use of cbit.vcell.client.constants.ApplicationActionCommand in project vcell by virtualcell.
the class BioModelEditor method popupMenuActionPerformed.
@Override
protected void popupMenuActionPerformed(DocumentEditorPopupMenuAction action, String actionCommand) {
Model model = bioModel.getModel();
final SimulationContext selectedSimulationContext = getSelectedSimulationContext();
switch(action) {
case add_new:
try {
Object obj = documentEditorTree.getLastSelectedPathComponent();
if (obj == null || !(obj instanceof BioModelNode)) {
return;
}
BioModelNode selectedNode = (BioModelNode) obj;
Object userObject = selectedNode.getUserObject();
if (userObject instanceof DocumentEditorTreeFolderNode) {
DocumentEditorTreeFolderClass folderClass = ((DocumentEditorTreeFolderNode) userObject).getFolderClass();
Object newObject = null;
switch(folderClass) {
case REACTIONS_NODE:
// TODO: should add a Add New Rule menu item
newObject = model.createSimpleReaction(model.getStructure(0));
break;
case STRUCTURES_NODE:
newObject = model.createFeature();
break;
case SPECIES_NODE:
newObject = model.createSpeciesContext(model.getStructure(0));
break;
case MOLECULAR_TYPES_NODE:
MolecularType mt = model.getRbmModelContainer().createMolecularType();
model.getRbmModelContainer().addMolecularType(mt, true);
newObject = mt;
break;
case OBSERVABLES_NODE:
if (bioModel.getModel().getRbmModelContainer().getMolecularTypeList().isEmpty()) {
PopupGenerator.showInfoDialog(this, VCellErrorMessages.MustBeRuleBased);
return;
}
RbmObservable o = model.getRbmModelContainer().createObservable(RbmObservable.ObservableType.Molecules);
model.getRbmModelContainer().addObservable(o);
SpeciesPattern sp = new SpeciesPattern();
o.addSpeciesPattern(sp);
newObject = o;
break;
case SIMULATIONS_NODE:
if (selectedSimulationContext != null) {
AsynchClientTask task1 = new AsynchClientTask("new simulation", AsynchClientTask.TASKTYPE_NONSWING_BLOCKING) {
@Override
public void run(Hashtable<String, Object> hashTable) throws Exception {
MathMappingCallback callback = new MathMappingCallbackTaskAdapter(getClientTaskStatusSupport());
selectedSimulationContext.refreshMathDescription(callback, NetworkGenerationRequirements.AllowTruncatedStandardTimeout);
}
};
AsynchClientTask task2 = new AsynchClientTask("new simulation", AsynchClientTask.TASKTYPE_SWING_BLOCKING) {
@Override
public void run(Hashtable<String, Object> hashTable) throws Exception {
MathMappingCallback callback = new MathMappingCallbackTaskAdapter(getClientTaskStatusSupport());
Object newsim = selectedSimulationContext.addNewSimulation(SimulationOwner.DEFAULT_SIM_NAME_PREFIX, callback, NetworkGenerationRequirements.AllowTruncatedStandardTimeout);
selectionManager.setSelectedObjects(new Object[] { newsim });
}
};
ClientTaskDispatcher.dispatch(this, new Hashtable<String, Object>(), new AsynchClientTask[] { task1, task2 });
}
break;
default:
break;
}
if (newObject != null) {
selectionManager.setSelectedObjects(new Object[] { newObject });
}
}
} catch (Exception ex) {
DialogUtils.showErrorDialog(this, ex.getMessage());
}
break;
case add_new_app_deterministic:
newApplication(Application.NETWORK_DETERMINISTIC);
break;
case add_new_app_stochastic:
newApplication(Application.NETWORK_STOCHASTIC);
break;
case add_new_app_rulebased:
{
// if(model.getStructures().length > 1) {
// DialogUtils.showErrorDialog(this, VCellErrorMessages.NFSimAppNotAllowedForMultipleStructures);
// return;
// }
newApplication(Application.RULE_BASED_STOCHASTIC);
break;
}
