Examples with DiseaseVariant de.symeda.sormas.api.disease.DiseaseVariant used on opensource projects

Example 1 with DiseaseVariant

use of de.symeda.sormas.api.disease.DiseaseVariant in project SORMAS-Project by hzi-braunschweig.

the class EventEditFragment method updateCustomizableEnumFields.

private void updateCustomizableEnumFields(FragmentEventEditLayoutBinding contentBinding) {
    // Disease variant
    DiseaseVariant selectedVariant = (DiseaseVariant) contentBinding.eventDiseaseVariant.getValue();
    List<DiseaseVariant> diseaseVariants = DatabaseHelper.getCustomizableEnumValueDao().getEnumValues(CustomizableEnumType.DISEASE_VARIANT, record.getDisease());
    diseaseVariantList.clear();
    diseaseVariantList.addAll(DataUtils.toItems(diseaseVariants));
    contentBinding.eventDiseaseVariant.setSpinnerData(diseaseVariantList);
    if (diseaseVariants.contains(selectedVariant)) {
        contentBinding.eventDiseaseVariant.setValue(selectedVariant);
    } else {
        contentBinding.eventDiseaseVariant.setValue(null);
    }
    contentBinding.eventDiseaseVariant.setVisibility(diseaseVariants.isEmpty() ? GONE : VISIBLE);
    // Specific risk
    SpecificRisk selectedRisk = (SpecificRisk) contentBinding.eventSpecificRisk.getValue();
    List<SpecificRisk> specificRisks = DatabaseHelper.getCustomizableEnumValueDao().getEnumValues(CustomizableEnumType.SPECIFIC_EVENT_RISK, record.getDisease());
    specificRiskList.clear();
    specificRiskList.addAll(DataUtils.toItems(specificRisks));
    contentBinding.eventSpecificRisk.setSpinnerData(specificRiskList);
    if (specificRisks.contains(selectedRisk)) {
        contentBinding.eventSpecificRisk.setValue(selectedRisk);
    } else {
        contentBinding.eventSpecificRisk.setValue(null);
    }
    contentBinding.eventSpecificRisk.setVisibility(specificRisks.isEmpty() ? GONE : VISIBLE);
}

Example 2 with DiseaseVariant

use of de.symeda.sormas.api.disease.DiseaseVariant in project SORMAS-Project by hzi-braunschweig.

the class CaseCreateForm method addFields.

