Examples with DoubleDBIDListIter de.lmu.ifi.dbs.elki.database.ids.DoubleDBIDListIter used on opensource projects

Example 1 with DoubleDBIDListIter

use of de.lmu.ifi.dbs.elki.database.ids.DoubleDBIDListIter in project elki by elki-project.

the class GeoIndexing method main.

public static void main(String[] args) {
    // Set the logging level to statistics:
    LoggingConfiguration.setStatistics();
    // Generate a random data set.
    Random rand = new Random(0L);
    // Note: ELKI has a nice data generator class, use that instead.
    double[][] data = new double[100000][];
    for (int i = 0; i < data.length; i++) {
        data[i] = randomLatitudeLongitude(rand);
    }
    // Adapter to load data from an existing array.
    DatabaseConnection dbc = new ArrayAdapterDatabaseConnection(data);
    // Since the R-tree has so many options, it is a bit easier to configure it
    // using the parameterization API, which handles defaults, instantiation,
    // and additional constraint checks.
    RStarTreeFactory<?> indexfactory = // 
    new ELKIBuilder<>(RStarTreeFactory.class).with(AbstractPageFileFactory.Parameterizer.PAGE_SIZE_ID, // 
    512).with(RStarTreeFactory.Parameterizer.BULK_SPLIT_ID, // 
    SortTileRecursiveBulkSplit.class).build();
    // Create the database, and initialize it.
    Database db = new StaticArrayDatabase(dbc, Arrays.asList(indexfactory));
    // This will build the index of the database.
    db.initialize();
    // Relation containing the number vectors we put in above:
    Relation<NumberVector> rel = db.getRelation(TypeUtil.NUMBER_VECTOR_FIELD);
    // We can use this to identify rows of the input data below.
    DBIDRange ids = (DBIDRange) rel.getDBIDs();
    // For all indexes, dump their statistics.
    for (It<Index> it = db.getHierarchy().iterDescendants(db).filter(Index.class); it.valid(); it.advance()) {
        it.get().logStatistics();
    }
    // We use the WGS84 earth model, and "latitude, longitude" coordinates:
    // This distance function returns meters.
    LatLngDistanceFunction df = new LatLngDistanceFunction(WGS84SpheroidEarthModel.STATIC);
    // k nearest neighbor query:
    KNNQuery<NumberVector> knnq = QueryUtil.getKNNQuery(rel, df);
    // Let's find the closest points to New York:
    DoubleVector newYork = DoubleVector.wrap(new double[] { 40.730610, -73.935242 });
    KNNList knns = knnq.getKNNForObject(newYork, 10);
    // Iterate over all results.
    System.out.println("Close to New York:");
    for (DoubleDBIDListIter it = knns.iter(); it.valid(); it.advance()) {
        // To kilometers
        double km = it.doubleValue() / 1000;
        System.out.println(rel.get(it) + " distance: " + km + " km row: " + ids.getOffset(it));
    }
    // Many other indexes will fail if we search close to the date line.
    DoubleVector tuvalu = DoubleVector.wrap(new double[] { -7.4784205, 178.679924 });
    knns = knnq.getKNNForObject(tuvalu, 10);
    // Iterate over all results.
    System.out.println("Close to Tuvalu:");
    for (DoubleDBIDListIter it = knns.iter(); it.valid(); it.advance()) {
        // To kilometers
        double km = it.doubleValue() / 1000;
        System.out.println(rel.get(it) + " distance: " + km + " km row: " + ids.getOffset(it));
    }
    // the distances to a few points in the data set.
    for (It<Index> it = db.getHierarchy().iterDescendants(db).filter(Index.class); it.valid(); it.advance()) {
        it.get().logStatistics();
    }
}

Example 2 with DoubleDBIDListIter

use of de.lmu.ifi.dbs.elki.database.ids.DoubleDBIDListIter in project elki by elki-project.

the class DoubleIntegerDBIDList method toString.

@Override
public String toString() {
    StringBuilder buf = new StringBuilder(20 + size * 20).append("DoubleDBIDList[");
    for (DoubleDBIDListIter iter = this.iter(); iter.valid(); ) {
        buf.append(iter.doubleValue()).append(':').append(iter.internalGetIndex());
        iter.advance();
        if (iter.valid()) {
            buf.append(',');
        }
    }
    return buf.append(']').toString();
}

Example 3 with DoubleDBIDListIter

use of de.lmu.ifi.dbs.elki.database.ids.DoubleDBIDListIter in project elki by elki-project.

the class DoubleIntegerDBIDKNNList method toString.

@Override
public String toString() {
    StringBuilder buf = new StringBuilder();
    buf.append("kNNList[");
    for (DoubleDBIDListIter iter = this.iter(); iter.valid(); ) {
        buf.append(iter.doubleValue()).append(':').append(iter.internalGetIndex());
        iter.advance();
        if (iter.valid()) {
            buf.append(',');
        }
    }
    buf.append(']');
    return buf.toString();
}

Example 4 with DoubleDBIDListIter

use of de.lmu.ifi.dbs.elki.database.ids.DoubleDBIDListIter in project elki by elki-project.

the class DoubleIntegerDBIDListKNNHeap method toString.

@Override
public String toString() {
    StringBuilder buf = new StringBuilder();
    buf.append("kNNListHeap[");
    for (DoubleDBIDListIter iter = this.iter(); iter.valid(); ) {
        buf.append(iter.doubleValue()).append(':').append(iter.internalGetIndex());
        iter.advance();
        if (iter.valid()) {
            buf.append(',');
        }
    }
    buf.append(']');
    return buf.toString();
}

Example 5 with DoubleDBIDListIter

use of de.lmu.ifi.dbs.elki.database.ids.DoubleDBIDListIter in project elki by elki-project.

the class DoubleIntegerDBIDPairList method toString.

@Override
public String toString() {
    StringBuilder buf = new StringBuilder();
    buf.append("kNNList[");
    for (DoubleDBIDListIter iter = this.iter(); iter.valid(); ) {
        buf.append(iter.doubleValue()).append(':').append(iter.internalGetIndex());
        iter.advance();
        if (iter.valid()) {
            buf.append(',');
        }
    }
    buf.append(']');
    return buf.toString();
}