Examples with OBX ca.uhn.hl7v2.model.v25.segment.OBX used on opensource projects

Example 51 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldFailIfQuestionDatatypeIsCodedAndABooleanIsNotAValidAnswer.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test(expected = ApplicationException.class)
public void processMessage_shouldFailIfQuestionDatatypeIsCodedAndABooleanIsNotAValidAnswer() throws Exception {
    GlobalProperty trueConceptGlobalProperty = new GlobalProperty(OpenmrsConstants.GLOBAL_PROPERTY_TRUE_CONCEPT, "7", "Concept id of the concept defining the TRUE boolean concept");
    GlobalProperty falseConceptGlobalProperty = new GlobalProperty(OpenmrsConstants.GLOBAL_PROPERTY_FALSE_CONCEPT, "8", "Concept id of the concept defining the TRUE boolean concept");
    Context.getAdministrationService().saveGlobalProperty(trueConceptGlobalProperty);
    Context.getAdministrationService().saveGlobalProperty(falseConceptGlobalProperty);
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||7^^^^||Collet^Test^Chebaskwony||\r" + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|2|NM|4^CIVIL STATUS^99DCT||1|||||||||20080206";
    Assert.assertEquals("Coded", Context.getConceptService().getConcept(4).getDatatype().getName());
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
}

Example 52 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldNotCreateProblemListObservationWithConceptProposals.

/**
 * Tests that a ConceptProposal row can be written by the processor
 *
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldNotCreateProblemListObservationWithConceptProposals() throws Exception {
    ObsService obsService = Context.getObsService();
    ConceptService conceptService = Context.getConceptService();
    EncounterService encService = Context.getEncounterService();
    String hl7String = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080630094800||ORU^R01|kgWdFt0SVwwClOfJm3pe|P|2.5|1||||||||15^AMRS.ELD.FORMID\r" + "PID|||3^^^^~d3811480^^^^||John3^Doe^||\r" + "PV1||O|1^Unknown||||1^Super User (admin)|||||||||||||||||||||||||||||||||||||20080208|||||||V\r" + "ORC|RE||||||||20080208000000|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBR|1|||1284^PROBLEM LIST^99DCT\r" + "OBX|1|CWE|6042^PROBLEM ADDED^99DCT||PROPOSED^SEVERO DOLOR DE CABEZA^99DCT|||||||||20080208";
    Message hl7message = parser.parse(hl7String);
    router.processMessage(hl7message);
    Patient patient = new Patient(3);
    // check for any obs
    assertEquals("There should not be any obs created for #3", 0, obsService.getObservationsByPerson(patient).size());
    // check for a new encounter
    assertEquals("There should be 1 new encounter created for #3", 1, encService.getEncountersByPatient(patient).size());
    // check for the proposed concept
    List<ConceptProposal> proposedConcepts = conceptService.getConceptProposals("SEVERO DOLOR DE CABEZA");
    assertEquals("There should be a proposed concept by this name", 1, proposedConcepts.size());
    assertEquals(encService.getEncountersByPatient(patient).get(0), proposedConcepts.get(0).getEncounter());
}

Example 53 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method parseObs_shouldAddMultipleCommentsForAnObservationAsOneComment.

/**
 * @see ORUR01Handler#parseObs(Encounter,OBX,OBR,String)
 */
@Test
public void parseObs_shouldAddMultipleCommentsForAnObservationAsOneComment() throws Exception {
    ObsService os = Context.getObsService();
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||7^^^^||Collet^Test^Chebaskwony||\r" + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|1|NM|5497^CD4, BY FACS^99DCT||1|||||||||20080206\r" + "NTE|1|L|This is a comment\r" + "NTE|2|L|that spans two lines\r" + "OBX|2|NM|5497^CD4, BY FACS^99DCT||2|||||||||20080206";
    // the expected question for the obs in the hl7 message has to be
    // numeric
    Assert.assertEquals("Numeric", Context.getConceptService().getConcept(5497).getDatatype().getName());
    List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
    List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
    // get the new observation with a not-null comment; not interested in
    // the other one
    Obs newObservation = null;
    int thisIndex = 0;
    while (newObservation == null && thisIndex < newList.size()) {
        Obs newObs = newList.get(thisIndex++);
        if (!oldList.contains(newObs) && !newObs.isObsGrouping() && newObs.getComment() != null)
            newObservation = newObs;
    }
    Assert.assertEquals("This is a comment that spans two lines", newObservation.getComment());
}

Example 54 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldCreateBasicConceptProposal.

/**
 * Should create a concept proposal because of the key string in the message
 *
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldCreateBasicConceptProposal() throws Exception {
    // remember initial occurrence of proposal's text in the model
    int initialOccurrences = Context.getConceptService().getConceptProposals("PELVIC MASS").size();
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080924022306||ORU^R01|Z185fTD0YozQ5kvQZD7i|P|2.5|1||||||||3^AMRS.ELD.FORMID\r" + "PID|||7^^^^||Joe^S^Mith||\r" + "PV1||O|1^Unknown Module 2||||1^Joe (1-1)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080219085345|1^Joe\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|18|DT|5096^RETURN VISIT DATE^99DCT||20080506|||||||||20080212\r" + "OBR|19|||1284^PROBLEM LIST^99DCT\r" + "OBX|1|CWE|6042^PROBLEM ADDED^99DCT||PROPOSED^PELVIC MASS^99DCT|||||||||20080212";
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
    // make sure that the proposal was added
    Assert.assertEquals("Processing of the HL7 message did not result in the new proposal being added to the model", initialOccurrences + 1, Context.getConceptService().getConceptProposals("PELVIC MASS").size());
}

Example 55 with OBX

use of ca.uhn.hl7v2.model.v25.segment.OBX in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldFailOnEmptyConceptAnswers.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test(expected = ApplicationException.class)
public void processMessage_shouldFailOnEmptyConceptAnswers() throws Exception {
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080630094800||ORU^R01|kgWdFt0SVwwClOfJm3pe|P|2.5|1||||||||15^AMRS.ELD.FORMID\r" + "PID|||3^^^^~d3811480^^^^||John3^Doe^||\r" + "PV1||O|1^Unknown||||1^Super User (admin)|||||||||||||||||||||||||||||||||||||20080208|||||||V\r" + "ORC|RE||||||||20080208000000|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|1|CWE|5497^CD4, BY FACS^99DCT||^^99DCT|||||||||20080208";
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
}