@Override
protected void addFields() {
    NullableOptionGroup ogCaseOrigin = addField(CaseDataDto.CASE_ORIGIN, NullableOptionGroup.class);
    ogCaseOrigin.setRequired(true);
    TextField epidField = addField(CaseDataDto.EPID_NUMBER, TextField.class);
    epidField.setInvalidCommitted(true);
    style(epidField, ERROR_COLOR_PRIMARY);
    if (!FacadeProvider.getExternalSurveillanceToolFacade().isFeatureEnabled()) {
        TextField externalIdField = addField(CaseDataDto.EXTERNAL_ID, TextField.class);
        style(externalIdField, ERROR_COLOR_PRIMARY);
    } else {
        CheckBox dontShareCheckbox = addField(CaseDataDto.DONT_SHARE_WITH_REPORTING_TOOL, CheckBox.class);
        CaseFormHelper.addDontShareWithReportingTool(getContent(), () -> dontShareCheckbox, DONT_SHARE_WARNING_LOC);
    }
    addField(CaseDataDto.REPORT_DATE, DateField.class);
    ComboBox diseaseField = addDiseaseField(CaseDataDto.DISEASE, false, true);
    ComboBox diseaseVariantField = addField(CaseDataDto.DISEASE_VARIANT, ComboBox.class);
    diseaseVariantDetailsField = addField(CaseDataDto.DISEASE_VARIANT_DETAILS, TextField.class);
    diseaseVariantDetailsField.setVisible(false);
    diseaseVariantField.setNullSelectionAllowed(true);
    diseaseVariantField.setVisible(false);
    addField(CaseDataDto.DISEASE_DETAILS, TextField.class);
    NullableOptionGroup plagueType = addField(CaseDataDto.PLAGUE_TYPE, NullableOptionGroup.class);
    addField(CaseDataDto.DENGUE_FEVER_TYPE, NullableOptionGroup.class);
    addField(CaseDataDto.RABIES_TYPE, NullableOptionGroup.class);
    addCustomField(PersonDto.FIRST_NAME, String.class, TextField.class);
    addCustomField(PersonDto.LAST_NAME, String.class, TextField.class);
    if (showPersonSearchButton) {
        searchPersonButton = createPersonSearchButton(PERSON_SEARCH_LOC);
        getContent().addComponent(searchPersonButton, PERSON_SEARCH_LOC);
    }
    TextField nationalHealthIdField = addCustomField(PersonDto.NATIONAL_HEALTH_ID, String.class, TextField.class);
    TextField passportNumberField = addCustomField(PersonDto.PASSPORT_NUMBER, String.class, TextField.class);
    if (CountryHelper.isCountry(FacadeProvider.getConfigFacade().getCountryLocale(), CountryHelper.COUNTRY_CODE_GERMANY)) {
        nationalHealthIdField.setVisible(false);
    }
    if (CountryHelper.isInCountries(FacadeProvider.getConfigFacade().getCountryLocale(), CountryHelper.COUNTRY_CODE_GERMANY, CountryHelper.COUNTRY_CODE_FRANCE)) {
        passportNumberField.setVisible(false);
    }
    birthDateDay = addCustomField(PersonDto.BIRTH_DATE_DD, Integer.class, ComboBox.class);
    // @TODO: Done for nullselection Bug, fixed in Vaadin 7.7.3
    birthDateDay.setNullSelectionAllowed(true);
    birthDateDay.addStyleName(FORCE_CAPTION);
    birthDateDay.setInputPrompt(I18nProperties.getString(Strings.day));
    ComboBox birthDateMonth = addCustomField(PersonDto.BIRTH_DATE_MM, Integer.class, ComboBox.class);
    // @TODO: Done for nullselection Bug, fixed in Vaadin 7.7.3
    birthDateMonth.setNullSelectionAllowed(true);
    birthDateMonth.addItems(DateHelper.getMonthsInYear());
    birthDateMonth.setPageLength(12);
    birthDateMonth.addStyleName(FORCE_CAPTION);
    birthDateMonth.setInputPrompt(I18nProperties.getString(Strings.month));
    setItemCaptionsForMonths(birthDateMonth);
    ComboBox birthDateYear = addCustomField(PersonDto.BIRTH_DATE_YYYY, Integer.class, ComboBox.class);
    birthDateYear.setCaption(I18nProperties.getPrefixCaption(PersonDto.I18N_PREFIX, PersonDto.BIRTH_DATE));
    // @TODO: Done for nullselection Bug, fixed in Vaadin 7.7.3
    birthDateYear.setNullSelectionAllowed(true);
    birthDateYear.addItems(DateHelper.getYearsToNow());
    birthDateYear.setItemCaptionMode(ItemCaptionMode.ID_TOSTRING);
    birthDateYear.setInputPrompt(I18nProperties.getString(Strings.year));
    birthDateDay.addValidator(e -> ControllerProvider.getPersonController().validateBirthDate((Integer) birthDateYear.getValue(), (Integer) birthDateMonth.getValue(), (Integer) e));
    birthDateMonth.addValidator(e -> ControllerProvider.getPersonController().validateBirthDate((Integer) birthDateYear.getValue(), (Integer) e, (Integer) birthDateDay.getValue()));
