Examples with AnalysisService ca.corefacility.bioinformatics.irida.service.AnalysisService used on opensource projects

Example 1 with AnalysisService

use of ca.corefacility.bioinformatics.irida.service.AnalysisService in project irida by phac-nml.

the class SampleSequenceFilesControllerTest method setUp.

@Before
public void setUp() {
    sampleService = mock(SampleService.class);
    miseqRunService = mock(SequencingRunService.class);
    sequencingObjectService = mock(SequencingObjectService.class);
    analysisService = mock(AnalysisService.class);
    controller = new RESTSampleSequenceFilesController(sampleService, miseqRunService, sequencingObjectService, analysisService);
}

Example 2 with AnalysisService

use of ca.corefacility.bioinformatics.irida.service.AnalysisService in project irida by phac-nml.

the class SequenceFileControllerTest method setUp.

@Before
public void setUp() {
    sequencingRunService = mock(SequencingRunService.class);
    analysisService = mock(AnalysisService.class);
    objectService = mock(SequencingObjectService.class);
    controller = new SequenceFileController(objectService, sequencingRunService, analysisService);
    Path path = Paths.get(FILE_PATH);
    SequenceFile file = new SequenceFile(path);
    file.setId(FILE_ID);
    SingleEndSequenceFile seqObject = new SingleEndSequenceFile(file);
    when(objectService.read(anyLong())).thenReturn(seqObject);
}