Examples with NodeInfo cbit.xml.merge.NodeInfo used on opensource projects

Example 1 with NodeInfo

use of cbit.xml.merge.NodeInfo in project vcell by virtualcell.

the class MyRenderer method getTreeCellRendererComponent.

/**
 * This method modifies the way the nodes are represented upon their status and type.
 * Creation date: (7/27/2000 6:41:57 PM)
 * @return java.awt.Component
 */
public java.awt.Component getTreeCellRendererComponent(JTree tree, Object value, boolean sel, boolean expanded, boolean leaf, int row, boolean hasFocus) {
    JLabel component = (JLabel) super.getTreeCellRendererComponent(tree, value, sel, expanded, leaf, row, hasFocus);
    // 
    if (value instanceof NodeInfo) {
        NodeInfo nodeInfo = (NodeInfo) value;
        // Check the kind of node to decide which icon to use
        if (nodeInfo.isAttribute()) {
            switch(nodeInfo.getStatus()) {
                case NodeInfo.STATUS_NORMAL:
                    component.setIcon(this.fieldAttributeIcon);
                    setToolTipText(null);
                    break;
                case NodeInfo.STATUS_NEW:
                    component.setIcon(this.fieldNewAttributeIcon);
                    component.setForeground(java.awt.Color.blue);
                    setToolTipText("New " + nodeInfo.getName());
                    break;
                case NodeInfo.STATUS_REMOVED:
                    component.setIcon(this.fieldRemovedAttributeIcon);
                    component.setForeground(java.awt.Color.red);
                    setToolTipText("Removed " + nodeInfo.getName());
                    break;
                case NodeInfo.STATUS_CHANGED:
                    component.setIcon(this.fieldChangedAttributeIcon);
                    component.setForeground(java.awt.Color.gray);
                    setToolTipText("Altered " + nodeInfo.getName());
                    break;
                default:
                    component.setIcon(this.fieldBadAttributeIcon);
                    setToolTipText(null);
            }
        } else {
            // is an element
            switch(nodeInfo.getStatus()) {
                case NodeInfo.STATUS_NORMAL:
                    component.setIcon(this.fieldFolderIcon);
                    setToolTipText(null);
                    break;
                case NodeInfo.STATUS_NEW:
                    component.setIcon(this.fieldNewFolderIcon);
                    component.setForeground(java.awt.Color.blue);
                    setToolTipText("New " + nodeInfo.getName());
                    break;
                case NodeInfo.STATUS_REMOVED:
                    component.setIcon(this.fieldRemovedFolderIcon);
                    component.setForeground(java.awt.Color.red);
                    setToolTipText("Removed " + nodeInfo.getName());
                    break;
                case NodeInfo.STATUS_CHANGED:
                    component.setIcon(this.fieldChangedFolderIcon);
                    component.setForeground(java.awt.Color.gray);
                    setToolTipText("Altered " + nodeInfo.getName());
                    break;
                default:
                    component.setIcon(this.fieldBadFolderIcon);
                    setToolTipText(null);
            }
        }
    }
    return component;
}

Example 2 with NodeInfo

use of cbit.xml.merge.NodeInfo in project vcell by virtualcell.

the class TMLPanel method extract.

/**
 * This method extracts from the given NodeInfo node, the nodes with the given status.
 * Creation date: (9/12/2001 4:40:12 PM)
 * @return cbit.xml.merge.NodeInfo
 * @param originalNode cbit.xml.merge.NodeInfo
 * @param status int
 */
private NodeInfo extract(NodeInfo original, int status) {
    NodeInfo newNode = null;
    if ((original.getName().equals(XMLTags.VersionTag) || original.getName().equals(XMLTags.KeyValueAttrTag)) && fieldDiffTree.isIgnoringVersionInfo()) {
        if (status == NodeInfo.STATUS_REMOVED) {
            // i.e. represents the baseline
            status = NodeInfo.STATUS_NORMAL;
            newNode = new NodeInfo(original.getName(), original.getValue(), status, original.isAttribute());
        } else if (status == NodeInfo.STATUS_NEW) {
            // i.e. represents the modified
            // ignore version info for the modified
            newNode = null;
        }
    } else {
        // process himself
        if (original.getStatus() == NodeInfo.STATUS_CHANGED) {
            // create the copy
            if (status == NodeInfo.STATUS_REMOVED) {
                newNode = new NodeInfo(original.getName(), original.getValue(), status, original.isAttribute());
            } else {
                if (status == NodeInfo.STATUS_NEW) {
                    newNode = new NodeInfo(original.getName(), ((ChangedNodeInfo) original).getModified(), status, original.isAttribute());
                } else {
                    throw new IllegalArgumentException("Invalid option: " + status);
                }
            }
        } else {
            if (original.getStatus() == status || original.getStatus() == NodeInfo.STATUS_NORMAL || original.getStatus() == NodeInfo.STATUS_PROBLEM) {
                newNode = new NodeInfo(original.getName(), original.getValue(), status, original.isAttribute());
            }
        }
    }
    // Now process its children
    if (newNode != null) {
        Enumeration enum1 = original.children();
        // copy children
        while (enum1.hasMoreElements()) {
            NodeInfo temp = extract((NodeInfo) enum1.nextElement(), status);
            if (temp != null) {
                newNode.add(temp);
            }
        }
    }
    return newNode;
}

Example 3 with NodeInfo

use of cbit.xml.merge.NodeInfo in project vcell by virtualcell.

the class TMLPanel method setNodeInfo.