    birthDateYear.addValidator(e -> ControllerProvider.getPersonController().validateBirthDate((Integer) e, (Integer) birthDateMonth.getValue(), (Integer) birthDateDay.getValue()));
    // Update the list of days according to the selected month and year
    birthDateYear.addValueChangeListener(e -> {
        updateListOfDays((Integer) e.getProperty().getValue(), (Integer) birthDateMonth.getValue());
        birthDateMonth.markAsDirty();
        birthDateDay.markAsDirty();
    });
    birthDateMonth.addValueChangeListener(e -> {
        updateListOfDays((Integer) birthDateYear.getValue(), (Integer) e.getProperty().getValue());
        birthDateYear.markAsDirty();
        birthDateDay.markAsDirty();
    });
    birthDateDay.addValueChangeListener(e -> {
        birthDateYear.markAsDirty();
        birthDateMonth.markAsDirty();
    });
    ComboBox sex = addCustomField(PersonDto.SEX, Sex.class, ComboBox.class);
    sex.setCaption(I18nProperties.getCaption(Captions.Person_sex));
    ComboBox presentCondition = addCustomField(PersonDto.PRESENT_CONDITION, PresentCondition.class, ComboBox.class);
    presentCondition.setCaption(I18nProperties.getCaption(Captions.Person_presentCondition));
    addCustomField(SymptomsDto.ONSET_DATE, Date.class, DateField.class, I18nProperties.getPrefixCaption(SymptomsDto.I18N_PREFIX, SymptomsDto.ONSET_DATE));
    TextField phone = addCustomField(PersonDto.PHONE, String.class, TextField.class);
    phone.setCaption(I18nProperties.getCaption(Captions.Person_phone));
    TextField email = addCustomField(PersonDto.EMAIL_ADDRESS, String.class, TextField.class);
    email.setCaption(I18nProperties.getCaption(Captions.Person_emailAddress));
    phone.addValidator(new PhoneNumberValidator(I18nProperties.getValidationError(Validations.validPhoneNumber, phone.getCaption())));
    email.addValidator(new EmailValidator(I18nProperties.getValidationError(Validations.validEmailAddress, email.getCaption())));
    differentPlaceOfStayJurisdiction = addCustomField(DIFFERENT_PLACE_OF_STAY_JURISDICTION, Boolean.class, CheckBox.class);
    differentPlaceOfStayJurisdiction.addStyleName(VSPACE_3);
    Label placeOfStayHeadingLabel = new Label(I18nProperties.getCaption(Captions.casePlaceOfStay));
    placeOfStayHeadingLabel.addStyleName(H3);
    getContent().addComponent(placeOfStayHeadingLabel, PLACE_OF_STAY_HEADING_LOC);
    ComboBox region = addInfrastructureField(CaseDataDto.REGION);
    districtCombo = addInfrastructureField(CaseDataDto.DISTRICT);
    communityCombo = addInfrastructureField(CaseDataDto.COMMUNITY);
    communityCombo.setNullSelectionAllowed(true);
    // jurisdictionfields
    Label jurisdictionHeadingLabel = new Label(I18nProperties.getString(Strings.headingCaseResponsibleJurisidction));
    jurisdictionHeadingLabel.addStyleName(H3);
    getContent().addComponent(jurisdictionHeadingLabel, RESPONSIBLE_JURISDICTION_HEADING_LOC);
    ComboBox responsibleRegion = addInfrastructureField(CaseDataDto.RESPONSIBLE_REGION);
    responsibleRegion.setRequired(true);
    responsibleDistrictCombo = addInfrastructureField(CaseDataDto.RESPONSIBLE_DISTRICT);
    responsibleDistrictCombo.setRequired(true);
    responsibleCommunityCombo = addInfrastructureField(CaseDataDto.RESPONSIBLE_COMMUNITY);
    responsibleCommunityCombo.setNullSelectionAllowed(true);
    responsibleCommunityCombo.addStyleName(SOFT_REQUIRED);
    InfrastructureFieldsHelper.initInfrastructureFields(responsibleRegion, responsibleDistrictCombo, responsibleCommunityCombo);
    differentPointOfEntryJurisdiction = addCustomField(DIFFERENT_POINT_OF_ENTRY_JURISDICTION, Boolean.class, CheckBox.class);
    differentPointOfEntryJurisdiction.addStyleName(VSPACE_3);
    ComboBox pointOfEntryRegionCombo = addCustomField(POINT_OF_ENTRY_REGION, RegionReferenceDto.class, ComboBox.class);
    pointOfEntryDistrictCombo = addCustomField(POINT_OF_ENTRY_DISTRICT, DistrictReferenceDto.class, ComboBox.class);
    InfrastructureFieldsHelper.initInfrastructureFields(pointOfEntryRegionCombo, pointOfEntryDistrictCombo, null);
    pointOfEntryDistrictCombo.addValueChangeListener(e -> updatePOEs());
    if (showHomeAddressForm) {
        addHomeAddressForm();
    }
    FieldHelper.setVisibleWhen(differentPlaceOfStayJurisdiction, Arrays.asList(region, districtCombo, communityCombo), Collections.singletonList(Boolean.TRUE), true);
