Examples with OBX ca.uhn.hl7v2.model.v25.segment.OBX used on opensource projects

Example 46 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldPreferFormIdIfUuidIsNotFound.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldPreferFormIdIfUuidIsNotFound() throws Exception {
    // save original encounter count
    List<Encounter> encounters = Context.getEncounterService().getEncountersByPatient(new Patient(3));
    Integer originalEncounters = encounters.size();
    // process message
    String hl7String = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20090728170332||ORU^R01|gu99yBh4loLX2mh9cHaV|P|2.5|1||||||||1^AMRS.ELD.FORMID~oicu812^AMRS.ELD.FORMUUID^^\r" + "PID|||3^^^^||Beren^John^Bondo||\r" + "PV1||O|1^Unknown||||1^Super User (admin)|||||||||||||||||||||||||||||||||||||20090714|||||||V\r" + "ORC|RE||||||||20090728165937|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|2|NM|5497^CD4 COUNT^99DCT||123|||||||||20090714";
    Message hl7message = parser.parse(hl7String);
    router.processMessage(hl7message);
    // make sure an encounter was added
    encounters = Context.getEncounterService().getEncountersByPatient(new Patient(3));
    Assert.assertEquals(originalEncounters + 1, encounters.size());
    // get last encounter
    Encounter enc = encounters.get(encounters.size() - 1);
    // check the form id
    Form form = enc.getForm();
    Assert.assertEquals(1, form.getId().intValue());
}

Example 47 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldSetValue_NumericForObsIfQuestionDatatypeIsNumericAndTheAnswerIsEither0Or1.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldSetValue_NumericForObsIfQuestionDatatypeIsNumericAndTheAnswerIsEither0Or1() throws Exception {
    ObsService os = Context.getObsService();
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||7^^^^||Collet^Test^Chebaskwony||\r" + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|1|NM|5497^CD4, BY FACS^99DCT||1|||||||||20080206";
    // the expected question for the obs in the hl7 message has to be
    // numeric
    Assert.assertEquals("Numeric", Context.getConceptService().getConcept(5497).getDatatype().getName());
    List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
    List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
    Obs newObservation = null;
    for (Obs newObs : newList) {
        if (!oldList.contains(newObs) && !newObs.isObsGrouping()) {
            newObservation = newObs;
        }
    }
    Assert.assertEquals(1, newObservation.getValueNumeric().intValue());
}

Example 48 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method parseObs_shouldAddCommentsToAnObservationGroup.

/**
 * @see ORUR01Handler#parseObs(Encounter,OBX,OBR,String)
 */
@Test
public void parseObs_shouldAddCommentsToAnObservationGroup() throws Exception {
    ObsService os = Context.getObsService();
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||7^^^^||Collet^Test^Chebaskwony||\r" + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||23^FOOD CONSTRUCT^99DCT\r" + "NTE|1|L|This is a comment\r" + "OBX|1|NM|5497^CD4, BY FACS^99DCT||1|||||||||20080206\r" + "NTE|1|L|This should not be considered :-)";
    List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(23));
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
    List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(23));
    Obs newObservation = null;
    for (Obs newObs : newList) {
        if (!oldList.contains(newObs) && newObs.isObsGrouping()) {
            newObservation = newObs;
        }
    }
    Assert.assertEquals("This is a comment", newObservation.getComment());
}

Example 49 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldPreferFormUuidOverIdIfBothArePresent.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldPreferFormUuidOverIdIfBothArePresent() throws Exception {
    // save original encounter count
    List<Encounter> encounters = Context.getEncounterService().getEncountersByPatient(new Patient(3));
    Integer originalEncounters = encounters.size();
    // process message
    String hl7String = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20090728170332||ORU^R01|gu99yBh4loLX2mh9cHaV|P|2.5|1||||||||4^AMRS.ELD.FORMID~c156e1a8-6731-4ebd-89ff-d0d1c45eb004^AMRS.ELD.FORMUUID\r" + "PID|||3^^^^||Beren^John^Bondo||\r" + "PV1||O|1^Unknown||||1^Super User (admin)|||||||||||||||||||||||||||||||||||||20090714|||||||V\r" + "ORC|RE||||||||20090728165937|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|2|NM|5497^CD4 COUNT^99DCT||123|||||||||20090714";
    Message hl7message = parser.parse(hl7String);
    router.processMessage(hl7message);
    // make sure an encounter was added
    encounters = Context.getEncounterService().getEncountersByPatient(new Patient(3));
    Assert.assertEquals(originalEncounters + 1, encounters.size());
    // get last encounter
    Encounter enc = encounters.get(encounters.size() - 1);
    // check the form uuid
    Form form = enc.getForm();
    Assert.assertEquals("c156e1a8-6731-4ebd-89ff-d0d1c45eb004", form.getUuid());
}

Example 50 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldCreateEncounterAndObsFromHl7Message.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldCreateEncounterAndObsFromHl7Message() throws Exception {
    ObsService obsService = Context.getObsService();
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||3^^^^||John3^Doe^||\r" + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|1|NM|5497^CD4, BY FACS^99DCT||450|||||||||20080206\r" + "OBX|2|DT|5096^RETURN VISIT DATE^99DCT||20080229|||||||||20080212";
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
    Patient patient = new Patient(3);
    // check for an encounter
    List<Encounter> encForPatient3 = Context.getEncounterService().getEncountersByPatient(patient);
    assertNotNull(encForPatient3);
    assertTrue("There should be an encounter created", encForPatient3.size() == 1);
    // check for any obs
    List<Obs> obsForPatient3 = obsService.getObservationsByPerson(patient);
    assertNotNull(obsForPatient3);
    assertTrue("There should be some obs created for #3", obsForPatient3.size() > 0);
    // check for the return visit date obs
    Concept returnVisitDateConcept = new Concept(5096);
    Calendar cal = Calendar.getInstance();
    cal.set(2008, Calendar.FEBRUARY, 29, 0, 0, 0);
    Date returnVisitDate = cal.getTime();
    List<Obs> returnVisitDateObsForPatient3 = obsService.getObservationsByPersonAndConcept(patient, returnVisitDateConcept);
    assertEquals("There should be a return visit date", 1, returnVisitDateObsForPatient3.size());
    Obs firstObs = (Obs) returnVisitDateObsForPatient3.toArray()[0];
    cal.setTime(firstObs.getValueDatetime());
    Date firstObsValueDatetime = cal.getTime();
    assertEquals("The date should be the 29th", returnVisitDate.toString(), firstObsValueDatetime.toString());
}