE_DISABLED_ENVS_REG_EX)
void updateBqDatasetWithInvalidExpirationTimes() throws Exception {
    // create the dataset, with expiration times initially undefined
    String datasetId = ControlledResourceFixtures.uniqueDatasetId();
    String location = "us-central1";
    ApiGcpBigQueryDatasetCreationParameters creationParameters = new ApiGcpBigQueryDatasetCreationParameters().datasetId(datasetId).location(location);
    ControlledBigQueryDatasetResource resource = ControlledResourceFixtures.makeDefaultControlledBigQueryBuilder(workspace.getWorkspaceId()).datasetName(datasetId).build();
    ControlledBigQueryDatasetResource createdDataset = controlledResourceService.createControlledResourceSync(resource, null, user.getAuthenticatedRequest(), creationParameters).castByEnum(WsmResourceType.CONTROLLED_GCP_BIG_QUERY_DATASET);
    // make an update request to set the table expiration time to an invalid value (<3600)
    final ApiGcpBigQueryDatasetUpdateParameters updateParameters = new ApiGcpBigQueryDatasetUpdateParameters().defaultTableLifetime(3000).defaultPartitionLifetime(3601);
    assertThrows(BadRequestException.class, () -> controlledResourceService.updateBqDataset(resource, updateParameters, user.getAuthenticatedRequest(), null, null));
    // check the expiration times stored on the cloud are still undefined, because the update above
    // failed
    validateBigQueryDatasetCloudMetadata(projectId, createdDataset.getDatasetName(), location, null, null);
    // make another update request to set the partition expiration time to an invalid value (<0)
    final ApiGcpBigQueryDatasetUpdateParameters updateParameters2 = new ApiGcpBigQueryDatasetUpdateParameters().defaultTableLifetime(3600).defaultPartitionLifetime(-2);
    assertThrows(BadRequestException.class, () -> controlledResourceService.updateBqDataset(resource, updateParameters2, user.getAuthenticatedRequest(), null, null));
    // check the expiration times stored on the cloud are still undefined, because the update above
    // failed
    validateBigQueryDatasetCloudMetadata(projectId, createdDataset.getDatasetName(), location, null, null);
}
Also used : ApiGcpBigQueryDatasetUpdateParameters(bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters) ApiGcpBigQueryDatasetCreationParameters(bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetCreationParameters) ControlledBigQueryDatasetResource(bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.ControlledBigQueryDatasetResource) Test(org.junit.jupiter.api.Test) BaseConnectedTest(bio.terra.workspace.common.BaseConnectedTest) DisabledIfEnvironmentVariable(org.junit.jupiter.api.condition.DisabledIfEnvironmentVariable)

Example 5 with ApiGcpBigQueryDatasetUpdateParameters

use of bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters in project terra-workspace-manager by DataBiosphere.

the class UpdateBigQueryDatasetStep method doStep.

@Override
public StepResult doStep(FlightContext flightContext) throws InterruptedException, RetryException {
    final FlightMap inputMap = flightContext.getInputParameters();
    final ApiGcpBigQueryDatasetUpdateParameters updateParameters = inputMap.get(UPDATE_PARAMETERS, ApiGcpBigQueryDatasetUpdateParameters.class);
    return updateDataset(updateParameters);
}
Also used : ApiGcpBigQueryDatasetUpdateParameters(bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters) FlightMap(bio.terra.stairway.FlightMap)

Aggregations

ApiGcpBigQueryDatasetUpdateParameters (bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetUpdateParameters)9 Test (org.junit.jupiter.api.Test)6 BaseConnectedTest (bio.terra.workspace.common.BaseConnectedTest)5 ApiGcpBigQueryDatasetCreationParameters (bio.terra.workspace.generated.model.ApiGcpBigQueryDatasetCreationParameters)5 ControlledBigQueryDatasetResource (bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.ControlledBigQueryDatasetResource)5 DisabledIfEnvironmentVariable (org.junit.jupiter.api.condition.DisabledIfEnvironmentVariable)5 FlightMap (bio.terra.stairway.FlightMap)3 StepStatus (bio.terra.stairway.StepStatus)2 RetrieveBigQueryDatasetCloudAttributesStep (bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.RetrieveBigQueryDatasetCloudAttributesStep)2 UpdateBigQueryDatasetStep (bio.terra.workspace.service.resource.controlled.cloud.gcp.bqdataset.UpdateBigQueryDatasetStep)2 Dataset (com.google.api.services.bigquery.model.Dataset)2 HashMap (java.util.HashMap)2 BigQueryCow (bio.terra.cloudres.google.bigquery.BigQueryCow)1 StepResult (bio.terra.stairway.StepResult)1 BaseUnitTest (bio.terra.workspace.common.BaseUnitTest)1 IOException (java.io.IOException)1