    FieldHelper.setVisibleWhen(differentPointOfEntryJurisdiction, Arrays.asList(pointOfEntryRegionCombo, pointOfEntryDistrictCombo), Collections.singletonList(Boolean.TRUE), true);
    FieldHelper.setRequiredWhen(differentPlaceOfStayJurisdiction, Arrays.asList(region, districtCombo), Collections.singletonList(Boolean.TRUE), false, null);
    ogCaseOrigin.addValueChangeListener(e -> {
        boolean pointOfEntryRegionDistrictVisible = CaseOrigin.POINT_OF_ENTRY.equals(ogCaseOrigin.getValue()) && Boolean.TRUE.equals(differentPointOfEntryJurisdiction.getValue());
        pointOfEntryRegionCombo.setVisible(pointOfEntryRegionDistrictVisible);
        pointOfEntryDistrictCombo.setVisible(pointOfEntryRegionDistrictVisible);
    });
    facilityOrHome = addCustomField(FACILITY_OR_HOME_LOC, TypeOfPlace.class, NullableOptionGroup.class, I18nProperties.getCaption(Captions.casePlaceOfStay));
    facilityOrHome.removeAllItems();
    for (TypeOfPlace place : TypeOfPlace.FOR_CASES) {
        facilityOrHome.addItem(place);
        facilityOrHome.setItemCaption(place, I18nProperties.getEnumCaption(place));
    }
    facilityOrHome.setItemCaptionMode(ItemCaptionMode.EXPLICIT);
    facilityOrHome.setId("facilityOrHome");
    facilityOrHome.setWidth(100, Unit.PERCENTAGE);
    CssStyles.style(facilityOrHome, ValoTheme.OPTIONGROUP_HORIZONTAL);
    facilityTypeGroup = ComboBoxHelper.createComboBoxV7();
    facilityTypeGroup.setId("typeGroup");
    facilityTypeGroup.setCaption(I18nProperties.getCaption(Captions.Facility_typeGroup));
    facilityTypeGroup.setWidth(100, Unit.PERCENTAGE);
    facilityTypeGroup.addItems(FacilityTypeGroup.getAccomodationGroups());
    getContent().addComponent(facilityTypeGroup, FACILITY_TYPE_GROUP_LOC);
    facilityType = ComboBoxHelper.createComboBoxV7();
    facilityType.setId("type");
    facilityType.setCaption(I18nProperties.getCaption(Captions.facilityType));
    facilityType.setWidth(100, Unit.PERCENTAGE);
    getContent().addComponent(facilityType, CaseDataDto.FACILITY_TYPE);
    facilityCombo = addInfrastructureField(CaseDataDto.HEALTH_FACILITY);
    facilityCombo.setImmediate(true);
    TextField facilityDetails = addField(CaseDataDto.HEALTH_FACILITY_DETAILS, TextField.class);
    facilityDetails.setVisible(false);
    ComboBox cbPointOfEntry = addInfrastructureField(CaseDataDto.POINT_OF_ENTRY);
    cbPointOfEntry.setImmediate(true);
    TextField tfPointOfEntryDetails = addField(CaseDataDto.POINT_OF_ENTRY_DETAILS, TextField.class);
    tfPointOfEntryDetails.setVisible(false);
    if (convertedTravelEntry != null) {
        differentPointOfEntryJurisdiction.setValue(true);
        RegionReferenceDto regionReferenceDto = convertedTravelEntry.getPointOfEntryRegion() != null ? convertedTravelEntry.getPointOfEntryRegion() : convertedTravelEntry.getResponsibleRegion();
        pointOfEntryRegionCombo.setValue(regionReferenceDto);
        DistrictReferenceDto districtReferenceDto = convertedTravelEntry.getPointOfEntryDistrict() != null ? convertedTravelEntry.getPointOfEntryDistrict() : convertedTravelEntry.getResponsibleDistrict();
        pointOfEntryDistrictCombo.setValue(districtReferenceDto);
        differentPointOfEntryJurisdiction.setReadOnly(true);
        pointOfEntryRegionCombo.setReadOnly(true);
        pointOfEntryDistrictCombo.setReadOnly(true);
        updatePOEs();
        cbPointOfEntry.setReadOnly(true);
        tfPointOfEntryDetails.setReadOnly(true);
        ogCaseOrigin.setReadOnly(true);
    }
    region.addValueChangeListener(e -> {
        RegionReferenceDto regionDto = (RegionReferenceDto) e.getProperty().getValue();
        FieldHelper.updateItems(districtCombo, regionDto != null ? FacadeProvider.getDistrictFacade().getAllActiveByRegion(regionDto.getUuid()) : null);
    });
    districtCombo.addValueChangeListener(e -> {
        FieldHelper.removeItems(communityCombo);
        DistrictReferenceDto districtDto = (DistrictReferenceDto) e.getProperty().getValue();
        FieldHelper.updateItems(communityCombo, districtDto != null ? FacadeProvider.getCommunityFacade().getAllActiveByDistrict(districtDto.getUuid()) : null);
        updateFacility();
