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Example 1 with CoverageFileProcessor

use of ca.corefacility.bioinformatics.irida.processing.impl.CoverageFileProcessor in project irida by phac-nml.

the class CoverageFileProcessorTest method setup.

@Before
public void setup() {
    qcEntryRepository = mock(QCEntryRepository.class);
    analysisRepository = mock(AnalysisRepository.class);
    processor = new CoverageFileProcessor(qcEntryRepository, analysisRepository);
}
Also used : QCEntryRepository(ca.corefacility.bioinformatics.irida.repositories.sample.QCEntryRepository) AnalysisRepository(ca.corefacility.bioinformatics.irida.repositories.analysis.AnalysisRepository) CoverageFileProcessor(ca.corefacility.bioinformatics.irida.processing.impl.CoverageFileProcessor) Before(org.junit.Before)

Aggregations

CoverageFileProcessor (ca.corefacility.bioinformatics.irida.processing.impl.CoverageFileProcessor)1 AnalysisRepository (ca.corefacility.bioinformatics.irida.repositories.analysis.AnalysisRepository)1 QCEntryRepository (ca.corefacility.bioinformatics.irida.repositories.sample.QCEntryRepository)1 Before (org.junit.Before)1