case copy_app:
ApplicationActionCommand acc = ApplicationActionCommand.lookup(actionCommand);
switch(acc.actionType()) {
case COPY_AS_IS:
copyApplication();
break;
case COPY_CHANGE:
boolean bothSpatial = acc.isSourceSpatial() && acc.isDestSpatial();
// if(acc.getAppType().equals(SimulationContext.Application.RULE_BASED_STOCHASTIC) && model.getStructures().length > 1) {
// DialogUtils.showErrorDialog(this, VCellErrorMessages.NFSimAppNotAllowedForMultipleStructures);
// return;
// }
copyApplication(bothSpatial, acc.getAppType());
break;
case CREATE:
// not used in this menu
throw new UnsupportedOperationException();
}
break;
case app_new_biomodel:
if (actionCommand.equals(GuiConstants.MENU_TEXT_APP_NEWBIOMODEL)) {
createNewBiomodelFromApp();
}
break;
case delete:
try {
if (selectedSimulationContext != null) {
String confirm = PopupGenerator.showOKCancelWarningDialog(this, "Deleting application", "You are going to delete the Application '" + selectedSimulationContext.getName() + "'. Continue?");
if (confirm.equals(UserMessage.OPTION_CANCEL)) {
return;
}
deleteSimulationcontexts(new SimulationContext[] { selectedSimulationContext });
}
} catch (Exception ex) {
DialogUtils.showErrorDialog(this, ex.getMessage());
}
break;
case deleteChoose:
try {
SimulationContext[] allSimContexts = Arrays.copyOf(getBioModelWindowManager().getVCDocument().getSimulationContexts(), getBioModelWindowManager().getVCDocument().getSimulationContexts().length);
Arrays.sort(allSimContexts, new Comparator<SimulationContext>() {
@Override
public int compare(SimulationContext o1, SimulationContext o2) {
return o1.getName().compareToIgnoreCase(o2.getName());
}
});
String[][] rowDataOrig = new String[allSimContexts.length][2];
for (int i = 0; i < allSimContexts.length; i++) {
rowDataOrig[i][0] = allSimContexts[i].getName();
rowDataOrig[i][1] = allSimContexts[i].getSimulations().length + "";
}
final String DELETE = "Delete";
final String CANCEL = "Cancel";
TableListResult result = DialogUtils.showComponentOptionsTableList(this, "Select Applications (and associated Simulations) to delete.", new String[] { "Application", "# of Sims" }, rowDataOrig, ListSelectionModel.MULTIPLE_INTERVAL_SELECTION, null, new String[] { DELETE, CANCEL }, CANCEL, null);
if (result != null && result.selectedOption != null && result.selectedOption.equals(DELETE) && result.selectedTableRows != null && result.selectedTableRows.length > 0) {
ArrayList<SimulationContext> deleteTheseSimcontexts = new ArrayList<SimulationContext>();
for (int i = 0; i < result.selectedTableRows.length; i++) {
deleteTheseSimcontexts.add(allSimContexts[result.selectedTableRows[i]]);
}
deleteSimulationcontexts(deleteTheseSimcontexts.toArray(new SimulationContext[0]));
}
} catch (Exception ex) {
DialogUtils.showErrorDialog(this, ex.getMessage());
}
break;
default:
break;
}
}
use of cbit.vcell.client.constants.ApplicationActionCommand in project vcell by virtualcell.
the class BioModelEditorApplicationsPanel method applicationMenuItem_ActionPerformed.
public void applicationMenuItem_ActionPerformed(java.awt.event.ActionEvent e) {
String actionCommand = e.getActionCommand();
ApplicationActionCommand acc = ApplicationActionCommand.lookup(actionCommand);
switch(acc.actionType()) {
case CREATE:
newApplication(e, acc.getAppType());
break;
case COPY_AS_IS:
copyApplication();
break;
case COPY_CHANGE:
boolean bothSpatial = acc.isSourceSpatial() && acc.isDestSpatial();
copyApplication(bothSpatial, acc.getAppType());
break;
}
}
Aggregations