        if (!Boolean.TRUE.equals(differentPointOfEntryJurisdiction.getValue())) {
            updatePOEs();
        }
    });
    communityCombo.addValueChangeListener(e -> {
        updateFacility();
    });
    facilityOrHome.addValueChangeListener(e -> {
        FieldHelper.removeItems(facilityCombo);
        if (TypeOfPlace.FACILITY.equals(facilityOrHome.getValue()) || ((facilityOrHome.getValue() instanceof java.util.Set) && TypeOfPlace.FACILITY.equals(facilityOrHome.getNullableValue()))) {
            if (facilityTypeGroup.getValue() == null) {
                facilityTypeGroup.setValue(FacilityTypeGroup.MEDICAL_FACILITY);
            }
            if (facilityType.getValue() == null && FacilityTypeGroup.MEDICAL_FACILITY.equals(facilityTypeGroup.getValue())) {
                facilityType.setValue(FacilityType.HOSPITAL);
            }
            if (facilityType.getValue() != null) {
                updateFacility();
            }
            if (CaseOrigin.IN_COUNTRY.equals(ogCaseOrigin.getValue())) {
                facilityCombo.setRequired(true);
            }
            updateFacilityFields(facilityCombo, facilityDetails);
        } else if (TypeOfPlace.HOME.equals(facilityOrHome.getValue()) || ((facilityOrHome.getValue() instanceof java.util.Set) && TypeOfPlace.HOME.equals(facilityOrHome.getNullableValue()))) {
            setNoneFacility();
        } else {
            facilityCombo.removeAllItems();
            facilityCombo.setValue(null);
            updateFacilityFields(facilityCombo, facilityDetails);
        }
    });
    facilityTypeGroup.addValueChangeListener(e -> {
        FieldHelper.removeItems(facilityCombo);
        FieldHelper.updateEnumData(facilityType, FacilityType.getAccommodationTypes((FacilityTypeGroup) facilityTypeGroup.getValue()));
    });
    facilityType.addValueChangeListener(e -> updateFacility());
    region.addItems(FacadeProvider.getRegionFacade().getAllActiveByServerCountry());
    JurisdictionLevel userJurisdictionLevel = UserRole.getJurisdictionLevel(UserProvider.getCurrent().getUserRoles());
    if (userJurisdictionLevel == JurisdictionLevel.HEALTH_FACILITY) {
        region.setReadOnly(true);
        responsibleRegion.setReadOnly(true);
        districtCombo.setReadOnly(true);
        responsibleDistrictCombo.setReadOnly(true);
        communityCombo.setReadOnly(true);
        responsibleCommunityCombo.setReadOnly(true);
        differentPlaceOfStayJurisdiction.setVisible(false);
        differentPlaceOfStayJurisdiction.setEnabled(false);
        facilityOrHome.setImmediate(true);
        // [FACILITY]
        facilityOrHome.setValue(Sets.newHashSet(TypeOfPlace.FACILITY));
        facilityOrHome.setReadOnly(true);
        facilityTypeGroup.setValue(FacilityTypeGroup.MEDICAL_FACILITY);
        facilityTypeGroup.setReadOnly(true);
        facilityType.setValue(FacilityType.HOSPITAL);
        facilityType.setReadOnly(true);
        facilityCombo.setValue(UserProvider.getCurrent().getUser().getHealthFacility());
        facilityCombo.setReadOnly(true);
    }
    if (!UserRole.isPortHealthUser(UserProvider.getCurrent().getUserRoles())) {
        ogCaseOrigin.addValueChangeListener(ev -> {
            if (ev.getProperty().getValue() == CaseOrigin.IN_COUNTRY) {
                setVisible(false, CaseDataDto.POINT_OF_ENTRY, CaseDataDto.POINT_OF_ENTRY_DETAILS);
                differentPointOfEntryJurisdiction.setVisible(false);
                setRequired(true, FACILITY_OR_HOME_LOC, FACILITY_TYPE_GROUP_LOC, CaseDataDto.FACILITY_TYPE, CaseDataDto.HEALTH_FACILITY);
                setRequired(false, CaseDataDto.POINT_OF_ENTRY);
                updateFacilityFields(facilityCombo, facilityDetails);
            } else {
                setVisible(true, CaseDataDto.POINT_OF_ENTRY);
                differentPointOfEntryJurisdiction.setVisible(true);
                setRequired(true, CaseDataDto.POINT_OF_ENTRY);
                if (userJurisdictionLevel != JurisdictionLevel.HEALTH_FACILITY) {
                    facilityOrHome.clear();
                    setRequired(false, FACILITY_OR_HOME_LOC, FACILITY_TYPE_GROUP_LOC, CaseDataDto.FACILITY_TYPE, CaseDataDto.HEALTH_FACILITY);
                }
                updatePointOfEntryFields(cbPointOfEntry, tfPointOfEntryDetails);