/**
 * Sets the nodeInfo property (cbit.xml.merge.NodeInfo) value.
 * @param nodeInfo The new value for the property.
 * @see #getNodeInfo
 */
private void setNodeInfo(NodeInfo nodeInfo) {
    NodeInfo oldValue = fieldNodeInfo;
    fieldNodeInfo = nodeInfo;
    getTree().getSelectionModel().setSelectionMode(TreeSelectionModel.DISCONTIGUOUS_TREE_SELECTION);
    if (nodeInfo != null) {
        getTree().setModel(new DefaultTreeModel(getNodeInfo(), false));
    } else {
        getTree().setModel(null);
    }
    firePropertyChange("nodeInfo", oldValue, nodeInfo);
}

Example 4 with NodeInfo

use of cbit.xml.merge.NodeInfo in project vcell by virtualcell.

the class TMLPanel method keepModified.

/**
 * This method processes the subnodes of the given Node so that it keeps the Modified remaining nodes.
 * Creation date: (9/11/2001 4:55:11 PM)
 * @param object java.lang.Object
 */
private void keepModified(Object object) {
    if (object instanceof NodeInfo) {
        NodeInfo currentNode = (NodeInfo) object;
        if (currentNode.getStatus() != NodeInfo.STATUS_REMOVED) {
            // process himself
            currentNode.setStatus(NodeInfo.STATUS_NORMAL);
            if (currentNode instanceof ChangedNodeInfo) {
                String temp = ((ChangedNodeInfo) currentNode).getValue();
                ((ChangedNodeInfo) currentNode).setValue(((ChangedNodeInfo) currentNode).getModified());
                ((ChangedNodeInfo) currentNode).setModified(temp);
            }
            ((javax.swing.tree.DefaultTreeModel) (getTree().getModel())).nodeChanged(currentNode);
            // process its subnodes
            LinkedList subNodes = new LinkedList();
            for (Enumeration enumNodes = currentNode.children(); enumNodes.hasMoreElements(); ) {
                subNodes.add(enumNodes.nextElement());
            }
            Iterator iterator = subNodes.iterator();
            while (iterator.hasNext()) {
                NodeInfo tempNode = (NodeInfo) iterator.next();
                keepModified(tempNode);
            }
            // update parents of the change
            updateParents(currentNode.getParent(), currentNode);
        } else {
            NodeInfo parentNode = currentNode;
            // track the farest parent who has as a status of REMOVED
            while ((parentNode.getParent() != null) && (((NodeInfo) parentNode.getParent()).getStatus() == NodeInfo.STATUS_REMOVED)) {
                parentNode = (NodeInfo) parentNode.getParent();
            }
            // update parents of the change
            updateParents(parentNode, currentNode);
            // eliminate that node and its subtree (remove the node of interest, not the parent one).
            ((DefaultTreeModel) (getTree().getModel())).removeNodeFromParent(currentNode);
        }
    } else {
        throw new IllegalArgumentException("KeepModified found an unknown type of node:" + object.getClass().getName());
    }
}

Example 5 with NodeInfo

use of cbit.xml.merge.NodeInfo in project vcell by virtualcell.

the class TMLPanel method processComparisonResult.

// process events for loading the model displayed in the comparison panel
public VCDocument processComparisonResult() throws Exception {
    try {
        NodeInfo root = (NodeInfo) getTree().getModel().getRoot();
        // if (!isNormal(root)) {
        // displayMessage(this, "Please resolve all tagged elements/attributes before proceeding.");
        // }
        String xmlStr = root.toXmlString();
        // System.out.println(xmlStr);
        Element rootElement = (XmlUtil.stringToXML(xmlStr, null)).getRootElement();
        // ?
        XmlReader reader = new XmlReader(true);
        String rootName = rootElement.getName();
        Document doc = rootElement.getDocument();
        VCDocument vcDoc = null;
        if (rootName.equals(XMLTags.BioModelTag)) {
            String docSoftwareVersion = rootElement.getAttributeValue(XMLTags.SoftwareVersionAttrTag);
            vcDoc = reader.getBioModel(rootElement, (docSoftwareVersion == null ? null : VCellSoftwareVersion.fromString(docSoftwareVersion)));
        } else if (rootName.equals(XMLTags.MathModelTag)) {
            vcDoc = reader.getMathModel(rootElement);
        } else if (rootName.equals(XMLTags.GeometryTag)) {
            vcDoc = reader.getGeometry(rootElement);
        } else {
            throw new Exception("Invalid root for the tree");
        }
        return vcDoc;
    } catch (java.lang.Exception ivjExc) {
        handleException(ivjExc);
        throw ivjExc;
    }
}