            }
        });
    }
    // jurisdiction field valuechangelisteners
    responsibleDistrictCombo.addValueChangeListener(e -> {
        Boolean differentPlaceOfStay = differentPlaceOfStayJurisdiction.getValue();
        if (!Boolean.TRUE.equals(differentPlaceOfStay)) {
            updateFacility();
            if (!Boolean.TRUE.equals(differentPointOfEntryJurisdiction.getValue())) {
                updatePOEs();
            }
        }
    });
    responsibleCommunityCombo.addValueChangeListener((e) -> {
        Boolean differentPlaceOfStay = differentPlaceOfStayJurisdiction.getValue();
        if (differentPlaceOfStay == null || Boolean.FALSE.equals(differentPlaceOfStay)) {
            updateFacility();
        }
    });
    differentPlaceOfStayJurisdiction.addValueChangeListener(e -> {
        updateFacility();
        if (!Boolean.TRUE.equals(differentPointOfEntryJurisdiction.getValue())) {
            updatePOEs();
        }
    });
    // Set initial visibilities & accesses
    initializeVisibilitiesAndAllowedVisibilities();
    setRequired(true, CaseDataDto.REPORT_DATE, PersonDto.FIRST_NAME, PersonDto.LAST_NAME, CaseDataDto.DISEASE, PersonDto.SEX, FACILITY_OR_HOME_LOC, FACILITY_TYPE_GROUP_LOC, CaseDataDto.FACILITY_TYPE);
    FieldHelper.addSoftRequiredStyle(plagueType, communityCombo, facilityDetails);
    FieldHelper.setVisibleWhen(getFieldGroup(), Arrays.asList(CaseDataDto.DISEASE_DETAILS), CaseDataDto.DISEASE, Arrays.asList(Disease.OTHER), true);
    FieldHelper.setRequiredWhen(getFieldGroup(), CaseDataDto.DISEASE, Arrays.asList(CaseDataDto.DISEASE_DETAILS), Arrays.asList(Disease.OTHER));
    FieldHelper.setRequiredWhen(getFieldGroup(), CaseDataDto.CASE_ORIGIN, Arrays.asList(CaseDataDto.HEALTH_FACILITY), Arrays.asList(CaseOrigin.IN_COUNTRY));
    FieldHelper.setRequiredWhen(getFieldGroup(), CaseDataDto.CASE_ORIGIN, Arrays.asList(CaseDataDto.POINT_OF_ENTRY), Arrays.asList(CaseOrigin.POINT_OF_ENTRY));
    FieldHelper.setVisibleWhen(getFieldGroup(), Arrays.asList(CaseDataDto.PLAGUE_TYPE), CaseDataDto.DISEASE, Arrays.asList(Disease.PLAGUE), true);
    FieldHelper.setVisibleWhen(getFieldGroup(), Arrays.asList(CaseDataDto.DENGUE_FEVER_TYPE), CaseDataDto.DISEASE, Arrays.asList(Disease.DENGUE), true);
    FieldHelper.setVisibleWhen(getFieldGroup(), Arrays.asList(CaseDataDto.RABIES_TYPE), CaseDataDto.DISEASE, Arrays.asList(Disease.RABIES), true);
    FieldHelper.setVisibleWhen(facilityOrHome, Arrays.asList(facilityTypeGroup, facilityType, facilityCombo), Collections.singletonList(TypeOfPlace.FACILITY), false);
    FieldHelper.setRequiredWhen(facilityOrHome, Arrays.asList(facilityTypeGroup, facilityType, facilityCombo), Collections.singletonList(TypeOfPlace.FACILITY), false, null);
    facilityCombo.addValueChangeListener(e -> {
        updateFacilityFields(facilityCombo, facilityDetails);
        this.getValue().setFacilityType((FacilityType) facilityType.getValue());
    });
    cbPointOfEntry.addValueChangeListener(e -> {
        updatePointOfEntryFields(cbPointOfEntry, tfPointOfEntryDetails);
    });
    addValueChangeListener(e -> {
        if (UserRole.isPortHealthUser(UserProvider.getCurrent().getUserRoles())) {
            setVisible(false, CaseDataDto.CASE_ORIGIN, CaseDataDto.DISEASE, CaseDataDto.COMMUNITY, CaseDataDto.HEALTH_FACILITY);
            setVisible(true, CaseDataDto.POINT_OF_ENTRY);
        }
    });
    diseaseField.addValueChangeListener((ValueChangeListener) valueChangeEvent -> {
        Disease disease = (Disease) valueChangeEvent.getProperty().getValue();
        List<DiseaseVariant> diseaseVariants = FacadeProvider.getCustomizableEnumFacade().getEnumValues(CustomizableEnumType.DISEASE_VARIANT, disease);
        FieldHelper.updateItems(diseaseVariantField, diseaseVariants);
        diseaseVariantField.setVisible(disease != null && isVisibleAllowed(CaseDataDto.DISEASE_VARIANT) && CollectionUtils.isNotEmpty(diseaseVariants));
    });
    diseaseVariantField.addValueChangeListener(e -> {
        DiseaseVariant diseaseVariant = (DiseaseVariant) e.getProperty().getValue();
        diseaseVariantDetailsField.setVisible(diseaseVariant != null && diseaseVariant.matchPropertyValue(DiseaseVariant.HAS_DETAILS, true));
    });
}

Example 3 with DiseaseVariant

use of de.symeda.sormas.api.disease.DiseaseVariant in project SORMAS-Project by hzi-braunschweig.

the class ContactsFilterForm method applyDependenciesOnNewValue.

@Override
protected void applyDependenciesOnNewValue(ContactCriteria newValue) {
    final RegionReferenceDto region = newValue.getRegion();
    final DistrictReferenceDto district = newValue.getDistrict();
    applyRegionAndDistrictFilterDependency(region, ContactCriteria.DISTRICT, district, ContactCriteria.COMMUNITY);
    final UserDto user = currentUserDto();
    ComboBox officerField = getField(ContactCriteria.CONTACT_OFFICER);
    if (user.getRegion() != null) {
        officerField.addItems(FacadeProvider.getUserFacade().getUsersByRegionAndRoles(user.getRegion(), UserRole.CONTACT_OFFICER));
    } else if (region != null) {
        officerField.addItems(FacadeProvider.getUserFacade().getUsersByRegionAndRoles(region, UserRole.CONTACT_OFFICER));
    } else {
        officerField.removeAllItems();
    }
    ComboBox birthDateDD = getField(ContactCriteria.BIRTHDATE_DD);
    if (getField(ContactCriteria.BIRTHDATE_YYYY).getValue() != null && getField(ContactCriteria.BIRTHDATE_MM).getValue() != null) {
        birthDateDD.addItems(DateHelper.getDaysInMonth((Integer) getField(ContactCriteria.BIRTHDATE_MM).getValue(), (Integer) getField(ContactCriteria.BIRTHDATE_YYYY).getValue()));
        birthDateDD.setEnabled(true);
    } else {
        birthDateDD.clear();
        birthDateDD.setEnabled(false);
    }
    // Date/Epi week filter
    HorizontalLayout dateFilterLayout = (HorizontalLayout) getMoreFiltersContainer().getComponent(WEEK_AND_DATE_FILTER);
    @SuppressWarnings("unchecked") EpiWeekAndDateFilterComponent<NewCaseDateType> weekAndDateFilter = (EpiWeekAndDateFilterComponent<NewCaseDateType>) dateFilterLayout.getComponent(0);
    ContactDateType contactDateType = newValue.getReportDateFrom() != null ? ContactDateType.REPORT_DATE : newValue.getLastContactDateFrom() != null ? ContactDateType.LAST_CONTACT_DATE : null;
    weekAndDateFilter.getDateTypeSelector().setValue(contactDateType);
    weekAndDateFilter.getDateFilterOptionFilter().setValue(newValue.getDateFilterOption());
    Date dateFrom = contactDateType == ContactDateType.REPORT_DATE ? newValue.getReportDateFrom() : contactDateType == ContactDateType.LAST_CONTACT_DATE ? newValue.getLastContactDateFrom() : null;
    Date dateTo = contactDateType == ContactDateType.REPORT_DATE ? newValue.getReportDateTo() : contactDateType == ContactDateType.LAST_CONTACT_DATE ? newValue.getLastContactDateTo() : null;
    if (DateFilterOption.EPI_WEEK.equals(newValue.getDateFilterOption())) {
        weekAndDateFilter.getWeekFromFilter().setValue(dateFrom == null ? null : DateHelper.getEpiWeek(dateFrom));
        weekAndDateFilter.getWeekToFilter().setValue(dateTo == null ? null : DateHelper.getEpiWeek(dateTo));
    } else {
        weekAndDateFilter.getDateFromFilter().setValue(dateFrom);
        weekAndDateFilter.getDateToFilter().setValue(dateTo);
    }
    if (StringUtils.isBlank(newValue.getEventLike())) {
        clearAndDisableFields(ContactCriteria.ONLY_CONTACTS_SHARING_EVENT_WITH_SOURCE_CASE);
    } else {
        enableFields(ContactCriteria.ONLY_CONTACTS_SHARING_EVENT_WITH_SOURCE_CASE);
    }
    ComboBox diseaseField = getField(ContactIndexDto.DISEASE);
    ComboBox diseaseVariantField = getField(ContactCriteria.DISEASE_VARIANT);
    Disease disease = (Disease) diseaseField.getValue();
    if (disease == null) {
        FieldHelper.updateItems(diseaseVariantField, Collections.emptyList());
        FieldHelper.setEnabled(false, diseaseVariantField);
    } else {
        List<DiseaseVariant> diseaseVariants = FacadeProvider.getCustomizableEnumFacade().getEnumValues(CustomizableEnumType.DISEASE_VARIANT, disease);
        FieldHelper.updateItems(diseaseVariantField, diseaseVariants);
        FieldHelper.setEnabled(CollectionUtils.isNotEmpty(diseaseVariants), diseaseVariantField);
    }
}

Example 4 with DiseaseVariant

use of de.symeda.sormas.api.disease.DiseaseVariant in project SORMAS-Project by hzi-braunschweig.

the class LabMessageMapperTest method testMigrateDiseaseVariant.

@Test
public void testMigrateDiseaseVariant() throws CustomEnumNotFoundException {
    CustomizableEnumFacadeEjb customizableEnumFacade = mock(CustomizableEnumFacadeEjb.class);
    LabMessageDto labMessage = LabMessageDto.build();
    labMessage.setTestedDisease(Disease.CORONAVIRUS);
    TestReportDto testReport = TestReportDto.build();
    LabMessageMapper mapper = LabMessageMapper.forLabMessage(labMessage);
    DiseaseVariant diseaseVariant = new DiseaseVariant();
    when(customizableEnumFacade.getEnumValue(CustomizableEnumType.DISEASE_VARIANT, "P.2", Disease.CORONAVIRUS)).thenReturn(diseaseVariant);
    when(customizableEnumFacade.getEnumValue(CustomizableEnumType.DISEASE_VARIANT, "NON-EXISTENT", Disease.CORONAVIRUS)).thenThrow(new CustomEnumNotFoundException("not found"));
    when(customizableEnumFacade.getEnumValue(CustomizableEnumType.DISEASE_VARIANT, null, Disease.CORONAVIRUS)).thenThrow(new CustomEnumNotFoundException("not found"));
    try (MockedStatic<FacadeProvider> facadeProvider = Mockito.mockStatic(FacadeProvider.class)) {
        facadeProvider.when(FacadeProvider::getCustomizableEnumFacade).thenReturn(customizableEnumFacade);
        // No disease variant set
        ImmutableTriple<String, DiseaseVariant, String> result = mapper.migrateDiseaseVariant(testReport);
        assertNull(result.getLeft());
        assertNull(result.getMiddle());
        assertNull(result.getRight());
        // Unknown disease variant set
        testReport.setTestedDiseaseVariant("NON-EXISTENT");
        result = mapper.migrateDiseaseVariant(testReport);
        assertEquals(I18nProperties.getPrefixCaption(PathogenTestDto.I18N_PREFIX, PathogenTestDto.TESTED_DISEASE_VARIANT) + ": NON-EXISTENT\n", result.getLeft());
        assertNull(result.getMiddle());
        assertNull(result.getRight());
        // Unknown disease variant and disease variant details set
        testReport.setTestedDiseaseVariantDetails("SOME-DETAILS");
        result = mapper.migrateDiseaseVariant(testReport);
        assertEquals(I18nProperties.getPrefixCaption(PathogenTestDto.I18N_PREFIX, PathogenTestDto.TESTED_DISEASE_VARIANT) + ": NON-EXISTENT\n" + I18nProperties.getPrefixCaption(PathogenTestDto.I18N_PREFIX, PathogenTestDto.TESTED_DISEASE_VARIANT_DETAILS) + ": SOME-DETAILS\n", result.getLeft());
        assertNull(result.getMiddle());
        assertNull(result.getRight());
        // Only disease variant details set
        testReport.setTestedDiseaseVariant(null);
        result = mapper.migrateDiseaseVariant(testReport);
        assertEquals(I18nProperties.getPrefixCaption(PathogenTestDto.I18N_PREFIX, PathogenTestDto.TESTED_DISEASE_VARIANT_DETAILS) + ": SOME-DETAILS\n", result.getLeft());
        assertNull(result.getMiddle());
        assertNull(result.getRight());
        // Known disease variant and disease variant details set
        testReport.setTestedDiseaseVariant("P.2");
        result = mapper.migrateDiseaseVariant(testReport);
        assertNull(result.getLeft());
        assertEquals(diseaseVariant, result.getMiddle());
        assertEquals("SOME-DETAILS", result.getRight());
        // Known disease variant set
        testReport.setTestedDiseaseVariantDetails(null);
        result = mapper.migrateDiseaseVariant(testReport);
        assertNull(result.getLeft());
        assertEquals(diseaseVariant, result.getMiddle());
        assertNull(result.getRight());
    }
}

Example 5 with DiseaseVariant

use of de.symeda.sormas.api.disease.DiseaseVariant in project SORMAS-Project by hzi-braunschweig.

the class PathogenTestEditActivity method saveData.

@Override
public void saveData() {
    if (saveTask != null) {
        NotificationHelper.showNotification(this, WARNING, getString(R.string.message_already_saving));
        // don't save multiple times
        return;
    }
    final PathogenTest pathogenTestToSave = getStoredRootEntity();
    final Case associatedCase = pathogenTestToSave.getSample().getAssociatedCase();
    if (associatedCase != null) {
        DiseaseVariant caseDiseaseVariant = associatedCase.getDiseaseVariant();
        DiseaseVariant newDiseaseVariant = pathogenTestToSave.getTestedDiseaseVariant();
        if (pathogenTestToSave.getTestResult() == PathogenTestResultType.POSITIVE && pathogenTestToSave.getTestResultVerified() && !DataHelper.equal(newDiseaseVariant, caseDiseaseVariant)) {
            String heading = I18nProperties.getString(Strings.headingUpdateCaseWithNewDiseaseVariant);
            String subHeading = I18nProperties.getString(Strings.messageUpdateCaseWithNewDiseaseVariant);
            int positiveButtonTextResId = R.string.yes;
            int negativeButtonTextResId = R.string.no;
            ConfirmationDialog dlg = new ConfirmationDialog(this, heading, subHeading, positiveButtonTextResId, negativeButtonTextResId);
            dlg.setCancelable(false);
            dlg.setNegativeCallback(() -> {
                save(pathogenTestToSave, associatedCase);
            });
            dlg.setPositiveCallback(() -> {
                associatedCase.setDiseaseVariant(newDiseaseVariant);
                try {
                    DatabaseHelper.getCaseDao().updateOrCreate(associatedCase);
                } catch (SQLException | java.sql.SQLException e) {
                    Log.e(getClass().getSimpleName(), "Could not update case: " + associatedCase.getUuid());
                    throw new RuntimeException(e);
                }
                save(pathogenTestToSave, associatedCase);
            });
            dlg.show();
        } else {
            save(pathogenTestToSave, associatedCase);
        }
    }
}